Variant report

Variant nsv828561
Chromosome Location chr19:43859394-43883620
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:43855800-43864200 Weak transcription Right Atrium heart
2 chr19:43858800-43859400 Active TSS Rectal Mucosa Donor 29 rectum
3 chr19:43859000-43859400 Enhancers Primary neutrophils fromperipheralblood blood
4 chr19:43859000-43860000 Enhancers Rectal Mucosa Donor 31 rectum
5 chr19:43859000-43864200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr19:43859400-43859600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
7 chr19:43859400-43860200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
8 chr19:43859600-43859800 Enhancers Rectal Mucosa Donor 29 rectum
9 chr19:43859800-43860000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
10 chr19:43859800-43860200 Enhancers HMEC breast
11 chr19:43860000-43860200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
12 chr19:43860000-43864200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr19:43860000-43864200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr19:43860200-43864000 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr19:43862800-43873200 Weak transcription Gastric stomach
16 chr19:43863000-43864200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr19:43864000-43864600 Enhancers ES-WA7 Cell Line embryonic stem cell
18 chr19:43864000-43864600 Genic enhancers Primary neutrophils fromperipheralblood blood
19 chr19:43864200-43864600 Bivalent Enhancer H9 Cell Line embryonic stem cell
20 chr19:43864200-43864600 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
21 chr19:43864200-43864600 Enhancers iPS-15b Cell Line embryonic stem cell
22 chr19:43864200-43864600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
23 chr19:43864200-43864600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
24 chr19:43864200-43864600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr19:43864200-43864600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
26 chr19:43864200-43864600 Enhancers Rectal Mucosa Donor 31 rectum
27 chr19:43864200-43864600 ZNF genes & repeats Right Atrium heart
28 chr19:43864600-43866200 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr19:43864600-43866400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr19:43864600-43866400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr19:43864600-43867600 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr19:43864600-43868000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr19:43864600-43868200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr19:43866000-43866400 ZNF genes & repeats Spleen Spleen
35 chr19:43866000-43867000 Bivalent Enhancer Fetal Stomach stomach
36 chr19:43866200-43866400 Bivalent Enhancer Fetal Muscle Trunk muscle
37 chr19:43866200-43867000 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
38 chr19:43866200-43867000 Enhancers Colonic Mucosa Colon
39 chr19:43866200-43867000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
40 chr19:43866200-43867000 Enhancers Osteobl bone
41 chr19:43866200-43867200 Enhancers NHLF lung
42 chr19:43866200-43867400 Enhancers Rectal Mucosa Donor 31 rectum
43 chr19:43866400-43866600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr19:43866400-43866800 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr19:43866400-43866800 Enhancers Sigmoid Colon Sigmoid Colon
46 chr19:43866400-43867000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
47 chr19:43866400-43867200 Enhancers Rectal Mucosa Donor 29 rectum
48 chr19:43866400-43868200 Weak transcription Spleen Spleen
49 chr19:43866600-43868000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr19:43866800-43868000 Weak transcription Sigmoid Colon Sigmoid Colon

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