Variant report

Variant	nsv829690
Chromosome Location	chr3:118205361-118378010
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1126)
CpG islands
(count:61)
Chromatin interactive
region (count:21)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1126 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:118263293-118263493	K562	blood:	n/a	n/a
2	ARID3A	chr3:118250028-118250228	K562	blood:	n/a	n/a
3	ARID3A	chr3:118259517-118259714	HepG2	liver:	n/a	n/a
4	ATF1	chr3:118249926-118250211	K562	blood:	n/a	n/a
5	ATF1	chr3:118263342-118263582	K562	blood:	n/a	n/a
6	ATF2	chr3:118306632-118307146	GM12878	blood:	n/a	n/a
7	BACH1	chr3:118219993-118220193	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr3:118263299-118263592	H1-hESC	embryonic stem cell:	n/a	n/a
9	BATF	chr3:118306730-118307061	GM12878	blood:	n/a	n/a
10	BATF	chr3:118245932-118246213	GM12878	blood:	n/a	n/a
11	BATF	chr3:118306778-118307105	GM12878	blood:	n/a	n/a
12	BATF	chr3:118324728-118324908	GM12878	blood:	n/a	n/a
13	BCL11A	chr3:118324720-118324922	GM12878	blood:	n/a	n/a
14	BCL11A	chr3:118306738-118307189	GM12878	blood:	n/a	n/a
15	BCLAF1	chr3:118352547-118352826	GM12878	blood:	n/a	n/a
16	BHLHE40	chr3:118263322-118263577	K562	blood:	n/a	n/a
17	BHLHE40	chr3:118352414-118352612	GM12878	blood:	n/a	n/a
18	BHLHE40	chr3:118348970-118348997	HepG2	liver:	n/a	n/a
19	BHLHE40	chr3:118347660-118347860	GM12878	blood:	n/a	n/a
20	BHLHE40	chr3:118207989-118208315	K562	blood:	n/a	n/a
21	BHLHE40	chr3:118348432-118348501	GM12878	blood:	n/a	n/a
22	BRCA1	chr3:118347651-118347851	H1-hESC	embryonic stem cell:	n/a	n/a
23	BRCA1	chr3:118347861-118347905	GM12878	blood:	n/a	n/a
24	BRCA1	chr3:118263830-118263839	HepG2	liver:	n/a	n/a
25	CBX3	chr3:118255395-118256113	HCT-116	colon:	n/a	n/a
26	CBX3	chr3:118255481-118256007	HCT-116	colon:	n/a	n/a
27	CBX3	chr3:118263187-118263822	HCT-116	colon:	n/a	n/a
28	CBX3	chr3:118263221-118263672	K562	blood:	n/a	n/a
29	CBX3	chr3:118263156-118263727	HCT-116	colon:	n/a	n/a
30	CCNT2	chr3:118249997-118250197	K562	blood:	n/a	n/a
31	CCNT2	chr3:118262690-118262963	K562	blood:	n/a	n/a
32	CCNT2	chr3:118249255-118249471	K562	blood:	n/a	n/a
33	CEBPB	chr3:118373107-118373394	A549	lung:	n/a	chr3:118373233-118373244 chr3:118373285-118373296
34	CEBPB	chr3:118257039-118257473	ECC-1	luminal epithelium:	n/a	chr3:118257224-118257235
35	CEBPB	chr3:118288417-118288735	HepG2	liver:	n/a	n/a
36	CEBPB	chr3:118256875-118257419	HepG2	liver:	n/a	chr3:118257224-118257235
37	CEBPB	chr3:118257035-118257408	K562	blood:	n/a	chr3:118257224-118257235
38	CEBPB	chr3:118257039-118257417	A549	lung:	n/a	chr3:118257224-118257235
39	CEBPB	chr3:118288462-118288757	A549	lung:	n/a	n/a
40	CEBPB	chr3:118256986-118257370	HCT-116	colon:	n/a	chr3:118257224-118257235
41	CEBPB	chr3:118373104-118373326	H1-hESC	embryonic stem cell:	n/a	chr3:118373233-118373244 chr3:118373285-118373296
42	CEBPB	chr3:118256913-118257422	IMR90	lung:	n/a	chr3:118257224-118257235
43	CEBPB	chr3:118373070-118373392	IMR90	lung:	n/a	chr3:118373233-118373244 chr3:118373285-118373296
44	CEBPB	chr3:118301424-118301461	H1-hESC	embryonic stem cell:	n/a	n/a
45	CEBPB	chr3:118256922-118257462	HCT-116	colon:	n/a	chr3:118257224-118257235
46	CEBPB	chr3:118257105-118257386	K562	blood:	n/a	chr3:118257224-118257235
47	CEBPB	chr3:118256905-118257518	K562	blood:	n/a	chr3:118257224-118257235
48	CEBPB	chr3:118373176-118373328	K562	blood:	n/a	chr3:118373233-118373244 chr3:118373285-118373296
49	CEBPB	chr3:118257001-118257473	ECC-1	luminal epithelium:	n/a	chr3:118257224-118257235
50	CEBPB	chr3:118257068-118257471	MCF-7	breast:	n/a	chr3:118257224-118257235

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:118230228-118230278	HRCEpiC	kidney:	n/a
2	chr3:118230228-118230278	HCT-116	colon:	n/a
3	chr3:118230228-118230278	SK-N-MC	brain:	n/a
4	chr3:118230228-118230278	Hela-S3	cervix:	n/a
5	chr3:118230228-118230278	AG04449	skin:	fetal
6	chr3:118230228-118230278	Hepatocyte	liver:	n/a
7	chr3:118230228-118230278	ovcar-3	ovarian:	n/a
8	chr3:118230228-118230278	SK-N-SH	brain:	n/a
9	chr3:118230228-118230278	A549	lung:	n/a
10	chr3:118230228-118230278	HL-60	blood:	n/a
11	chr3:118230228-118230278	AG10803	skin:	n/a
12	chr3:118230228-118230278	HepG2	liver:	n/a
13	chr3:118230228-118230278	HCPEpiC	choroid plexus:	n/a
14	chr3:118230228-118230278	PrEC	prostate:	n/a
15	chr3:118230228-118230278	NH-A	brain:	n/a
16	chr3:118230228-118230278	GM19239	blood:	n/a
17	chr3:118230228-118230278	GM12878	blood:	n/a
18	chr3:118230228-118230278	HCM	heart:	n/a
19	chr3:118230228-118230278	U87	brain:	n/a
20	chr3:118230228-118230278	GM06990	blood:	n/a
21	chr3:118230228-118230278	HIPEpiC	eye:	n/a
22	chr3:118230228-118230278	HNPCEpiC	eye:	n/a
23	chr3:118230228-118230278	MCF-7	breast:	n/a
24	chr3:118230228-118230278	T-47D	breast:	n/a
25	chr3:118230228-118230278	RPTEC	kidney:	n/a
26	chr3:118230228-118230278	ECC-1	luminal epithelium:	n/a
27	chr3:118230228-118230278	HCF	heart:	n/a
28	chr3:118230228-118230278	SAEC	small airway:	n/a
29	chr3:118230228-118230278	SKMC	muscle:	n/a
30	chr3:118230228-118230278	MCF10A-Er-Src	breast:	n/a
31	chr3:118230228-118230278	SK-N-SH_RA	brain:	n/a
32	chr3:118230228-118230278	LNCaP	prostate:	n/a
33	chr3:118230228-118230278	NT2-D1	testis:	n/a
34	chr3:118230228-118230278	HEK293	kidney:	embryo
35	chr3:118230228-118230278	CMK	blood:	n/a
36	chr3:118230228-118230278	AG09319	gingival:	n/a
37	chr3:118230228-118230278	K562	blood:	n/a
38	chr3:118230228-118230278	GM12892	blood:	n/a
39	chr3:118230228-118230278	Caco-2	colon:	n/a
40	chr3:118230228-118230278	BJ	skin:	n/a
41	chr3:118230228-118230278	H1-hESC	embryonic stem cell:	embryo
42	chr3:118230228-118230278	HAEpiC	amniotic membrane:	n/a
43	chr3:118230228-118230278	HUVEC	blood vessel:	n/a
44	chr3:118230228-118230278	HRE	kidney:	n/a
45	chr3:118230228-118230278	PANC-1	pancreas:	n/a
46	chr3:118230228-118230278	Jurkat	blood:	n/a
47	chr3:118230228-118230278	HRPEpiC	eye:	n/a
48	chr3:118230228-118230278	NB4	blood:	n/a
49	chr3:118230228-118230278	AoSMC	blood vessel:	n/a
50	chr3:118230228-118230278	AG04450	lung:	fetal

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:118347409..118350106-chr3:118352060..118353561,2	K562	blood:
2	chr3:118299339..118301462-chr3:118336394..118337945,2	K562	blood:
3	chr3:118347309..118348273-chr3:118536255..118536838,3	K562	blood:
4	chr3:116737919..116738534-chr3:118347341..118347998,2	MCF-7	breast:
5	chr3:118347409..118350106-chr3:118352060..118353561,2	K562	blood:
6	chr3:118355470..118356286-chr3:118536397..118537076,2	MCF-7	breast:
7	chr3:118298695..118301642-chr3:118304781..118307497,2	K562	blood:
8	chr3:118298695..118301642-chr3:118304781..118307497,2	K562	blood:
9	chr3:118363907..118366205-chr3:118367302..118368823,2	MCF-7	breast:
10	chr3:118297346..118300195-chr3:118305153..118307497,2	K562	blood:
11	chr3:118252852..118255833-chr3:118258614..118260871,2	K562	blood:
12	chr3:117716330..117717061-chr3:118347294..118348093,2	MCF-7	breast:
13	chr3:118243605..118245173-chr3:118245346..118246998,2	MCF-7	breast:
14	chr3:118252852..118255833-chr3:118258614..118260871,2	K562	blood:
15	chr3:118347698..118348225-chr3:118536287..118537041,3	MCF-7	breast:
16	chr3:118243605..118245173-chr3:118245346..118246998,2	MCF-7	breast:
17	chr3:118363907..118366205-chr3:118367302..118368823,2	MCF-7	breast:
18	chr3:118356253..118358904-chr3:118360115..118361706,2	MCF-7	breast:
19	chr3:118297346..118300195-chr3:118305153..118307497,2	K562	blood:
20	chr3:118299339..118301462-chr3:118336394..118337945,2	K562	blood:
21	chr3:118356253..118358904-chr3:118360115..118361706,2	MCF-7	breast:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IGSF11-1	chr3:118276444-118276515	ENSG00000243276
2	lnc-C3orf30-2	chr3:118207645-118207872	XLOC_002775
3	lnc-C3orf30-2	chr3:118210387-118210569	XLOC_002775
4	lnc-C3orf30-2	chr3:118210387-118210569	XLOC_002775
5	lnc-C3orf30-2	chr3:118215386-118215620	XLOC_002775
6	lnc-C3orf30-2	chr3:118210387-118210606	XLOC_002775
7	lnc-IGSF11-1	chr3:118277906-118277936	NONHSAT091368
8	lnc-C3orf30-2	chr3:118212387-118212448	XLOC_002775
9	lnc-IGSF11-1	chr3:118227258-118227539	ENSG00000243276
10	lnc-C3orf30-2	chr3:118212387-118212653	XLOC_002775
11	lnc-IGSF11-1	chr3:118269667-118269771	ENSG00000243276
12	lnc-IGSF11-1	chr3:118276444-118276514	ENSG00000243276
13	lnc-IGSF11-1	chr3:118276444-118276514	NONHSAT091368
14	lnc-IGSF11-1	chr3:118269667-118269771	NONHSAT091367
15	lnc-C3orf30-2	chr3:118207720-118207872	NONHSAT091366
16	lnc-IGSF11-1	chr3:118226983-118227539	NONHSAT091367
17	lnc-C3orf30-2	chr3:118210387-118210571	NONHSAT091366
18	lnc-C3orf30-2	chr3:118212387-118212412	NONHSAT091366
19	lnc-IGSF11-1	chr3:118269667-118269771	NONHSAT091368
20	lnc-IGSF11-1	chr3:118269667-118269771	ENSG00000243276
21	lnc-C3orf30-2	chr3:118207654-118207881	XLOC_002775
22	lnc-IGSF11-1	chr3:118215470-118215524	ENSG00000243276
23	lnc-C3orf30-2	chr3:118207654-118207872	XLOC_002775
24	lnc-IGSF11-1	chr3:118227304-118227539	NONHSAT091368
25	lnc-C3orf30-2	chr3:118207645-118207872	XLOC_002775
26	lnc-C3orf30-2	chr3:118210387-118210606	XLOC_002775

No data

Variant related genes	Relation type
ENSG00000243276	TF binding region
ENSG00000243276	CpG island
ENSG00000239268	chromatin interactions
MRS2	miRNA target sites
NFE2L2	miRNA target sites
MRPL19	miRNA target sites
NOTCH1	miRNA target sites

Extended variants
information (count: 5787 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:5787 , 50 per page) page: 1 2 3 4 5 6 7 ... 116

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs574262895	chr3:118205411-118205412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs535010003	chr3:118205472-118205473	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs553452969	chr3:118205480-118205481	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs577126654	chr3:118205502-118205503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs564678822	chr3:118205506-118205507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs578130775	chr3:118205508-118205509	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs528762581	chr3:118205509-118205510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs545554069	chr3:118205554-118205555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs563789301	chr3:118205652-118205653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs575369184	chr3:118205686-118205687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs542462183	chr3:118205696-118205697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs548397164	chr3:118205741-118205742	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs528414931	chr3:118205783-118205784	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs373870330	chr3:118205785-118205786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs370938732	chr3:118205787-118205788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs546184850	chr3:118205841-118205842	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs141468828	chr3:118205845-118205846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs532058947	chr3:118205875-118205876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs550225145	chr3:118205893-118205894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs568879799	chr3:118205932-118205933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs537603911	chr3:118205935-118205936	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs539565000	chr3:118205947-118205948	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs62274830	chr3:118205956-118205957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs368628594	chr3:118205961-118205962	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs73857421	chr3:118205964-118205965	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs553475286	chr3:118206086-118206087	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs535370149	chr3:118206098-118206099	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs542095977	chr3:118206116-118206117	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs553391274	chr3:118206148-118206149	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs571635120	chr3:118206174-118206175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs180912743	chr3:118206182-118206183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs557444983	chr3:118206241-118206242	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs575657768	chr3:118206245-118206246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs377342153	chr3:118206247-118206248	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs544487810	chr3:118206249-118206250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs139261636	chr3:118206257-118206258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs368981781	chr3:118206271-118206272	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs184926311	chr3:118206275-118206276	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs189867856	chr3:118206288-118206289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs181465746	chr3:118206326-118206327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs543805857	chr3:118206371-118206372	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs546141921	chr3:118206407-118206408	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs7631113	chr3:118206467-118206468	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs535822948	chr3:118206473-118206474	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs368815948	chr3:118206483-118206484	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs542473127	chr3:118206511-118206512	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs116350603	chr3:118206517-118206518	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs562256243	chr3:118206518-118206519	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs1520125	chr3:118206529-118206530	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs375009345	chr3:118206575-118206576	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Developmental delay	22180640	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	17550852	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
Myelofibrosis	22110671	CNVD
Characteristic facial feature	22180640	CNVD
hypoplastic male genitals	22180640	CNVD
postnatal overgrowth	22180640	CNVD
lymphocytic leukemia	21291569	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Cancer	20164919	CNVD
early-passage human iPS cells	21368824	CNVD
Cancer	21272361	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:426 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:118200800-118207600	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr3:118202200-118207600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr3:118202600-118207200	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr3:118205200-118205400	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr3:118205200-118205400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr3:118205400-118206400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr3:118206400-118208400	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr3:118207000-118208200	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr3:118207200-118208200	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr3:118207200-118209400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr3:118207400-118208200	Enhancers	HMEC	breast
12	chr3:118207400-118208400	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr3:118207600-118208000	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr3:118207600-118208200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr3:118207600-118208400	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr3:118207800-118208200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr3:118207800-118208200	Enhancers	Hela-S3	cervix
18	chr3:118207800-118208400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr3:118208000-118208200	Enhancers	H9 Cell Line	embryonic stem cell
20	chr3:118208200-118212800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr3:118208400-118223400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr3:118208800-118209400	Enhancers	Colon Smooth Muscle	Colon
23	chr3:118210800-118220000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr3:118214400-118214800	Enhancers	GM12878-XiMat	blood
25	chr3:118215800-118216400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr3:118215800-118216600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr3:118216200-118216600	Enhancers	iPS-20b Cell Line	embryonic stem cell
28	chr3:118216600-118219600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr3:118216600-118219800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr3:118217800-118218000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr3:118218000-118219400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr3:118218200-118220000	Enhancers	Colon Smooth Muscle	Colon
33	chr3:118218200-118222000	Enhancers	Brain Germinal Matrix	brain
34	chr3:118218800-118221600	Enhancers	Cortex derived primary cultured neurospheres	brain
35	chr3:118219400-118221000	Enhancers	Fetal Stomach	stomach
36	chr3:118219400-118221200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr3:118219400-118221800	Enhancers	Fetal Lung	lung
38	chr3:118219600-118219800	Enhancers	Stomach Smooth Muscle	stomach
39	chr3:118219600-118220000	Enhancers	Brain Hippocampus Middle	brain
40	chr3:118219600-118221000	Enhancers	Rectal Smooth Muscle	rectum
41	chr3:118219600-118221200	Enhancers	ES-I3 Cell Line	embryonic stem cell
42	chr3:118219600-118221200	Enhancers	HUES48 Cell Line	embryonic stem cell
43	chr3:118219600-118221200	Enhancers	iPS-18 Cell Line	embryonic stem cell
44	chr3:118219600-118221200	Enhancers	iPS-20b Cell Line	embryonic stem cell
45	chr3:118219600-118221800	Enhancers	Breast Myoepithelial Primary Cells	Breast
46	chr3:118219800-118220200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr3:118219800-118220200	Enhancers	Fetal Heart	heart
48	chr3:118219800-118220400	Enhancers	Brain Angular Gyrus	brain
49	chr3:118219800-118220400	Enhancers	Brain Cingulate Gyrus	brain
50	chr3:118219800-118220400	Flanking Active TSS	Stomach Smooth Muscle	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links