Variant report

Variant nsv829877
Chromosome Location chr4:20847465-20992544
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:233 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:20834800-20850800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr4:20842400-20849000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr4:20846400-20848200 Weak transcription HMEC breast
4 chr4:20846400-20848200 Weak transcription NHEK skin
5 chr4:20846400-20848400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr4:20847000-20848200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr4:20847200-20853400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr4:20848200-20849600 Enhancers HMEC breast
9 chr4:20848200-20849800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr4:20848200-20849800 Enhancers NHEK skin
11 chr4:20848400-20849400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr4:20849000-20849400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr4:20853400-20853600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr4:20853400-20853600 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr4:20853600-20861800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr4:20855600-20855800 Active TSS Lung lung
17 chr4:20855800-20857000 Weak transcription Lung lung
18 chr4:20857000-20857200 Enhancers Lung lung
19 chr4:20857600-20858600 Enhancers HUVEC blood vessel
20 chr4:20858000-20858400 Enhancers Primary T helper 17 cells PMA-I stimulated --
21 chr4:20860200-20860600 Enhancers HSMMtube muscle
22 chr4:20860600-20861000 Weak transcription HSMMtube muscle
23 chr4:20860600-20862000 Enhancers NHEK skin
24 chr4:20860800-20861200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr4:20861000-20861200 Enhancers HSMMtube muscle
26 chr4:20861000-20862800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr4:20861200-20862000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr4:20861200-20862400 Weak transcription HSMMtube muscle
29 chr4:20861800-20862000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr4:20862000-20862400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr4:20862000-20862400 Weak transcription NHEK skin
32 chr4:20862000-20862800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr4:20862400-20862800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr4:20862400-20862800 Enhancers NHEK skin
35 chr4:20862400-20863200 Enhancers HSMMtube muscle
36 chr4:20862800-20863200 Enhancers Placenta Amnion Placenta Amnion
37 chr4:20871800-20872600 Enhancers HSMMtube muscle
38 chr4:20872400-20873200 Enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr4:20883600-20887000 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr4:20883800-20884000 Enhancers Ovary ovary
41 chr4:20883800-20884400 Active TSS Brain Cingulate Gyrus brain
42 chr4:20884000-20884400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr4:20884000-20884400 Active TSS Brain Hippocampus Middle brain
44 chr4:20884000-20884600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
45 chr4:20884000-20884600 Active TSS Brain Anterior Caudate brain
46 chr4:20884000-20884600 Active TSS Ovary ovary
47 chr4:20884200-20884400 Enhancers Brain Inferior Temporal Lobe brain
48 chr4:20887200-20891600 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr4:20891400-20891800 Enhancers HUES6 Cell Line embryonic stem cell
50 chr4:20891600-20892000 Enhancers ES-I3 Cell Line embryonic stem cell

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