Variant report

Variant	nsv829984
Chromosome Location	chr4:81979988-82113977
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:82085837-82086174	HepG2	liver:	n/a	n/a
2	ARID3A	chr4:81991005-81991235	K562	blood:	n/a	n/a
3	BACH1	chr4:82051781-82052102	H1-hESC	embryonic stem cell:	n/a	n/a
4	BCL3	chr4:82005799-82006080	GM12878	blood:	n/a	n/a
5	BHLHE40	chr4:81990990-81991205	K562	blood:	n/a	n/a
6	BHLHE40	chr4:81981513-81981604	GM12878	blood:	n/a	n/a
7	CBX3	chr4:82085623-82086725	HCT-116	colon:	n/a	n/a
8	CBX3	chr4:82085556-82086383	HCT-116	colon:	n/a	n/a
9	CEBPB	chr4:81990976-81991287	IMR90	lung:	n/a	n/a
10	CEBPB	chr4:82086027-82086560	A549	lung:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086378-82086389
11	CEBPB	chr4:82086212-82086523	K562	blood:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086378-82086389
12	CEBPB	chr4:82063761-82064331	ECC-1	luminal epithelium:	n/a	n/a
13	CEBPB	chr4:81987072-81987325	K562	blood:	n/a	chr4:81987187-81987198 chr4:81987188-81987199
14	CEBPB	chr4:82007633-82007733	HepG2	liver:	n/a	chr4:82007666-82007677
15	CEBPB	chr4:82074561-82074853	HepG2	liver:	n/a	chr4:82074711-82074722
16	CEBPB	chr4:81987076-81987329	HepG2	liver:	n/a	chr4:81987187-81987198 chr4:81987188-81987199
17	CEBPB	chr4:82085507-82086722	HCT-116	colon:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086625-82086633 chr4:82086378-82086389
18	CEBPB	chr4:82063806-82064172	IMR90	lung:	n/a	n/a
19	CEBPB	chr4:82000708-82000860	H1-hESC	embryonic stem cell:	n/a	n/a
20	CEBPB	chr4:82033003-82033503	Hela-S3	cervix:	n/a	chr4:82033434-82033445
21	CEBPB	chr4:81982546-81982853	HepG2	liver:	n/a	chr4:81982682-81982693
22	CEBPB	chr4:82010104-82010444	HepG2	liver:	n/a	chr4:82010272-82010283
23	CEBPB	chr4:82074514-82075285	Hela-S3	cervix:	n/a	chr4:82074711-82074722
24	CEBPB	chr4:82074459-82075024	HCT-116	colon:	n/a	chr4:82074711-82074722
25	CEBPB	chr4:82085861-82086571	IMR90	lung:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086378-82086389
26	CEBPB	chr4:82074547-82074935	K562	blood:	n/a	chr4:82074711-82074722
27	CEBPB	chr4:82086203-82086561	HepG2	liver:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086378-82086389
28	CEBPB	chr4:82057443-82057816	IMR90	lung:	n/a	chr4:82057770-82057782
29	CEBPB	chr4:82074649-82074981	H1-hESC	embryonic stem cell:	n/a	chr4:82074711-82074722
30	CEBPB	chr4:82074633-82074753	K562	blood:	n/a	chr4:82074711-82074722
31	CEBPB	chr4:81990954-81991250	H1-hESC	embryonic stem cell:	n/a	n/a
32	CEBPB	chr4:82085803-82086556	Hela-S3	cervix:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086378-82086389
33	CEBPB	chr4:81991005-81991283	K562	blood:	n/a	n/a
34	CEBPB	chr4:82056655-82056993	IMR90	lung:	n/a	n/a
35	CEBPB	chr4:82074615-82074968	A549	lung:	n/a	chr4:82074711-82074722
36	CEBPB	chr4:82010112-82010444	K562	blood:	n/a	chr4:82010272-82010283
37	CEBPB	chr4:82010127-82010410	H1-hESC	embryonic stem cell:	n/a	chr4:82010272-82010283
38	CEBPB	chr4:81990950-81991276	HepG2	liver:	n/a	n/a
39	CEBPB	chr4:82017745-82018073	HepG2	liver:	n/a	chr4:82017903-82017914
40	CEBPB	chr4:82074553-82075216	A549	lung:	n/a	chr4:82074711-82074722
41	CEBPB	chr4:81990961-81991273	K562	blood:	n/a	n/a
42	CEBPB	chr4:82063792-82064203	ECC-1	luminal epithelium:	n/a	n/a
43	CEBPB	chr4:82086162-82086552	A549	lung:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086378-82086389
44	CEBPB	chr4:82086264-82086554	H1-hESC	embryonic stem cell:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086378-82086389
45	CEBPB	chr4:82010122-82010444	IMR90	lung:	n/a	chr4:82010272-82010283
46	CEBPB	chr4:82085563-82086736	HCT-116	colon:	n/a	chr4:82086380-82086391 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086380-82086389 chr4:82086378-82086391 chr4:82086380-82086389 chr4:82086625-82086633 chr4:82086378-82086389
47	CEBPB	chr4:81993187-81993491	HepG2	liver:	n/a	chr4:81993327-81993338 chr4:81993326-81993339 chr4:81993326-81993337
48	CEBPB	chr4:82094458-82094784	IMR90	lung:	n/a	n/a
49	CEBPB	chr4:82074612-82074921	A549	lung:	n/a	chr4:82074711-82074722
50	CEBPB	chr4:82074570-82074889	IMR90	lung:	n/a	chr4:82074711-82074722

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:82075178-82075228	H1-hESC	embryonic stem cell:	embryo
2	chr4:82058885-82058935	SKMC	muscle:	n/a
3	chr4:82005992-82006042	NHDF-neo	bronchial:	n/a
4	chr4:82086282-82086332	HL-60	blood:	n/a
5	chr4:81991102-81991152	K562	blood:	n/a
6	chr4:82058885-82058935	HMEC	breast:	n/a
7	chr4:81991102-81991152	HL-60	blood:	n/a
8	chr4:82075178-82075228	ECC-1	luminal epithelium:	n/a
9	chr4:82058885-82058935	HCT-116	colon:	n/a
10	chr4:81991102-81991152	HEEpiC	esophagus:	n/a
11	chr4:82086282-82086332	NHDF-neo	bronchial:	n/a
12	chr4:82005992-82006042	MCF10A-Er-Src	breast:	n/a
13	chr4:82075178-82075228	ovcar-3	ovarian:	n/a
14	chr4:82075193-82075243	HRPEpiC	eye:	n/a
15	chr4:82058885-82058935	HPAEpiC	pulmonary alveolar:	n/a
16	chr4:82075178-82075228	RPTEC	kidney:	n/a
17	chr4:82005992-82006042	HCPEpiC	choroid plexus:	n/a
18	chr4:82058885-82058935	IMR90	lung:	fetal
19	chr4:82057467-82057517	GM06990	blood:	n/a
20	chr4:82075178-82075228	GM12891	blood:	n/a
21	chr4:82075193-82075243	PrEC	prostate:	n/a
22	chr4:82057467-82057517	ProgFib	skin:	n/a
23	chr4:82086282-82086332	GM12878	blood:	n/a
24	chr4:82075193-82075243	SK-N-SH_RA	brain:	n/a
25	chr4:82086282-82086332	HPAEpiC	pulmonary alveolar:	n/a
26	chr4:82057467-82057517	HRE	kidney:	n/a
27	chr4:82075193-82075243	Hepatocyte	liver:	n/a
28	chr4:81991102-81991152	SK-N-SH_RA	brain:	n/a
29	chr4:82057467-82057517	GM12878	blood:	n/a
30	chr4:82075178-82075228	LNCaP	prostate:	n/a
31	chr4:82005992-82006042	GM19239	blood:	n/a
32	chr4:82086282-82086332	HRE	kidney:	n/a
33	chr4:82058885-82058935	HCM	heart:	n/a
34	chr4:82075178-82075228	HEK293	kidney:	embryo
35	chr4:81991102-81991152	AG04450	lung:	fetal
36	chr4:82086282-82086332	Jurkat	blood:	n/a
37	chr4:82086282-82086332	GM19239	blood:	n/a
38	chr4:82075178-82075228	CMK	blood:	n/a
39	chr4:82005992-82006042	RPTEC	kidney:	n/a
40	chr4:82058885-82058935	PFSK-1	brain:	n/a
41	chr4:81991102-81991152	T-47D	breast:	n/a
42	chr4:82086282-82086332	HepG2	liver:	n/a
43	chr4:81991102-81991152	HEK293	kidney:	embryo
44	chr4:82086282-82086332	GM06990	blood:	n/a
45	chr4:81991102-81991152	HCPEpiC	choroid plexus:	n/a
46	chr4:82057467-82057517	HAEpiC	amniotic membrane:	n/a
47	chr4:82075193-82075243	PANC-1	pancreas:	n/a
48	chr4:82086282-82086332	CMK	blood:	n/a
49	chr4:82057467-82057517	ECC-1	luminal epithelium:	n/a
50	chr4:82058885-82058935	GM12878	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:82059467..82061139-chr4:82061704..82063726,2	K562	blood:
2	chr4:82097023..82097768-chr9:106930130..106930952,2	MCF-7	breast:
3	chr4:82065868..82068422-chr4:82071657..82074453,2	MCF-7	breast:
4	chr4:81990848..81991586-chr4:82272501..82273236,3	K562	blood:
5	chr4:81990984..81991561-chr4:83122784..83123414,2	K562	blood:
6	chr4:82063053..82065453-chr4:82073118..82074621,2	MCF-7	breast:
7	chr4:81990624..81991565-chr4:82272517..82273470,4	MCF-7	breast:
8	chr4:82084510..82088075-chr4:82091925..82095103,3	K562	blood:
9	chr4:82062502..82064110-chr4:82066567..82068962,3	K562	blood:
10	chr4:82063053..82065453-chr4:82073118..82074621,2	MCF-7	breast:
11	chr4:81974080..81976056-chr4:81981350..81983878,2	K562	blood:
12	chr4:82062502..82064110-chr4:82066567..82068962,3	K562	blood:
13	chr4:82005126..82005787-chr4:82272560..82273161,2	MCF-7	breast:
14	chr4:82088098..82090265-chr4:82090553..82093282,2	K562	blood:
15	chr4:82005004..82005857-chr4:82272588..82273446,6	MCF-7	breast:
16	chr4:82073740..82075498-chr4:82082583..82084834,2	MCF-7	breast:
17	chr4:82044462..82047224-chr4:82065201..82067700,2	MCF-7	breast:
18	chr4:81975637..81977540-chr4:81988307..81990192,2	K562	blood:
19	chr4:82059467..82061139-chr4:82061704..82063726,2	K562	blood:
20	chr4:82088098..82090265-chr4:82090553..82093282,2	K562	blood:
21	chr4:81974556..81977423-chr4:81980691..81984332,3	K562	blood:
22	chr4:82060392..82065056-chr4:82072063..82075964,4	K562	blood:
23	chr4:81990998..81991602-chr4:82272501..82273357,5	MCF-7	breast:
24	chr4:82065868..82068422-chr4:82071657..82074453,2	MCF-7	breast:
25	chr4:81990594..81991584-chr4:82181118..82182501,8	MCF-7	breast:
26	chr4:82005105..82005858-chr4:82181508..82182280,3	MCF-7	breast:
27	chr4:82084510..82088075-chr4:82091925..82095103,3	K562	blood:
28	chr4:82044462..82047224-chr4:82065201..82067700,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BMP3-1	chr4:82096598-82096745	ENSG00000251059.1
2	lnc-BMP3-1	chr4:82095029-82095084	ENSG00000251059.1
3	lnc-BMP3-1	chr4:82097152-82097191	ENSG00000251059.1
4	lnc-BMP3-1	chr4:82094913-82095084	ENSG00000251059.1
5	lnc-BMP3-1	chr4:82086094-82086152	ENSG00000251059.1
6	lnc-BMP3-1	chr4:82113334-82113400	ENSG00000251059.1
7	lnc-BMP3-1	chr4:82113334-82113400	ENSG00000251059.1
8	lnc-BMP3-1	chr4:82096598-82096745	ENSG00000251059.1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	PRKG2	hsa-miR-1	chr4:82010544-82010566

Variant related genes	Relation type
PRKG2	TF binding region
ENSG00000251059	TF binding region
PRKG2	CpG island
ENSG00000251059	CpG island
ENSG00000251059	chromatin interactions
ENSG00000138669	chromatin interactions

Extended variants
information (count: 4810 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:4810 , 50 per page) page: 1 2 3 4 5 6 7 ... 97

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7659948	chr4:81979993-81979994	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs576713532	chr4:81980037-81980038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs146875718	chr4:81980105-81980106	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs148355798	chr4:81980125-81980126	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs191321044	chr4:81980205-81980206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs541141234	chr4:81980215-81980216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs564139885	chr4:81980219-81980220	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs374421209	chr4:81980254-81980255	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs141501874	chr4:81980337-81980338	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs563131072	chr4:81980340-81980341	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs73831284	chr4:81980353-81980354	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs548820891	chr4:81980409-81980410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs554022903	chr4:81980460-81980461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs35526103	chr4:81980485-81980486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs150439096	chr4:81980512-81980513	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs182693231	chr4:81980513-81980514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs188102386	chr4:81980555-81980556	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs570952601	chr4:81980595-81980596	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs539541051	chr4:81980621-81980622	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs17005036	chr4:81980646-81980647	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs77679252	chr4:81980661-81980662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs577008017	chr4:81980664-81980665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs565854716	chr4:81980721-81980722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs77323888	chr4:81980815-81980816	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs397994210	chr4:81980821-81980822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs192983943	chr4:81980838-81980839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs572698156	chr4:81980871-81980872	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs368011089	chr4:81980879-81980880	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs541670310	chr4:81980941-81980942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs558370357	chr4:81980943-81980944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs138202509	chr4:81980944-81980945	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs142814541	chr4:81980955-81980956	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs4693809	chr4:81980966-81980967	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs577811758	chr4:81980974-81980975	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs545148789	chr4:81981035-81981036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs559193641	chr4:81981042-81981043	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs528348773	chr4:81981067-81981068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs185284237	chr4:81981079-81981080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs59633314	chr4:81981085-81981086	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs372213538	chr4:81981104-81981105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs544638531	chr4:81981147-81981148	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs533468348	chr4:81981170-81981171	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs549964845	chr4:81981179-81981180	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs557142152	chr4:81981204-81981205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs190508407	chr4:81981251-81981252	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs535819090	chr4:81981254-81981255	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs73831286	chr4:81981260-81981261	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs566407714	chr4:81981276-81981277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs535329616	chr4:81981312-81981313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs192440437	chr4:81981318-81981319	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	21922591	CNVD
Parkinson disease	21956041	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelodysplastic syndrome	21251322	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	18414403	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
primary effusion lymphomas	17116491	CNVD
Gastric cancer	16891809	CNVD
Prostate cancer	16573809	CNVD
Myelofibrosis	22110671	CNVD
Neuroblastoma	21899760	CNVD
Myelodysplastic syndrome	18508791	CNVD
abnormal development	18461090	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:556 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81971600-81983000	Weak transcription	Ovary	ovary
2	chr4:81972000-81990800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr4:81973800-81990800	Weak transcription	Stomach Smooth Muscle	stomach
4	chr4:81974600-81982000	Weak transcription	Primary B cells from cord blood	blood
5	chr4:81981400-81982200	Enhancers	GM12878-XiMat	blood
6	chr4:81981800-81982400	Enhancers	Primary B cells from peripheral blood	blood
7	chr4:81982000-81982200	Enhancers	Primary B cells from cord blood	blood
8	chr4:81982200-81983000	Enhancers	Fetal Intestine Large	intestine
9	chr4:81982600-81983400	Enhancers	Liver	Liver
10	chr4:81983000-81983400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:81983000-81983400	Enhancers	Ovary	ovary
12	chr4:81983000-81983800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr4:81983800-81990800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr4:81986600-81986800	Enhancers	Rectal Smooth Muscle	rectum
15	chr4:81986800-81990800	Weak transcription	Rectal Smooth Muscle	rectum
16	chr4:81990600-81991400	Enhancers	NHDF-Ad	bronchial
17	chr4:81990800-81991000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr4:81990800-81991200	Enhancers	Ovary	ovary
19	chr4:81990800-81991200	Enhancers	NHLF	lung
20	chr4:81990800-81991400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr4:81990800-81991400	Enhancers	Brain Cingulate Gyrus	brain
22	chr4:81990800-81991400	Enhancers	Colon Smooth Muscle	Colon
23	chr4:81990800-81991400	Enhancers	Fetal Brain Female	brain
24	chr4:81990800-81991400	Enhancers	Rectal Smooth Muscle	rectum
25	chr4:81990800-81991400	Enhancers	Stomach Smooth Muscle	stomach
26	chr4:81998200-81998400	Enhancers	Fetal Heart	heart
27	chr4:81998200-82030000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr4:81999000-81999200	Enhancers	Fetal Heart	heart
29	chr4:82002600-82005400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr4:82003200-82003600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr4:82003600-82004000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr4:82003600-82006800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr4:82004000-82005600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr4:82004000-82017200	Weak transcription	Fetal Intestine Small	intestine
35	chr4:82004800-82007200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr4:82005400-82006200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr4:82005600-82006600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr4:82005600-82007000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr4:82005800-82019000	Weak transcription	Fetal Intestine Large	intestine
40	chr4:82006000-82006200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr4:82006200-82024800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr4:82006600-82006800	Enhancers	NHDF-Ad	bronchial
43	chr4:82006600-82014400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr4:82006800-82012000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr4:82006800-82024800	Weak transcription	NHDF-Ad	bronchial
46	chr4:82007200-82007600	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr4:82007600-82010400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr4:82010400-82011200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr4:82011200-82013400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr4:82012000-82012800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links