Variant report

Variant	nsv829999
Chromosome Location	chr4:86500257-86666019
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1165)
CpG islands
(count:122)
Chromatin interactive
region (count:49)
LncRNA
region (count:0)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:1165 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:86561179-86561485	K562	blood:	n/a	n/a
2	ARID3A	chr4:86501726-86502124	K562	blood:	n/a	n/a
3	ARID3A	chr4:86602507-86602716	K562	blood:	n/a	n/a
4	ARID3A	chr4:86502641-86502782	K562	blood:	n/a	n/a
5	ARID3A	chr4:86647786-86648067	K562	blood:	n/a	n/a
6	ARID3A	chr4:86664472-86664691	K562	blood:	n/a	n/a
7	ATF1	chr4:86501662-86502086	K562	blood:	n/a	n/a
8	ATF1	chr4:86525152-86525363	K562	blood:	n/a	n/a
9	ATF1	chr4:86647602-86647972	K562	blood:	n/a	n/a
10	ATF1	chr4:86561154-86561420	K562	blood:	n/a	n/a
11	ATF1	chr4:86602379-86602772	K562	blood:	n/a	n/a
12	ATF1	chr4:86646895-86647305	K562	blood:	n/a	n/a
13	ATF2	chr4:86531492-86532041	GM12878	blood:	n/a	n/a
14	ATF2	chr4:86623057-86623625	GM12878	blood:	n/a	n/a
15	ATF2	chr4:86646832-86647485	GM12878	blood:	n/a	n/a
16	ATF2	chr4:86628677-86629165	GM12878	blood:	n/a	n/a
17	ATF2	chr4:86622805-86623671	GM12878	blood:	n/a	n/a
18	ATF2	chr4:86647023-86647437	GM12878	blood:	n/a	n/a
19	ATF2	chr4:86653212-86653710	GM12878	blood:	n/a	n/a
20	ATF2	chr4:86653162-86653765	GM12878	blood:	n/a	n/a
21	ATF2	chr4:86628723-86629230	GM12878	blood:	n/a	n/a
22	ATF2	chr4:86581766-86582510	GM12878	blood:	n/a	n/a
23	ATF2	chr4:86581829-86582463	GM12878	blood:	n/a	n/a
24	ATF2	chr4:86531477-86532049	GM12878	blood:	n/a	n/a
25	ATF2	chr4:86524538-86525240	GM12878	blood:	n/a	n/a
26	ATF3	chr4:86664448-86664833	K562	blood:	n/a	n/a
27	ATF3	chr4:86501633-86501921	K562	blood:	n/a	n/a
28	BACH1	chr4:86664465-86664843	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr4:86664529-86664987	K562	blood:	n/a	n/a
30	BATF	chr4:86623055-86623224	GM12878	blood:	n/a	n/a
31	BATF	chr4:86646980-86647359	GM12878	blood:	n/a	chr4:86647104-86647114
32	BATF	chr4:86524615-86524928	GM12878	blood:	n/a	n/a
33	BATF	chr4:86531526-86532008	GM12878	blood:	n/a	n/a
34	BATF	chr4:86623282-86623496	GM12878	blood:	n/a	n/a
35	BATF	chr4:86653238-86653602	GM12878	blood:	n/a	n/a
36	BATF	chr4:86581968-86582338	GM12878	blood:	n/a	n/a
37	BATF	chr4:86628785-86629123	GM12878	blood:	n/a	n/a
38	BATF	chr4:86628866-86629055	GM12878	blood:	n/a	n/a
39	BATF	chr4:86528858-86529138	GM12878	blood:	n/a	n/a
40	BATF	chr4:86581967-86582392	GM12878	blood:	n/a	n/a
41	BATF	chr4:86623175-86623518	GM12878	blood:	n/a	n/a
42	BATF	chr4:86531532-86532009	GM12878	blood:	n/a	n/a
43	BATF	chr4:86653220-86653705	GM12878	blood:	n/a	n/a
44	BATF	chr4:86594751-86595043	GM12878	blood:	n/a	n/a
45	BATF	chr4:86524624-86524893	GM12878	blood:	n/a	n/a
46	BCL11A	chr4:86628753-86629164	GM12878	blood:	n/a	chr4:86628954-86628963
47	BCL11A	chr4:86581845-86582291	GM12878	blood:	n/a	n/a
48	BCL11A	chr4:86653301-86653598	GM12878	blood:	n/a	n/a
49	BCL11A	chr4:86646959-86647460	GM12878	blood:	n/a	n/a
50	BCL11A	chr4:86653279-86653602	GM12878	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:86597598-86597648	NHDF-neo	bronchial:	n/a
2	chr4:86594376-86594426	HIPEpiC	eye:	n/a
3	chr4:86594376-86594426	PANC-1	pancreas:	n/a
4	chr4:86597598-86597648	GM12878	blood:	n/a
5	chr4:86597598-86597648	SAEC	small airway:	n/a
6	chr4:86597598-86597648	AG04449	skin:	fetal
7	chr4:86597598-86597648	HAEpiC	amniotic membrane:	n/a
8	chr4:86597598-86597648	H1-hESC	embryonic stem cell:	embryo
9	chr4:86594376-86594426	AG09319	gingival:	n/a
10	chr4:86594376-86594426	SK-N-SH	brain:	n/a
11	chr4:86597598-86597648	NHBE	bronchial:	n/a
12	chr4:86594376-86594426	HAEpiC	amniotic membrane:	n/a
13	chr4:86597598-86597648	HUVEC	blood vessel:	n/a
14	chr4:86597598-86597648	PFSK-1	brain:	n/a
15	chr4:86594376-86594426	GM12878	blood:	n/a
16	chr4:86594376-86594426	GM12891	blood:	n/a
17	chr4:86594376-86594426	HCPEpiC	choroid plexus:	n/a
18	chr4:86597598-86597648	GM06990	blood:	n/a
19	chr4:86594376-86594426	SK-N-SH_RA	brain:	n/a
20	chr4:86597598-86597648	GM19239	blood:	n/a
21	chr4:86597598-86597648	RPTEC	kidney:	n/a
22	chr4:86594376-86594426	T-47D	breast:	n/a
23	chr4:86597598-86597648	NB4	blood:	n/a
24	chr4:86594376-86594426	ECC-1	luminal epithelium:	n/a
25	chr4:86594376-86594426	Caco-2	colon:	n/a
26	chr4:86597598-86597648	HIPEpiC	eye:	n/a
27	chr4:86597598-86597648	HRPEpiC	eye:	n/a
28	chr4:86597598-86597648	SK-N-MC	brain:	n/a
29	chr4:86597598-86597648	HCF	heart:	n/a
30	chr4:86597598-86597648	BE2_C	brain:	n/a
31	chr4:86597598-86597648	HPAEpiC	pulmonary alveolar:	n/a
32	chr4:86594376-86594426	GM06990	blood:	n/a
33	chr4:86594376-86594426	NB4	blood:	n/a
34	chr4:86594376-86594426	GM19239	blood:	n/a
35	chr4:86597598-86597648	SK-N-SH	brain:	n/a
36	chr4:86594376-86594426	Jurkat	blood:	n/a
37	chr4:86594376-86594426	PFSK-1	brain:	n/a
38	chr4:86597598-86597648	MCF10A-Er-Src	breast:	n/a
39	chr4:86597598-86597648	HEEpiC	esophagus:	n/a
40	chr4:86597598-86597648	SK-N-SH_RA	brain:	n/a
41	chr4:86594376-86594426	HEEpiC	esophagus:	n/a
42	chr4:86594376-86594426	HCM	heart:	n/a
43	chr4:86594376-86594426	HNPCEpiC	eye:	n/a
44	chr4:86594376-86594426	Hepatocyte	liver:	n/a
45	chr4:86597598-86597648	HCM	heart:	n/a
46	chr4:86594376-86594426	SAEC	small airway:	n/a
47	chr4:86594376-86594426	CMK	blood:	n/a
48	chr4:86597598-86597648	HL-60	blood:	n/a
49	chr4:86597598-86597648	A549	lung:	n/a
50	chr4:86597598-86597648	HRCEpiC	kidney:	n/a

(count:49 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:86560931..86563228-chr4:86565263..86567217,2	K562	blood:
2	chr4:86564011..86565733-chr4:86571511..86573715,2	K562	blood:
3	chr4:86501012..86504553-chr4:86506975..86511546,6	K562	blood:
4	chr4:86655699..86658214-chr4:86658665..86660389,2	K562	blood:
5	chr4:86562691..86565511-chr4:86569928..86573011,3	K562	blood:
6	chr4:86591944..86594677-chr4:86595648..86598100,2	MCF-7	breast:
7	chr4:86601656..86604190-chr4:86605693..86607869,2	K562	blood:
8	chr4:86591944..86594677-chr4:86595648..86598100,2	MCF-7	breast:
9	chr4:86493575..86496357-chr4:86507974..86509773,2	MCF-7	breast:
10	chr4:86501012..86504553-chr4:86506975..86511546,6	K562	blood:
11	chr4:86655699..86658214-chr4:86658665..86660389,2	K562	blood:
12	chr4:86559206..86561371-chr4:86567124..86569221,2	K562	blood:
13	chr4:86562691..86565511-chr4:86569928..86573011,3	K562	blood:
14	chr4:86591420..86593413-chr4:86595688..86598132,2	K562	blood:
15	chr4:86497193..86499819-chr4:86506263..86509883,3	K562	blood:
16	chr4:86559206..86561371-chr4:86567124..86569221,2	K562	blood:
17	chr4:86618422..86620662-chr4:86620874..86623828,2	K562	blood:
18	chr4:86655653..86657316-chr4:86662237..86664343,2	MCF-7	breast:
19	chr4:86636846..86639460-chr4:86646994..86650013,3	K562	blood:
20	chr4:86560931..86563228-chr4:86565263..86567217,2	K562	blood:
21	chr4:86532905..86534925-chr4:86538636..86540560,2	MCF-7	breast:
22	chr4:86532905..86534925-chr4:86538636..86540560,2	MCF-7	breast:
23	chr4:86657861..86659859-chr4:86661418..86663098,2	K562	blood:
24	chr4:86513228..86515931-chr4:86524636..86526481,2	K562	blood:
25	chr4:86569531..86572114-chr4:86574958..86577590,2	MCF-7	breast:
26	chr4:86521874..86524403-chr4:86535042..86537476,2	K562	blood:
27	chr4:86601656..86604190-chr4:86605693..86607869,2	K562	blood:
28	chr4:86497120..86498770-chr4:86499825..86502224,3	K562	blood:
29	chr4:86651967..86654284-chr4:86654909..86657180,2	K562	blood:
30	chr4:86498940..86503292-chr4:86514616..86519116,5	K562	blood:
31	chr4:86599190..86601552-chr4:86603029..86605951,2	K562	blood:
32	chr4:86657861..86659859-chr4:86661418..86663098,2	K562	blood:
33	chr4:86500513..86506066-chr4:86507580..86511443,7	K562	blood:
34	chr4:86614998..86617949-chr4:86618338..86620197,2	K562	blood:
35	chr4:86512935..86515242-chr4:86516112..86518859,2	K562	blood:
36	chr4:86591420..86593413-chr4:86595688..86598132,2	K562	blood:
37	chr4:86498940..86503292-chr4:86514616..86519116,5	K562	blood:
38	chr4:86512935..86515242-chr4:86516112..86518859,2	K562	blood:
39	chr4:86497689..86499255-chr4:86523106..86525131,2	K562	blood:
40	chr4:86636846..86639460-chr4:86646994..86650013,3	K562	blood:
41	chr4:86618422..86620662-chr4:86620874..86623828,2	K562	blood:
42	chr4:86599190..86601552-chr4:86603029..86605951,2	K562	blood:
43	chr4:86655653..86657316-chr4:86662237..86664343,2	MCF-7	breast:
44	chr4:86500513..86506066-chr4:86507580..86511443,7	K562	blood:
45	chr4:86651967..86654284-chr4:86654909..86657180,2	K562	blood:
46	chr4:86614998..86617949-chr4:86618338..86620197,2	K562	blood:
47	chr4:86521874..86524403-chr4:86535042..86537476,2	K562	blood:
48	chr4:86564011..86565733-chr4:86571511..86573715,2	K562	blood:
49	chr4:86569531..86572114-chr4:86574958..86577590,2	MCF-7	breast:

No data

miRNA name	Chromosome Location	mirBase accession
hsa-miR-4451	chr4:86643668-86643684	MIMAT0018973

No data

Variant related genes	Relation type
ARHGAP24	TF binding region
MIR4451	TF binding region
ARHGAP24	CpG island
MIR4451	CpG island
ENSG00000138639	chromatin interactions

Extended variants
information (count: 6352 )
Associated
traits (count: 77 )

Variant overlapped rSNPs/rCNVs (count:6352 , 50 per page) page: 1 2 3 4 5 6 7 ... 128

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs553712653	chr4:86500264-86500265	Weak transcription Enhancers Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs572228485	chr4:86500376-86500377	Weak transcription Enhancers Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs193267591	chr4:86500433-86500434	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs568083939	chr4:86500452-86500453	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs146173787	chr4:86500457-86500458	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs76338246	chr4:86500498-86500499	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs34200764	chr4:86500504-86500505	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs529074700	chr4:86500508-86500509	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs544227753	chr4:86500518-86500519	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs562776278	chr4:86500559-86500560	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs533223315	chr4:86500564-86500565	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs575921485	chr4:86500612-86500613	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs35770959	chr4:86500646-86500647	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs5859985	chr4:86500647-86500648	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs397778857	chr4:86500662-86500663	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs77954078	chr4:86500663-86500664	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs551414471	chr4:86500698-86500699	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs566450592	chr4:86500718-86500719	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs10021036	chr4:86500725-86500726	Weak transcription Strong transcription Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs113477185	chr4:86500738-86500739	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs185443923	chr4:86500771-86500772	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs375357367	chr4:86500775-86500776	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs137870878	chr4:86500893-86500894	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs538435396	chr4:86500925-86500926	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs200451514	chr4:86500941-86500942	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs554805181	chr4:86501050-86501051	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs571620469	chr4:86501087-86501088	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs141701808	chr4:86501144-86501145	Weak transcription Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs538917120	chr4:86501221-86501222	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs190546772	chr4:86501261-86501262	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs572091852	chr4:86501267-86501268	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs574786900	chr4:86501277-86501278	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs557805004	chr4:86501290-86501291	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs192238780	chr4:86501292-86501293	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs555045488	chr4:86501293-86501294	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs576413277	chr4:86501295-86501296	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs140863021	chr4:86501306-86501307	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs2624017	chr4:86501321-86501322	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs139925442	chr4:86501322-86501323	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs368363715	chr4:86501335-86501336	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs62315648	chr4:86501347-86501348	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs560226277	chr4:86501425-86501426	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs375434787	chr4:86501456-86501457	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs12501836	chr4:86501470-86501471	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
45	rs577383013	chr4:86501478-86501479	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs150534163	chr4:86501521-86501522	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs567362627	chr4:86501595-86501596	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs10023915	chr4:86501601-86501602	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs555144876	chr4:86501662-86501663	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs112149820	chr4:86501679-86501680	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:77)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Parkinson disease	21956041	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelodysplastic syndrome	21251322	CNVD
Multiple myeloma	17550852	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	18414403	CNVD
primary effusion lymphomas	17116491	CNVD
Prostate cancer	16573809	CNVD
Olfactory neuroblastoma	18408657	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
Myelofibrosis	22110671	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1405 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:86478000-86501000	Weak transcription	Right Ventricle	heart
2	chr4:86486000-86509200	Weak transcription	Left Ventricle	heart
3	chr4:86487000-86509200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr4:86487200-86521200	Weak transcription	HSMMtube	muscle
5	chr4:86488800-86512400	Weak transcription	Fetal Muscle Trunk	muscle
6	chr4:86492200-86502000	Strong transcription	Primary B cells from peripheral blood	blood
7	chr4:86492600-86501400	Weak transcription	Fetal Muscle Leg	muscle
8	chr4:86492600-86517000	Weak transcription	Adipose Nuclei	Adipose
9	chr4:86494400-86501200	Weak transcription	Primary B cells from cord blood	blood
10	chr4:86495000-86516200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:86495200-86512200	Weak transcription	NHDF-Ad	bronchial
12	chr4:86497200-86501200	Active TSS	K562	blood
13	chr4:86497400-86501200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr4:86497400-86516800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr4:86498800-86501200	Weak transcription	HSMM	muscle
16	chr4:86498800-86512400	Weak transcription	Psoas Muscle	Psoas
17	chr4:86499400-86500400	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr4:86501200-86501400	Enhancers	Right Ventricle	heart
19	chr4:86501200-86502000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr4:86501200-86502000	Strong transcription	Primary B cells from cord blood	blood
21	chr4:86501200-86502000	Strong transcription	HSMM	muscle
22	chr4:86501200-86502000	Flanking Active TSS	K562	blood
23	chr4:86501400-86502000	Strong transcription	Fetal Muscle Leg	muscle
24	chr4:86502000-86502800	Active TSS	K562	blood
25	chr4:86502000-86503600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr4:86502000-86505400	Weak transcription	Primary B cells from peripheral blood	blood
27	chr4:86502000-86506000	Weak transcription	Primary B cells from cord blood	blood
28	chr4:86502000-86511600	Weak transcription	Fetal Muscle Leg	muscle
29	chr4:86502000-86517200	Weak transcription	HSMM	muscle
30	chr4:86503600-86504400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr4:86504400-86512400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr4:86505400-86506400	ZNF genes & repeats	Primary B cells from peripheral blood	blood
33	chr4:86506000-86507400	ZNF genes & repeats	Primary B cells from cord blood	blood
34	chr4:86506400-86507400	Strong transcription	Primary B cells from peripheral blood	blood
35	chr4:86507400-86507600	Strong transcription	Primary B cells from cord blood	blood
36	chr4:86507400-86509200	Weak transcription	Primary B cells from peripheral blood	blood
37	chr4:86507600-86508800	Weak transcription	Primary B cells from cord blood	blood
38	chr4:86508800-86509400	Strong transcription	Primary B cells from cord blood	blood
39	chr4:86509000-86509400	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr4:86509000-86509400	Enhancers	Spleen	Spleen
41	chr4:86509000-86509400	Enhancers	K562	blood
42	chr4:86509200-86509400	Enhancers	Left Ventricle	heart
43	chr4:86509200-86509600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
44	chr4:86509200-86509600	Enhancers	Primary B cells from peripheral blood	blood
45	chr4:86509200-86509600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr4:86509200-86509800	Enhancers	H9 Cell Line	embryonic stem cell
47	chr4:86509400-86510000	Weak transcription	Left Ventricle	heart
48	chr4:86509400-86512400	Weak transcription	Primary B cells from cord blood	blood
49	chr4:86509600-86516000	Weak transcription	Primary B cells from peripheral blood	blood
50	chr4:86511200-86511400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links