Variant report

Variant	nsv830024
Chromosome Location	chr4:105884350-106037816
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1085)
CpG islands
(count:122)
Chromatin interactive
region (count:141)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1085 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:105944347-105944441	K562	blood:	n/a	n/a
2	ARID3A	chr4:105979485-105979722	K562	blood:	n/a	n/a
3	ARID3A	chr4:105992750-105992839	K562	blood:	n/a	n/a
4	ATF1	chr4:105944100-105944538	K562	blood:	n/a	n/a
5	ATF1	chr4:105982576-105982896	K562	blood:	n/a	n/a
6	ATF1	chr4:105979443-105979792	K562	blood:	n/a	n/a
7	ATF2	chr4:105978765-105980057	GM12878	blood:	n/a	n/a
8	ATF2	chr4:105981543-105983347	GM12878	blood:	n/a	n/a
9	ATF2	chr4:105981590-105983252	GM12878	blood:	n/a	n/a
10	ATF2	chr4:105980305-105981036	GM12878	blood:	n/a	n/a
11	ATF2	chr4:105887766-105888475	GM12878	blood:	n/a	n/a
12	ATF2	chr4:105887616-105888633	GM12878	blood:	n/a	n/a
13	ATF2	chr4:105978869-105979985	GM12878	blood:	n/a	n/a
14	ATF2	chr4:105894780-105895309	GM12878	blood:	n/a	n/a
15	ATF2	chr4:105980351-105980981	GM12878	blood:	n/a	n/a
16	BACH1	chr4:105982470-105982904	H1-hESC	embryonic stem cell:	n/a	n/a
17	BATF	chr4:105980319-105980870	GM12878	blood:	n/a	n/a
18	BATF	chr4:105984975-105985280	GM12878	blood:	n/a	n/a
19	BATF	chr4:105887697-105888544	GM12878	blood:	n/a	n/a
20	BATF	chr4:105996229-105996537	GM12878	blood:	n/a	n/a
21	BATF	chr4:105981722-105982281	GM12878	blood:	n/a	chr4:105982032-105982042
22	BATF	chr4:105981577-105982916	GM12878	blood:	n/a	chr4:105982032-105982042
23	BATF	chr4:105982523-105982866	GM12878	blood:	n/a	n/a
24	BATF	chr4:105996211-105996486	GM12878	blood:	n/a	n/a
25	BATF	chr4:105887707-105888267	GM12878	blood:	n/a	n/a
26	BATF	chr4:105980534-105980883	GM12878	blood:	n/a	n/a
27	BATF	chr4:105979218-105980044	GM12878	blood:	n/a	chr4:105979669-105979679 chr4:105979420-105979430 chr4:105979668-105979679
28	BATF	chr4:105979290-105980013	GM12878	blood:	n/a	chr4:105979669-105979679 chr4:105979420-105979430 chr4:105979668-105979679
29	BATF	chr4:105982944-105983348	GM12878	blood:	n/a	chr4:105983171-105983182
30	BCL11A	chr4:105887850-105888179	GM12878	blood:	n/a	n/a
31	BCL11A	chr4:105980480-105980845	GM12878	blood:	n/a	n/a
32	BCL11A	chr4:105980526-105980872	GM12878	blood:	n/a	n/a
33	BCL11A	chr4:105981582-105982873	GM12878	blood:	n/a	chr4:105982031-105982040 chr4:105982689-105982698
34	BCL11A	chr4:105981705-105982207	GM12878	blood:	n/a	chr4:105982031-105982040
35	BCL11A	chr4:105887851-105888211	GM12878	blood:	n/a	n/a
36	BCL11A	chr4:105979686-105979944	GM12878	blood:	n/a	chr4:105979779-105979788
37	BCL11A	chr4:105979599-105980015	GM12878	blood:	n/a	chr4:105979779-105979788
38	BCL3	chr4:105982479-105982799	GM12878	blood:	n/a	chr4:105982689-105982698
39	BCL3	chr4:105979596-105979986	GM12878	blood:	n/a	chr4:105979779-105979788
40	BCL3	chr4:105980531-105980769	GM12878	blood:	n/a	n/a
41	BCL3	chr4:105980373-105980934	GM12878	blood:	n/a	n/a
42	BCL3	chr4:105981688-105982224	GM12878	blood:	n/a	chr4:105982031-105982040
43	BCL3	chr4:105981789-105982170	GM12878	blood:	n/a	chr4:105982031-105982040
44	BCLAF1	chr4:105887629-105888655	GM12878	blood:	n/a	n/a
45	BCLAF1	chr4:105980237-105980956	GM12878	blood:	n/a	n/a
46	BCLAF1	chr4:105980446-105980931	GM12878	blood:	n/a	n/a
47	BCLAF1	chr4:105890600-105890958	GM12878	blood:	n/a	n/a
48	BCLAF1	chr4:105981605-105983227	GM12878	blood:	n/a	chr4:105982031-105982040 chr4:105982689-105982698
49	BCLAF1	chr4:105981632-105982285	GM12878	blood:	n/a	chr4:105982031-105982040
50	BHLHE40	chr4:105982276-105982844	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:105982613-105982663	NHDF-neo	bronchial:	n/a
2	chr4:105982613-105982663	HUVEC	blood vessel:	n/a
3	chr4:106009831-106009881	AG10803	skin:	n/a
4	chr4:105982613-105982663	NB4	blood:	n/a
5	chr4:105982613-105982663	HNPCEpiC	eye:	n/a
6	chr4:105982613-105982663	RPTEC	kidney:	n/a
7	chr4:105982613-105982663	HCF	heart:	n/a
8	chr4:106009831-106009881	SKMC	muscle:	n/a
9	chr4:105982613-105982663	MCF10A-Er-Src	breast:	n/a
10	chr4:105982613-105982663	HepG2	liver:	n/a
11	chr4:106009831-106009881	AG04449	skin:	fetal
12	chr4:105982613-105982663	Jurkat	blood:	n/a
13	chr4:106009831-106009881	Hepatocyte	liver:	n/a
14	chr4:106009831-106009881	HNPCEpiC	eye:	n/a
15	chr4:105982613-105982663	SKMC	muscle:	n/a
16	chr4:106009831-106009881	HEEpiC	esophagus:	n/a
17	chr4:106009831-106009881	NHDF-neo	bronchial:	n/a
18	chr4:105982613-105982663	AG04450	lung:	fetal
19	chr4:105982613-105982663	AoSMC	blood vessel:	n/a
20	chr4:106009831-106009881	IMR90	lung:	fetal
21	chr4:105982613-105982663	AG09319	gingival:	n/a
22	chr4:106009831-106009881	GM12892	blood:	n/a
23	chr4:106009831-106009881	SK-N-MC	brain:	n/a
24	chr4:106009831-106009881	U87	brain:	n/a
25	chr4:106009831-106009881	HRCEpiC	kidney:	n/a
26	chr4:106009831-106009881	Caco-2	colon:	n/a
27	chr4:105982613-105982663	ProgFib	skin:	n/a
28	chr4:106009831-106009881	NT2-D1	testis:	n/a
29	chr4:106009831-106009881	LNCaP	prostate:	n/a
30	chr4:106009831-106009881	HRPEpiC	eye:	n/a
31	chr4:105982613-105982663	PANC-1	pancreas:	n/a
32	chr4:106009831-106009881	GM12878	blood:	n/a
33	chr4:106009831-106009881	ECC-1	luminal epithelium:	n/a
34	chr4:105982613-105982663	GM12891	blood:	n/a
35	chr4:106009831-106009881	HRE	kidney:	n/a
36	chr4:106009831-106009881	HEK293	kidney:	embryo
37	chr4:105982613-105982663	AG04449	skin:	fetal
38	chr4:105982613-105982663	ovcar-3	ovarian:	n/a
39	chr4:105982613-105982663	Caco-2	colon:	n/a
40	chr4:105982613-105982663	ECC-1	luminal epithelium:	n/a
41	chr4:106009831-106009881	RPTEC	kidney:	n/a
42	chr4:105982613-105982663	HRCEpiC	kidney:	n/a
43	chr4:106009831-106009881	AG09309	skin:	n/a
44	chr4:105982613-105982663	PrEC	prostate:	n/a
45	chr4:106009831-106009881	AG09319	gingival:	n/a
46	chr4:106009831-106009881	HPAEpiC	pulmonary alveolar:	n/a
47	chr4:106009831-106009881	HCF	heart:	n/a
48	chr4:106009831-106009881	H1-hESC	embryonic stem cell:	embryo
49	chr4:105982613-105982663	SK-N-SH_RA	brain:	n/a
50	chr4:105982613-105982663	AG10803	skin:	n/a

(count:141 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr4:105890865..105893190-chr4:105904339..105905873,2	MCF-7	breast:
2	chr4:105980136..105985353-chr4:106046016..106051646,9	MCF-7	breast:
3	chr4:105883633..105885382-chr4:105888462..105890781,2	MCF-7	breast:
4	chr4:105896599..105898132-chr4:105980700..105982640,2	MCF-7	breast:
5	chr4:105817598..105818510-chr4:106037773..106038780,3	MCF-7	breast:
6	chr4:105829224..105829796-chr4:105892267..105893201,3	MCF-7	breast:
7	chr4:105883633..105885382-chr4:105888462..105890781,2	MCF-7	breast:
8	chr4:106029291..106031186-chr4:106039964..106041924,2	MCF-7	breast:
9	chr4:105908073..105910791-chr4:105912307..105914849,2	MCF-7	breast:
10	chr4:105987968..105989639-chr4:105996681..105999010,2	MCF-7	breast:
11	chr4:105415663..105417887-chr4:105981458..105983796,2	MCF-7	breast:
12	chr4:106017219..106019280-chr4:106021884..106024669,2	MCF-7	breast:
13	chr4:105899028..105901961-chr4:106066893..106069012,4	MCF-7	breast:
14	chr4:105907896..105909981-chr4:105942632..105945220,2	MCF-7	breast:
15	chr4:105825723..105826522-chr4:105892309..105893190,3	MCF-7	breast:
16	chr4:105892428..105893226-chr4:106047323..106048149,4	MCF-7	breast:
17	chr4:105890712..105892668-chr4:105935131..105936646,2	MCF-7	breast:
18	chr4:105895866..105898402-chr4:106048724..106052300,3	MCF-7	breast:
19	chr4:106008287..106010718-chr4:106060873..106063570,2	MCF-7	breast:
20	chr4:105979608..105981354-chr4:106032416..106034539,2	MCF-7	breast:
21	chr4:105986020..105988055-chr4:105988389..105993041,5	MCF-7	breast:
22	chr4:105884036..105898505-chr4:106054854..106072562,138	MCF-7	breast:
23	chr4:105984109..105986380-chr4:105994262..105997014,2	MCF-7	breast:
24	chr4:105986815..105988687-chr4:106044806..106047143,2	MCF-7	breast:
25	chr4:105836431..105838299-chr4:105892011..105894245,2	MCF-7	breast:
26	chr4:105829249..105833469-chr4:105980777..105984054,6	MCF-7	breast:
27	chr4:105990116..105992882-chr4:105997268..105998884,2	MCF-7	breast:
28	chr4:105828911..105829796-chr4:105892351..105893269,4	MCF-7	breast:
29	chr4:105785968..105787554-chr4:105888819..105890589,2	MCF-7	breast:
30	chr4:105981222..105983429-chr4:105984417..105986234,2	MCF-7	breast:
31	chr4:105979608..105981354-chr4:106032416..106034539,2	MCF-7	breast:
32	chr4:105812011..105813887-chr4:105981924..105984058,2	MCF-7	breast:
33	chr4:105928109..105929887-chr4:105931891..105933888,2	MCF-7	breast:
34	chr4:105891909..105893329-chr4:106047220..106048252,14	MCF-7	breast:
35	chr4:105907896..105909981-chr4:105942632..105945220,2	MCF-7	breast:
36	chr4:104944123..104945646-chr4:105884836..105887538,2	MCF-7	breast:
37	chr4:105890712..105892668-chr4:105935131..105936646,2	MCF-7	breast:
38	chr4:105817532..105819357-chr4:105891235..105892820,2	MCF-7	breast:
39	chr4:105980934..105983324-chr4:106203078..106205938,2	MCF-7	breast:
40	chr4:106022079..106026589-chr4:106064672..106069140,4	MCF-7	breast:
41	chr4:105981696..105984518-chr4:105989745..105992068,2	MCF-7	breast:
42	chr4:106017219..106019280-chr4:106021884..106024669,2	MCF-7	breast:
43	chr4:105801206..105803206-chr4:105890274..105893062,2	MCF-7	breast:
44	chr4:105825740..105826522-chr4:105892309..105892813,2	MCF-7	breast:
45	chr4:105982346..105984231-chr4:106059044..106061638,2	MCF-7	breast:
46	chr4:105817400..105818569-chr4:105892258..105893163,7	MCF-7	breast:
47	chr4:105990116..105992882-chr4:105997268..105998884,2	MCF-7	breast:
48	chr4:105883010..105897017-chr4:106062943..106072055,55	MCF-7	breast:
49	chr4:106013224..106015340-chr4:106027694..106030671,2	MCF-7	breast:
50	chr4:105893495..105895146-chr4:106393920..106395691,2	MCF-7	breast:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TET2-2	chr4:105982384-105982631	ENSG00000248373
2	lnc-PPA2-10	chr4:105982384-105982631	NONHSAT097659
3	lnc-PPA2-10	chr4:105890402-105890504	NONHSAT097659
4	lnc-TET2-2	chr4:105891074-105891241	XLOC_003633
5	lnc-TET2-2	chr4:105982384-105982631	ENSG00000248373
6	lnc-CXXC4-1	chr4:105887765-105887950	ENSG00000248242.1
7	lnc-PPA2-10	chr4:105890864-105891241	NONHSAT097659
8	lnc-CXXC4-1	chr4:105887177-105887238	ENSG00000248242.1
9	lnc-TET2-2	chr4:105890402-105890504	XLOC_003633
10	lnc-TET2-2	chr4:105890402-105890504	ENSG00000248373
11	lnc-TET2-2	chr4:105894869-105894939	ENSG00000248373
12	lnc-PPA2-10	chr4:106032165-106032404	NONHSAT097659

No data

Variant related genes	Relation type
ENSG00000251473	TF binding region
ENSG00000252136	TF binding region
RNU6-351P	TF binding region
ENSG00000248242	TF binding region
ENSG00000248373	TF binding region
ENSG00000251473	CpG island
ENSG00000252136	CpG island
RNU6-351P	CpG island
ENSG00000248242	CpG island
ENSG00000248373	CpG island
ENSG00000168769	chromatin interactions
ENSG00000248373	chromatin interactions
ENSG00000251259	chromatin interactions
ENSG00000168772	chromatin interactions
ENSG00000248242	chromatin interactions
ENSG00000252136	chromatin interactions
ENSG00000138777	chromatin interactions
ENSG00000251906	chromatin interactions
ENSG00000244470	chromatin interactions
ENSG00000145675	chromatin interactions

Extended variants
information (count: 3574 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:3574 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs543691749	chr4:105884436-105884437	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs1490585	chr4:105884457-105884458	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs145590061	chr4:105884556-105884557	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs549097581	chr4:105884614-105884615	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs187046002	chr4:105884622-105884623	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs147316000	chr4:105884670-105884671	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs141040877	chr4:105884694-105884695	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs571607797	chr4:105884700-105884701	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs142487204	chr4:105884827-105884828	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs551277291	chr4:105884839-105884840	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs567893976	chr4:105884916-105884917	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs77862220	chr4:105884962-105884963	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs536853918	chr4:105884988-105884989	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs553577371	chr4:105885010-105885011	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs572175827	chr4:105885032-105885033	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs534673996	chr4:105885068-105885069	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs191695279	chr4:105885072-105885073	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs577563704	chr4:105885086-105885087	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs543376641	chr4:105885120-105885121	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs112153320	chr4:105885122-105885123	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs556819343	chr4:105885151-105885152	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs3055774	chr4:105885162-105885163	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs573563106	chr4:105885198-105885199	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs150934397	chr4:105885206-105885207	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs140745980	chr4:105885218-105885219	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs545483324	chr4:105885259-105885260	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs565735235	chr4:105885292-105885293	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs71599033	chr4:105885309-105885310	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs183589024	chr4:105885311-105885312	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs188130780	chr4:105885340-105885341	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs567983470	chr4:105885375-105885376	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs116164167	chr4:105885531-105885532	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs191663665	chr4:105885551-105885552	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs113864600	chr4:105885568-105885569	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs547224128	chr4:105885615-105885616	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs111877026	chr4:105885650-105885651	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs149692297	chr4:105885682-105885683	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs146703541	chr4:105885778-105885779	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs368225013	chr4:105885781-105885782	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs571186466	chr4:105885800-105885801	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs543722450	chr4:105885807-105885808	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs369941889	chr4:105885846-105885847	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs182212954	chr4:105885872-105885873	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs372105120	chr4:105885873-105885874	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs573599477	chr4:105885915-105885916	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs542506125	chr4:105885947-105885948	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs186489531	chr4:105885951-105885952	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs572974091	chr4:105886041-105886042	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs545208902	chr4:105886046-105886047	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs565395229	chr4:105886047-105886048	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20459617	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	16573809	CNVD
Multiple myeloma	16616336	CNVD
Melanoma	20688739	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	18000384	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Myelofibrosis	22110671	CNVD
myeloid cancer	21057493	CNVD
Cognitive impairment	21505072	CNVD
Acute myeloid leukemia	21251322	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Chronic lymphocytic leukemia	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:643 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:105884000-105885200	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr4:105884600-105885600	Enhancers	Esophagus	oesophagus
3	chr4:105884800-105886000	ZNF genes & repeats	GM12878-XiMat	blood
4	chr4:105884800-105887600	Weak transcription	Stomach Mucosa	stomach
5	chr4:105885200-105885400	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr4:105885200-105886000	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr4:105885200-105887000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr4:105885200-105887800	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr4:105885400-105885600	Enhancers	Rectal Mucosa Donor 29	rectum
10	chr4:105885400-105885800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
11	chr4:105885600-105885800	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr4:105885600-105885800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr4:105885600-105886600	Weak transcription	Esophagus	oesophagus
14	chr4:105885800-105886000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr4:105885800-105886000	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr4:105885800-105887000	Weak transcription	Rectal Mucosa Donor 29	rectum
17	chr4:105886000-105886200	Weak transcription	GM12878-XiMat	blood
18	chr4:105886000-105886600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr4:105886000-105887000	Weak transcription	Primary monocytes fromperipheralblood	blood
20	chr4:105886000-105887000	Weak transcription	Monocytes-CD14+_RO01746	blood
21	chr4:105886200-105887400	Flanking Active TSS	GM12878-XiMat	blood
22	chr4:105886600-105887000	Enhancers	Rectal Mucosa Donor 31	rectum
23	chr4:105886600-105887600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr4:105887000-105887200	Enhancers	Rectal Mucosa Donor 29	rectum
25	chr4:105887000-105887400	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr4:105887000-105887600	Enhancers	Monocytes-CD14+_RO01746	blood
27	chr4:105887000-105888600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr4:105887000-105889000	Enhancers	Primary monocytes fromperipheralblood	blood
29	chr4:105887200-105888400	Active TSS	Rectal Mucosa Donor 29	rectum
30	chr4:105887400-105887600	Active TSS	GM12878-XiMat	blood
31	chr4:105887400-105888000	Enhancers	Primary B cells from peripheral blood	blood
32	chr4:105887400-105888600	Enhancers	Primary hematopoietic stem cells short term culture	blood
33	chr4:105887400-105888600	Active TSS	Rectal Mucosa Donor 31	rectum
34	chr4:105887600-105887800	Flanking Active TSS	GM12878-XiMat	blood
35	chr4:105887600-105887800	Enhancers	NHEK	skin
36	chr4:105887600-105888000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
37	chr4:105887600-105888000	Active TSS	Stomach Mucosa	stomach
38	chr4:105887600-105888200	Enhancers	Duodenum Mucosa	Duodenum
39	chr4:105887600-105888400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr4:105887600-105888400	Enhancers	Adipose Nuclei	Adipose
41	chr4:105887600-105888400	Enhancers	Fetal Lung	lung
42	chr4:105887600-105888400	Enhancers	Placenta Amnion	Placenta Amnion
43	chr4:105887600-105888600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
44	chr4:105887600-105888600	Enhancers	Primary T helper cells fromperipheralblood	blood
45	chr4:105887600-105888600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr4:105887600-105888600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr4:105887600-105888600	Enhancers	Fetal Intestine Large	intestine
48	chr4:105887600-105888600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
49	chr4:105887600-105888800	Enhancers	Primary hematopoietic stem cells	blood
50	chr4:105887800-105888000	Active TSS	Primary T regulatory cells fromperipheralblood	blood

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