Variant report

Variant nsv830282
Chromosome Location chr5:45418260-45573515
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:167 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:45404200-45419200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:45419000-45419400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:45419200-45419400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr5:45426400-45426800 Enhancers Skeletal Muscle Male skeletal muscle
5 chr5:45426600-45427400 Enhancers Skeletal Muscle Female skeletal muscle
6 chr5:45436200-45436400 Enhancers Skeletal Muscle Male skeletal muscle
7 chr5:45436600-45437600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr5:45437000-45438000 Active TSS Skeletal Muscle Female skeletal muscle
9 chr5:45437600-45437800 Active TSS Skeletal Muscle Male skeletal muscle
10 chr5:45437800-45438000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
11 chr5:45438000-45438400 Enhancers Skeletal Muscle Female skeletal muscle
12 chr5:45438000-45440600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr5:45438400-45439600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr5:45440600-45440800 Enhancers Lung lung
15 chr5:45440600-45440800 Enhancers Skeletal Muscle Female skeletal muscle
16 chr5:45440600-45441000 Enhancers Skeletal Muscle Male skeletal muscle
17 chr5:45443600-45444200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr5:45453800-45454400 Enhancers iPS-18 Cell Line embryonic stem cell
19 chr5:45454000-45454400 Enhancers HUES48 Cell Line embryonic stem cell
20 chr5:45454000-45454400 Enhancers Skeletal Muscle Male skeletal muscle
21 chr5:45454000-45454800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr5:45454400-45454800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr5:45454800-45455200 Enhancers Skeletal Muscle Male skeletal muscle
24 chr5:45491000-45492000 Enhancers Liver Liver
25 chr5:45491000-45492000 Enhancers Rectal Mucosa Donor 31 rectum
26 chr5:45491000-45492400 Enhancers Fetal Intestine Large intestine
27 chr5:45492000-45500200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr5:45505800-45509600 Enhancers Fetal Brain Female brain
29 chr5:45506400-45506600 Enhancers Fetal Brain Male brain
30 chr5:45506600-45507600 Weak transcription Fetal Brain Male brain
31 chr5:45507200-45507600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr5:45507200-45507800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr5:45507200-45508400 Enhancers Brain Germinal Matrix brain
34 chr5:45507400-45507600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:45507400-45507600 Enhancers Skeletal Muscle Male skeletal muscle
36 chr5:45507600-45510000 Enhancers Fetal Brain Male brain
37 chr5:45509600-45510800 Weak transcription Fetal Brain Female brain
38 chr5:45510800-45511000 Enhancers Fetal Brain Female brain
39 chr5:45515400-45516200 Enhancers Fetal Heart heart
40 chr5:45518200-45518600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr5:45518600-45524000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr5:45520800-45521200 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr5:45520800-45521200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr5:45521000-45521400 Enhancers HUES64 Cell Line embryonic stem cell
45 chr5:45521400-45521800 Enhancers Skeletal Muscle Male skeletal muscle
46 chr5:45521400-45521800 Enhancers Skeletal Muscle Female skeletal muscle
47 chr5:45524000-45524200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:45524200-45526400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr5:45525800-45532800 Weak transcription Fetal Heart heart
50 chr5:45526400-45526800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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