No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs148744193 |
chr5:59480293-59480294 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs368623029 |
chr5:59480324-59480325 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs57996583 |
chr5:59480425-59480426 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs535013053 |
chr5:59480431-59480432 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs564862259 |
chr5:59480444-59480445 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs532107939 |
chr5:59480447-59480448 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs142250491 |
chr5:59480483-59480484 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs575145930 |
chr5:59480512-59480513 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs181550964 |
chr5:59480548-59480549 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs557562760 |
chr5:59480557-59480558 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs549897373 |
chr5:59480582-59480583 |
Enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs536580556 |
chr5:59480642-59480643 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs577385033 |
chr5:59480644-59480645 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs562386735 |
chr5:59480651-59480652 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs529850903 |
chr5:59480653-59480654 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs146798681 |
chr5:59480665-59480666 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs548320892 |
chr5:59480681-59480682 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs564973217 |
chr5:59480697-59480698 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs566677433 |
chr5:59480709-59480710 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs527444947 |
chr5:59480763-59480764 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs540617829 |
chr5:59480787-59480788 |
Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs186261318 |
chr5:59480800-59480801 |
Strong transcription Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs12515241 |
chr5:59480816-59480817 |
Strong transcription Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs191421108 |
chr5:59480843-59480844 |
Strong transcription Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs569696769 |
chr5:59480894-59480895 |
Strong transcription Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs549677721 |
chr5:59481010-59481011 |
Strong transcription Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs16877736 |
chr5:59481106-59481107 |
Strong transcription Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
28 |
rs139969276 |
chr5:59481128-59481129 |
Strong transcription Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs532312112 |
chr5:59481145-59481146 |
Strong transcription Weak transcription Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs552132490 |
chr5:59481248-59481249 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs182773624 |
chr5:59481299-59481300 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs370728234 |
chr5:59481457-59481458 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs186583057 |
chr5:59481458-59481459 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs377739811 |
chr5:59481477-59481478 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs568489055 |
chr5:59481478-59481479 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs546714148 |
chr5:59481488-59481489 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs143510155 |
chr5:59481503-59481504 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs557619619 |
chr5:59481509-59481510 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs539182831 |
chr5:59481531-59481532 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs577497319 |
chr5:59481611-59481612 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs540023693 |
chr5:59481616-59481617 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs190639187 |
chr5:59481628-59481629 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs146721975 |
chr5:59481630-59481631 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs140264265 |
chr5:59481631-59481632 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs560511416 |
chr5:59481657-59481658 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs574077577 |
chr5:59481714-59481715 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs543041961 |
chr5:59481749-59481750 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs565095739 |
chr5:59481763-59481764 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs11451682 |
chr5:59481764-59481765 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs563594311 |
chr5:59481777-59481778 |
Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|