Variant report

Variant	nsv830399
Chromosome Location	chr5:92290915-92462490
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1205)
CpG islands
(count:427)
Chromatin interactive
region (count:19)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1205 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:92415566-92415645	HepG2	liver:	n/a	n/a
2	ARID3A	chr5:92334242-92334547	HepG2	liver:	n/a	n/a
3	ARID3A	chr5:92389338-92389960	HepG2	liver:	n/a	n/a
4	ARID3A	chr5:92414075-92415220	HepG2	liver:	n/a	chr5:92415053-92415069
5	ARID3A	chr5:92305019-92306486	HepG2	liver:	n/a	n/a
6	ATF2	chr5:92413606-92414879	GM12878	blood:	n/a	n/a
7	ATF2	chr5:92413700-92414458	GM12878	blood:	n/a	n/a
8	ATF2	chr5:92407439-92407899	GM12878	blood:	n/a	n/a
9	ATF3	chr5:92414076-92414840	A549	lung:	n/a	n/a
10	ATF3	chr5:92414022-92414911	A549	lung:	n/a	n/a
11	ATF3	chr5:92414032-92414885	HCT-116	colon:	n/a	n/a
12	BATF	chr5:92414391-92414753	GM12878	blood:	n/a	n/a
13	BATF	chr5:92413856-92414859	GM12878	blood:	n/a	chr5:92414829-92414838
14	BATF	chr5:92407499-92407722	GM12878	blood:	n/a	n/a
15	BCL11A	chr5:92414154-92414729	GM12878	blood:	n/a	chr5:92414576-92414585
16	BCL3	chr5:92413805-92414097	GM12878	blood:	n/a	chr5:92414056-92414065
17	BCL3	chr5:92414111-92414686	GM12878	blood:	n/a	chr5:92414576-92414585
18	BCL3	chr5:92413750-92415089	A549	lung:	n/a	chr5:92414576-92414585 chr5:92414056-92414065
19	BCL3	chr5:92414083-92414913	A549	lung:	n/a	chr5:92414576-92414585
20	BCL3	chr5:92305386-92305994	A549	lung:	n/a	n/a
21	BCLAF1	chr5:92413737-92414382	GM12878	blood:	n/a	chr5:92414056-92414065
22	BHLHE40	chr5:92414397-92414563	GM12878	blood:	n/a	n/a
23	BHLHE40	chr5:92414175-92414962	HepG2	liver:	n/a	n/a
24	BRCA1	chr5:92436467-92436636	Hela-S3	cervix:	n/a	n/a
25	BRCA1	chr5:92414196-92414663	Hela-S3	cervix:	n/a	n/a
26	CBX3	chr5:92413961-92414992	HCT-116	colon:	n/a	n/a
27	CBX3	chr5:92414047-92414941	HCT-116	colon:	n/a	n/a
28	CBX3	chr5:92436063-92436613	HCT-116	colon:	n/a	n/a
29	CBX3	chr5:92435536-92436600	HCT-116	colon:	n/a	n/a
30	CCNT2	chr5:92438368-92438515	K562	blood:	n/a	n/a
31	CCNT2	chr5:92313304-92313397	K562	blood:	n/a	n/a
32	CEBPB	chr5:92393932-92394452	IMR90	lung:	n/a	n/a
33	CEBPB	chr5:92389748-92389947	Hela-S3	cervix:	n/a	chr5:92389824-92389835
34	CEBPB	chr5:92304969-92305374	HepG2	liver:	n/a	n/a
35	CEBPB	chr5:92404998-92405360	IMR90	lung:	n/a	n/a
36	CEBPB	chr5:92305595-92305992	HepG2	liver:	n/a	n/a
37	CEBPB	chr5:92389713-92389878	HepG2	liver:	n/a	chr5:92389824-92389835
38	CEBPB	chr5:92389650-92389953	A549	lung:	n/a	chr5:92389824-92389835
39	CEBPB	chr5:92304903-92306065	A549	lung:	n/a	n/a
40	CEBPB	chr5:92364345-92364694	IMR90	lung:	n/a	chr5:92364517-92364526 chr5:92364512-92364529 chr5:92364515-92364526 chr5:92364515-92364528 chr5:92364517-92364526 chr5:92364515-92364528 chr5:92364517-92364526
41	CEBPB	chr5:92344467-92344788	IMR90	lung:	n/a	chr5:92344638-92344649
42	CEBPB	chr5:92405105-92405333	H1-hESC	embryonic stem cell:	n/a	n/a
43	CEBPB	chr5:92414336-92414541	HepG2	liver:	n/a	n/a
44	CEBPB	chr5:92405012-92405347	HepG2	liver:	n/a	n/a
45	CEBPB	chr5:92344476-92344743	HepG2	liver:	n/a	chr5:92344638-92344649
46	CEBPB	chr5:92390501-92390815	A549	lung:	n/a	chr5:92390684-92390701 chr5:92390634-92390645 chr5:92390633-92390646
47	CEBPB	chr5:92459769-92459985	IMR90	lung:	n/a	chr5:92459890-92459901
48	CEBPB	chr5:92364333-92364663	A549	lung:	n/a	chr5:92364517-92364526 chr5:92364512-92364529 chr5:92364515-92364526 chr5:92364515-92364528 chr5:92364517-92364526 chr5:92364515-92364528 chr5:92364517-92364526
49	CEBPB	chr5:92389609-92389991	HepG2	liver:	n/a	chr5:92389824-92389835
50	CEBPB	chr5:92459763-92460056	HepG2	liver:	n/a	chr5:92459890-92459901

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:92359386-92359436	GM12878	blood:	n/a
2	chr5:92390297-92390347	ECC-1	luminal epithelium:	n/a
3	chr5:92390297-92390347	HEK293	kidney:	embryo
4	chr5:92414263-92414313	HL-60	blood:	n/a
5	chr5:92353980-92354030	MCF10A-Er-Src	breast:	n/a
6	chr5:92359386-92359436	A549	lung:	n/a
7	chr5:92456475-92456525	HepG2	liver:	n/a
8	chr5:92414398-92414448	IMR90	lung:	fetal
9	chr5:92359386-92359436	GM12891	blood:	n/a
10	chr5:92456475-92456525	SAEC	small airway:	n/a
11	chr5:92456475-92456525	AG04450	lung:	fetal
12	chr5:92390297-92390347	HRPEpiC	eye:	n/a
13	chr5:92456475-92456525	K562	blood:	n/a
14	chr5:92414263-92414313	AG09309	skin:	n/a
15	chr5:92443321-92443371	HCT-116	colon:	n/a
16	chr5:92414398-92414448	HEK293	kidney:	embryo
17	chr5:92414398-92414448	RPTEC	kidney:	n/a
18	chr5:92414398-92414448	HCPEpiC	choroid plexus:	n/a
19	chr5:92414398-92414448	AoSMC	blood vessel:	n/a
20	chr5:92353980-92354030	HCM	heart:	n/a
21	chr5:92456475-92456525	HCT-116	colon:	n/a
22	chr5:92414398-92414448	HCM	heart:	n/a
23	chr5:92414263-92414313	AG10803	skin:	n/a
24	chr5:92443321-92443371	HAEpiC	amniotic membrane:	n/a
25	chr5:92443321-92443371	SK-N-SH_RA	brain:	n/a
26	chr5:92390297-92390347	MCF-7	breast:	n/a
27	chr5:92443321-92443371	Caco-2	colon:	n/a
28	chr5:92414263-92414313	PFSK-1	brain:	n/a
29	chr5:92414398-92414448	HCF	heart:	n/a
30	chr5:92353980-92354030	GM06990	blood:	n/a
31	chr5:92456475-92456525	IMR90	lung:	fetal
32	chr5:92390297-92390347	AG09309	skin:	n/a
33	chr5:92456475-92456525	U87	brain:	n/a
34	chr5:92390297-92390347	AoSMC	blood vessel:	n/a
35	chr5:92443321-92443371	RPTEC	kidney:	n/a
36	chr5:92414263-92414313	SKMC	muscle:	n/a
37	chr5:92414263-92414313	K562	blood:	n/a
38	chr5:92414263-92414313	PrEC	prostate:	n/a
39	chr5:92414398-92414448	HUVEC	blood vessel:	n/a
40	chr5:92456475-92456525	HPAEpiC	pulmonary alveolar:	n/a
41	chr5:92359386-92359436	HRCEpiC	kidney:	n/a
42	chr5:92456475-92456525	ECC-1	luminal epithelium:	n/a
43	chr5:92443321-92443371	HRPEpiC	eye:	n/a
44	chr5:92390297-92390347	HPAEpiC	pulmonary alveolar:	n/a
45	chr5:92390297-92390347	HRE	kidney:	n/a
46	chr5:92414398-92414448	HAEpiC	amniotic membrane:	n/a
47	chr5:92414263-92414313	HNPCEpiC	eye:	n/a
48	chr5:92443321-92443371	HNPCEpiC	eye:	n/a
49	chr5:92353980-92354030	A549	lung:	n/a
50	chr5:92456475-92456525	HCF	heart:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:92251422..92252255-chr5:92398378..92398924,2	MCF-7	breast:
2	chr5:92405044..92407618-chr5:92412622..92415093,2	MCF-7	breast:
3	chr5:92341494..92343841-chr5:92349667..92352121,2	MCF-7	breast:
4	chr5:92407114..92407835-chr6:11032821..11033413,2	MCF-7	breast:
5	chr5:92459385..92461272-chr5:92463234..92464762,2	K562	blood:
6	chr5:92346285..92348626-chr5:92350625..92352149,2	K562	blood:
7	chr3:64008901..64009651-chr5:92358834..92359435,2	MCF-7	breast:
8	chr5:92318316..92320626-chr5:92328876..92330818,2	K562	blood:
9	chr5:92346285..92348626-chr5:92350625..92352149,2	K562	blood:
10	chr5:92341478..92344657-chr5:92345293..92348897,3	K562	blood:
11	chr5:92405044..92407618-chr5:92412622..92415093,2	MCF-7	breast:
12	chr5:92221557..92222255-chr5:92397971..92398957,3	MCF-7	breast:
13	chr5:92318316..92320626-chr5:92328876..92330818,2	K562	blood:
14	chr5:91605328..91605934-chr5:92396912..92397633,2	MCF-7	breast:
15	chr5:92341478..92344657-chr5:92345293..92348897,3	K562	blood:
16	chr5:92449412..92451915-chr5:92457992..92460687,2	K562	blood:
17	chr5:92341494..92343841-chr5:92349667..92352121,2	MCF-7	breast:
18	chr5:92449412..92451915-chr5:92457992..92460687,2	K562	blood:
19	chr5:92385196..92386714-chr5:92403830..92406331,2	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM172A-3	chr5:92404332-92404375	XLOC_004929
2	lnc-NR2F1-2	chr5:92426103-92426530	XLOC_004474
3	lnc-NR2F1-2	chr5:92424509-92424627	XLOC_004474
4	lnc-FAM172A-3	chr5:92387376-92387482	XLOC_004929
5	lnc-FAM172A-3	chr5:92355369-92355842	XLOC_004929

No data

Variant related genes	Relation type
ENSG00000251361	TF binding region
ENSG00000251361	CpG island
ENSG00000163636	chromatin interactions
ENSG00000251361	chromatin interactions
C1orf144	miRNA target sites
WDR60	miRNA target sites
ARHGAP12	miRNA target sites

Extended variants
information (count: 4894 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:4894 , 50 per page) page: 1 2 3 4 5 6 7 ... 98

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs35274262	chr5:92291000-92291001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs539233896	chr5:92291004-92291005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs144437707	chr5:92291070-92291071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs552936038	chr5:92291076-92291077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs566364515	chr5:92291078-92291079	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs190323034	chr5:92291093-92291094	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs139413827	chr5:92291124-92291125	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs145136077	chr5:92291145-92291146	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs147582063	chr5:92291155-92291156	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs556627333	chr5:92291188-92291189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs79183379	chr5:92291198-92291199	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs140525463	chr5:92291214-92291215	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs559257053	chr5:92291301-92291302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs181503256	chr5:92291348-92291349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs439778	chr5:92291377-92291378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs142153334	chr5:92291382-92291383	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs530273125	chr5:92291404-92291405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs151115916	chr5:92291405-92291406	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs534109426	chr5:92291460-92291461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs560649931	chr5:92291551-92291552	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs561296666	chr5:92291553-92291554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs547624799	chr5:92291567-92291568	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs73144813	chr5:92291583-92291584	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs550346637	chr5:92291589-92291590	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs563753890	chr5:92291615-92291616	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs375765802	chr5:92291619-92291620	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs376703605	chr5:92291622-92291623	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs186930604	chr5:92291647-92291648	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs75977128	chr5:92291649-92291650	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs566395330	chr5:92291650-92291651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs535275281	chr5:92291660-92291661	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs191375630	chr5:92291744-92291745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs568086557	chr5:92291768-92291769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs371609990	chr5:92291808-92291809	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs182598550	chr5:92291828-92291829	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs374653246	chr5:92291867-92291868	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs556665987	chr5:92291878-92291879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs576514648	chr5:92291958-92291959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs539271513	chr5:92291988-92291989	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs185456467	chr5:92292027-92292028	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs573065426	chr5:92292034-92292035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs566545606	chr5:92292040-92292041	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs189719859	chr5:92292087-92292088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs73144814	chr5:92292102-92292103	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs574806065	chr5:92292103-92292104	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs543825291	chr5:92292124-92292125	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs183479485	chr5:92292127-92292128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs563484348	chr5:92292181-92292182	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs532620560	chr5:92292206-92292207	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs62366788	chr5:92292209-92292210	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Merkel cell carcinoma	19020549	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Testicular cancer	18059402	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Mental retardation	19471318	CNVD
Renal cell carcinoma	18194544	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	16774939	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:768 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:92289800-92292200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr5:92292200-92293400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr5:92292800-92293000	Enhancers	Right Ventricle	heart
4	chr5:92292800-92293400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr5:92293400-92298600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr5:92297400-92297600	Enhancers	Brain Angular Gyrus	brain
7	chr5:92297600-92298600	Weak transcription	Brain Angular Gyrus	brain
8	chr5:92298000-92299200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr5:92298200-92299000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr5:92298200-92299000	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr5:92298200-92299000	Bivalent Enhancer	Fetal Heart	heart
12	chr5:92298200-92299400	Enhancers	Brain Germinal Matrix	brain
13	chr5:92298400-92299600	Enhancers	Fetal Lung	lung
14	chr5:92298600-92299200	Enhancers	Brain Angular Gyrus	brain
15	chr5:92298600-92299200	Enhancers	Brain Hippocampus Middle	brain
16	chr5:92298600-92299200	Enhancers	HepG2	liver
17	chr5:92298600-92299400	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr5:92299000-92299400	Enhancers	Brain Substantia Nigra	brain
19	chr5:92299000-92299800	Enhancers	Placenta Amnion	Placenta Amnion
20	chr5:92299200-92301000	Weak transcription	HepG2	liver
21	chr5:92299200-92304600	Weak transcription	Brain Hippocampus Middle	brain
22	chr5:92299200-92305000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr5:92299200-92305000	Weak transcription	Brain Angular Gyrus	brain
24	chr5:92299400-92304200	Weak transcription	Brain Substantia Nigra	brain
25	chr5:92299400-92304800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr5:92301000-92301400	Enhancers	HepG2	liver
27	chr5:92301400-92303000	Weak transcription	HepG2	liver
28	chr5:92302000-92304800	Weak transcription	Pancreas	Pancrea
29	chr5:92303000-92308000	Enhancers	HepG2	liver
30	chr5:92304200-92305600	Enhancers	Brain Substantia Nigra	brain
31	chr5:92304600-92304800	Enhancers	Brain Anterior Caudate	brain
32	chr5:92304600-92304800	Enhancers	Brain Hippocampus Middle	brain
33	chr5:92304600-92304800	Enhancers	A549	lung
34	chr5:92304600-92307600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr5:92304800-92305000	Flanking Active TSS	Brain Hippocampus Middle	brain
36	chr5:92304800-92305200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr5:92304800-92305200	Flanking Active TSS	Brain Anterior Caudate	brain
38	chr5:92304800-92305200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
39	chr5:92304800-92305200	Enhancers	Pancreas	Pancrea
40	chr5:92304800-92305200	Flanking Active TSS	A549	lung
41	chr5:92304800-92305400	Enhancers	Brain Cingulate Gyrus	brain
42	chr5:92304800-92305600	Enhancers	Brain Inferior Temporal Lobe	brain
43	chr5:92304800-92306000	Enhancers	Breast Myoepithelial Primary Cells	Breast
44	chr5:92304800-92306200	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr5:92305000-92305200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr5:92305000-92305200	Enhancers	Brain Hippocampus Middle	brain
47	chr5:92305000-92305400	Enhancers	Brain Angular Gyrus	brain
48	chr5:92305000-92306000	Enhancers	Gastric	stomach
49	chr5:92305000-92306400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr5:92305200-92305400	Flanking Active TSS	Brain Hippocampus Middle	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links