Variant report

Variant	nsv830741
Chromosome Location	chr6:100059575-100256005
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1012)
CpG islands
(count:1286)
Chromatin interactive
region (count:42)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:1012 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:100194131-100194511	K562	blood:	n/a	n/a
2	ARID3A	chr6:100238634-100238815	K562	blood:	n/a	n/a
3	ARID3A	chr6:100194235-100194469	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:100159326-100159526	K562	blood:	n/a	n/a
5	ATF1	chr6:100194150-100194505	K562	blood:	n/a	n/a
6	BACH1	chr6:100062501-100062547	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr6:100062168-100062287	H1-hESC	embryonic stem cell:	n/a	n/a
8	BHLHE40	chr6:100061356-100061856	GM12878	blood:	n/a	n/a
9	BHLHE40	chr6:100194216-100194464	GM12878	blood:	n/a	n/a
10	BRCA1	chr6:100066893-100067277	H1-hESC	embryonic stem cell:	n/a	n/a
11	BRCA1	chr6:100112865-100112866	H1-hESC	embryonic stem cell:	n/a	n/a
12	CCNT2	chr6:100062400-100062897	K562	blood:	n/a	n/a
13	CCNT2	chr6:100187813-100188135	K562	blood:	n/a	chr6:100187844-100187864
14	CCNT2	chr6:100205633-100205833	K562	blood:	n/a	n/a
15	CEBPB	chr6:100109750-100110076	K562	blood:	n/a	chr6:100109892-100109903
16	CEBPB	chr6:100194117-100194540	IMR90	lung:	n/a	n/a
17	CEBPB	chr6:100109762-100110091	MCF-7	breast:	n/a	chr6:100109892-100109903
18	CEBPB	chr6:100194215-100194507	HepG2	liver:	n/a	n/a
19	CEBPB	chr6:100141047-100141213	K562	blood:	n/a	n/a
20	CEBPB	chr6:100109819-100110012	IMR90	lung:	n/a	chr6:100109892-100109903
21	CEBPB	chr6:100159231-100159545	K562	blood:	n/a	n/a
22	CEBPB	chr6:100109762-100110079	A549	lung:	n/a	chr6:100109892-100109903
23	CEBPB	chr6:100109745-100110072	Hela-S3	cervix:	n/a	chr6:100109892-100109903
24	CEBPB	chr6:100194087-100194510	MCF-7	breast:	n/a	n/a
25	CEBPB	chr6:100109761-100109965	K562	blood:	n/a	chr6:100109892-100109903
26	CEBPB	chr6:100194124-100194505	K562	blood:	n/a	n/a
27	CEBPB	chr6:100109737-100110022	K562	blood:	n/a	chr6:100109892-100109903
28	CEBPB	chr6:100159197-100159508	K562	blood:	n/a	n/a
29	CEBPB	chr6:100063346-100063558	H1-hESC	embryonic stem cell:	n/a	chr6:100063399-100063410
30	CEBPB	chr6:100063249-100063489	A549	lung:	n/a	chr6:100063399-100063410
31	CEBPB	chr6:100063226-100063562	IMR90	lung:	n/a	chr6:100063399-100063410
32	CEBPB	chr6:100159298-100159441	K562	blood:	n/a	n/a
33	CEBPB	chr6:100194114-100194555	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr6:100194088-100194549	K562	blood:	n/a	n/a
35	CEBPB	chr6:100109739-100110079	HepG2	liver:	n/a	chr6:100109892-100109903
36	CEBPB	chr6:100063225-100063563	HepG2	liver:	n/a	chr6:100063399-100063410
37	CEBPB	chr6:100062602-100062802	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr6:100063243-100063587	K562	blood:	n/a	chr6:100063399-100063410
39	CHD1	chr6:100061029-100061049	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD2	chr6:100062663-100062668	H1-hESC	embryonic stem cell:	n/a	n/a
41	CHD2	chr6:100250266-100250561	H1-hESC	embryonic stem cell:	n/a	n/a
42	CHD2	chr6:100066358-100067501	H1-hESC	embryonic stem cell:	n/a	n/a
43	CREB1	chr6:100061500-100061759	A549	lung:	n/a	n/a
44	CTBP2	chr6:100066452-100067125	H1-hESC	embryonic stem cell:	n/a	n/a
45	CTBP2	chr6:100060349-100062892	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr6:100224606-100224624	GM13976	blood:	n/a	n/a
47	CTCF	chr6:100061347-100061515	Lung_OC	lung:	n/a	n/a
48	CTCF	chr6:100194300-100194450	HAc	cerebellar:	n/a	chr6:100194349-100194357 chr6:100194339-100194360 chr6:100194345-100194361 chr6:100194344-100194362
49	CTCF	chr6:100194272-100194474	GM13976	blood:	n/a	chr6:100194349-100194357 chr6:100194339-100194360 chr6:100194345-100194361 chr6:100194344-100194362
50	CTCF	chr6:100061224-100061583	GM12891	blood:	n/a	n/a

(count:1286 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:100061307-100061357	CMK	blood:	n/a
2	chr6:100067930-100067980	HCT-116	colon:	n/a
3	chr6:100067930-100067980	AG09319	gingival:	n/a
4	chr6:100062855-100062905	HCPEpiC	choroid plexus:	n/a
5	chr6:100061307-100061357	SK-N-SH_RA	brain:	n/a
6	chr6:100061307-100061357	CMK	blood:	n/a
7	chr6:100067930-100067980	HCT-116	colon:	n/a
8	chr6:100067930-100067980	AG09319	gingival:	n/a
9	chr6:100062855-100062905	HCPEpiC	choroid plexus:	n/a
10	chr6:100061307-100061357	SK-N-SH_RA	brain:	n/a
11	chr6:100062572-100062622	SK-N-MC	brain:	n/a
12	chr6:100060980-100061030	U87	brain:	n/a
13	chr6:100061972-100062022	BE2_C	brain:	n/a
14	chr6:100061307-100061357	AG04449	skin:	fetal
15	chr6:100062692-100062742	RPTEC	kidney:	n/a
16	chr6:100060945-100060995	HCT-116	colon:	n/a
17	chr6:100066698-100066748	HMEC	breast:	n/a
18	chr6:100067169-100067219	AG10803	skin:	n/a
19	chr6:100062572-100062622	PFSK-1	brain:	n/a
20	chr6:100060980-100061030	HRCEpiC	kidney:	n/a
21	chr6:100062572-100062622	IMR90	lung:	fetal
22	chr6:100060917-100060967	BJ	skin:	n/a
23	chr6:100062572-100062622	HepG2	liver:	n/a
24	chr6:100067930-100067980	HCF	heart:	n/a
25	chr6:100060917-100060967	GM06990	blood:	n/a
26	chr6:100064885-100064935	Caco-2	colon:	n/a
27	chr6:100070033-100070083	PrEC	prostate:	n/a
28	chr6:100061111-100061161	HNPCEpiC	eye:	n/a
29	chr6:100070033-100070083	HCF	heart:	n/a
30	chr6:100066673-100066723	HRPEpiC	eye:	n/a
31	chr6:100062572-100062622	GM12891	blood:	n/a
32	chr6:100061972-100062022	HCM	heart:	n/a
33	chr6:100061972-100062022	BJ	skin:	n/a
34	chr6:100062762-100062812	Hela-S3	cervix:	n/a
35	chr6:100064885-100064935	GM19239	blood:	n/a
36	chr6:100067169-100067219	HCT-116	colon:	n/a
37	chr6:100061972-100062022	ECC-1	luminal epithelium:	n/a
38	chr6:100060980-100061030	HCM	heart:	n/a
39	chr6:100062855-100062905	SAEC	small airway:	n/a
40	chr6:100060453-100060503	PrEC	prostate:	n/a
41	chr6:100060945-100060995	Caco-2	colon:	n/a
42	chr6:100062259-100062309	HPAEpiC	pulmonary alveolar:	n/a
43	chr6:100060917-100060967	RPTEC	kidney:	n/a
44	chr6:100066673-100066723	HPAEpiC	pulmonary alveolar:	n/a
45	chr6:100059961-100060011	HCT-116	colon:	n/a
46	chr6:100061504-100061554	A549	lung:	n/a
47	chr6:100062855-100062905	GM12891	blood:	n/a
48	chr6:100066673-100066723	SK-N-MC	brain:	n/a
49	chr6:100066698-100066748	SK-N-SH_RA	brain:	n/a
50	chr6:100066698-100066748	AoSMC	blood vessel:	n/a

(count:42 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:100129099..100131664-chr6:100134092..100136353,2	K562	blood:
2	chr6:100129099..100131664-chr6:100134092..100136353,2	K562	blood:
3	chr6:99968831..99969601-chr6:100193945..100194805,2	MCF-7	breast:
4	chr6:99872719..99875193-chr6:100110487..100112410,3	K562	blood:
5	chr6:100181497..100183430-chr6:100186976..100188691,2	K562	blood:
6	chr6:100181497..100183430-chr6:100186976..100188691,2	K562	blood:
7	chr6:100125160..100127928-chr6:100129086..100131061,2	K562	blood:
8	chr6:100011938..100014816-chr6:100060425..100063371,2	K562	blood:
9	chr6:99960958..99963136-chr6:100118027..100119781,2	K562	blood:
10	chr6:100036266..100037491-chr6:100193890..100194876,6	MCF-7	breast:
11	chr6:100108373..100110039-chr6:100113982..100116110,2	K562	blood:
12	chr6:100070943..100073137-chr6:100076178..100078912,2	K562	blood:
13	chr6:100233447..100236128-chr6:100240809..100243116,2	K562	blood:
14	chr6:100244978..100247063-chr6:100249787..100252518,2	K562	blood:
15	chr6:99915110..99915926-chr6:100183980..100184607,3	MCF-7	breast:
16	chr6:99960823..99962633-chr6:100078349..100080302,2	K562	blood:
17	chr6:100108373..100110039-chr6:100113982..100116110,2	K562	blood:
18	chr6:99962785..99964977-chr6:100232517..100234921,2	K562	blood:
19	chr6:100070943..100073137-chr6:100076178..100078912,2	K562	blood:
20	chr6:100058372..100060398-chr6:100062317..100064918,2	K562	blood:
21	chr6:100242868..100244592-chr6:100245925..100248050,2	K562	blood:
22	chr6:100208776..100211504-chr6:100213680..100216754,3	K562	blood:
23	chr6:100208776..100211504-chr6:100213680..100216754,3	K562	blood:
24	chr6:99969415..99972302-chr6:100096575..100099530,2	K562	blood:
25	chr6:100050919..100054187-chr6:100056196..100060262,4	K562	blood:
26	chr6:100244978..100247063-chr6:100249787..100252518,2	K562	blood:
27	chr6:99969346..99970849-chr6:100107969..100110666,2	K562	blood:
28	chr6:100051321..100053116-chr6:100133794..100136469,2	K562	blood:
29	chr6:100242868..100244592-chr6:100245925..100248050,2	K562	blood:
30	chr6:100023693..100025879-chr6:100058058..100059618,2	K562	blood:
31	chr6:100036208..100037176-chr6:100194325..100194870,2	MCF-7	breast:
32	chr6:100125160..100127928-chr6:100129086..100131061,2	K562	blood:
33	chr6:100066552..100068604-chr6:100070899..100073128,2	K562	blood:
34	chr6:99915543..99916148-chr6:100238364..100238986,2	MCF-7	breast:
35	chr6:99777018..99778260-chr6:100193819..100194864,5	K562	blood:
36	chr6:100015318..100018236-chr6:100251472..100253903,2	MCF-7	breast:
37	chr6:100058372..100060398-chr6:100062317..100064918,2	K562	blood:
38	chr6:100014953..100017914-chr6:100059147..100062070,2	K562	blood:
39	chr6:99968949..99970450-chr6:100059260..100061320,2	K562	blood:
40	chr6:100233447..100236128-chr6:100240809..100243116,2	K562	blood:
41	chr6:99915329..99916063-chr6:100193862..100194796,2	K562	blood:
42	chr6:100066552..100068604-chr6:100070899..100073128,2	K562	blood:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CCNC-3	chr6:100158705-100158944	uc_201_-
2	lnc-PRDM13-8	chr6:100158705-100158944	uc_201_+
3	lnc-PRDM13-6	chr6:100080661-100080704	NONHSAT114137
4	lnc-PRDM13-6	chr6:100075290-100075744	NONHSAT114137
5	lnc-PRDM13-6	chr6:100086229-100086437	NONHSAT114137
6	lnc-PRDM13-6	chr6:100085960-100086133	NONHSAT114137

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	PRDM13	hsa-miR-124-3p	chr6:100063026-100063045
2	PRDM13	hsa-miR-124-3p	chr6:100063038-100063044

Variant related genes	Relation type
ENSG00000199303	TF binding region
ENSG00000199303	CpG island
ENSG00000112237	chromatin interactions
ENSG00000123552	chromatin interactions
ENSG00000228506	chromatin interactions
ENSG00000272017	chromatin interactions
ENSG00000132424	chromatin interactions

Extended variants
information (count: 1911 )
Associated
traits (count: 111 )

Variant overlapped rSNPs/rCNVs (count:1911 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs368145492	chr6:100059592-100059593	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs560683339	chr6:100059626-100059627	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs149999390	chr6:100059644-100059645	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs540466866	chr6:100059725-100059726	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs78247956	chr6:100059747-100059748	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs541477072	chr6:100059783-100059784	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs578081040	chr6:100059790-100059791	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs551229278	chr6:100059831-100059832	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs564614939	chr6:100059835-100059836	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs569177095	chr6:100059840-100059841	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs530155084	chr6:100059856-100059857	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs548582926	chr6:100059870-100059871	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs545517517	chr6:100059968-100059969	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs534275727	chr6:100059977-100059978	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs561806293	chr6:100060075-100060076	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs372810417	chr6:100060089-100060090	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs193073358	chr6:100060173-100060174	Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs538576863	chr6:100060218-100060219	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs75285781	chr6:100060258-100060259	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs575433812	chr6:100060266-100060267	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs563678282	chr6:100060459-100060460	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs149082712	chr6:100060470-100060471	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs554139242	chr6:100060513-100060514	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs572613886	chr6:100060575-100060576	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs199500136	chr6:100060612-100060613	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs371033020	chr6:100060630-100060631	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs530890286	chr6:100060643-100060644	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs577334004	chr6:100060713-100060714	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs330843	chr6:100060761-100060762	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs563226959	chr6:100060778-100060779	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs6935767	chr6:100060792-100060793	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs528919537	chr6:100060815-100060816	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs376942661	chr6:100060875-100060876	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs202002402	chr6:100060911-100060912	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs371644111	chr6:100060932-100060933	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs374602504	chr6:100060953-100060954	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs200937927	chr6:100060999-100061000	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs369899275	chr6:100061003-100061004	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs201507328	chr6:100061006-100061007	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs367575849	chr6:100061012-100061013	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs527788683	chr6:100061016-100061017	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs370254545	chr6:100061036-100061037	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs373935217	chr6:100061103-100061104	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs183537963	chr6:100061120-100061121	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs571366042	chr6:100061145-100061146	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs371879403	chr6:100061150-100061151	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs375253385	chr6:100061153-100061154	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs35145162	chr6:100061168-100061169	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs368638439	chr6:100061198-100061199	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs200243118	chr6:100061221-100061222	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:111)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
small cell lung cancer	20016488	CNVD
Burkitt''s lymphoma	18698080	CNVD
Ovarian cancer	21720365	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17170743	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21785460	CNVD
Developmental delay	21147756	CNVD
Schizophrenia	23813976	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Myelofibrosis	22110671	CNVD
Obesity	21045960	CNVD
Liver carcinoma	19366792	CNVD
Neurodevelopmental disorder	22521361	CNVD
Breast cancer	22522925	CNVD
T-cell lymphomas	22341440	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Gastric cancer	17229543	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:638 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:100057200-100059800	Enhancers	Dnd41	blood
2	chr6:100057200-100060400	Weak transcription	Pancreas	Pancrea
3	chr6:100057800-100059600	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
4	chr6:100057800-100059600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr6:100057800-100059600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:100058000-100060000	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
7	chr6:100058000-100060400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
8	chr6:100058400-100059600	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
9	chr6:100058600-100059600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
10	chr6:100058600-100059600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
11	chr6:100058800-100059600	Flanking Active TSS	K562	blood
12	chr6:100058800-100059600	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
13	chr6:100058800-100060200	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
14	chr6:100059000-100059600	Enhancers	Primary hematopoietic stem cells short term culture	blood
15	chr6:100059200-100059600	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
16	chr6:100059200-100059600	Bivalent Enhancer	Primary hematopoietic stem cells	blood
17	chr6:100059200-100059600	Flanking Active TSS	GM12878-XiMat	blood
18	chr6:100059400-100059600	Bivalent Enhancer	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr6:100059600-100059800	Enhancers	GM12878-XiMat	blood
20	chr6:100059600-100059800	Enhancers	K562	blood
21	chr6:100059800-100060200	Weak transcription	GM12878-XiMat	blood
22	chr6:100060200-100060400	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
23	chr6:100060200-100061600	ZNF genes & repeats	GM12878-XiMat	blood
24	chr6:100060400-100060600	Flanking Bivalent TSS/Enh	ES-I3 Cell Line	embryonic stem cell
25	chr6:100060400-100060600	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
26	chr6:100060400-100060600	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
27	chr6:100060400-100060600	Bivalent Enhancer	H9 Cell Line	embryonic stem cell
28	chr6:100060400-100060600	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
29	chr6:100060400-100060600	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
30	chr6:100060400-100060600	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
31	chr6:100060400-100060600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
32	chr6:100060400-100060600	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
33	chr6:100060400-100060600	Bivalent Enhancer	Fetal Brain Female	brain
34	chr6:100060400-100060800	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
35	chr6:100060400-100061000	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr6:100060400-100061000	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
37	chr6:100060400-100061000	Enhancers	Pancreas	Pancrea
38	chr6:100060400-100061200	Bivalent Enhancer	Spleen	Spleen
39	chr6:100060400-100061600	Enhancers	Gastric	stomach
40	chr6:100060600-100060800	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr6:100060600-100060800	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
42	chr6:100060600-100060800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
43	chr6:100060600-100060800	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
44	chr6:100060600-100060800	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
45	chr6:100060600-100060800	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr6:100060600-100060800	Bivalent Enhancer	Duodenum Mucosa	Duodenum
47	chr6:100060600-100060800	Bivalent Enhancer	Right Ventricle	heart
48	chr6:100060600-100061000	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr6:100060600-100061000	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
50	chr6:100060600-100061000	Bivalent Enhancer	Primary B cells from peripheral blood	blood

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