Variant report

Variant	nsv830825
Chromosome Location	chr6:142585242-142752575
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3042)
CpG islands
(count:1043)
Chromatin interactive
region (count:174)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3042 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:142644489-142644898	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:142670658-142671223	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:142625481-142626149	HepG2	liver:	n/a	chr6:142625831-142625847 chr6:142625832-142625848
4	ARID3A	chr6:142695150-142698942	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:142628986-142629665	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:142613290-142613649	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:142694224-142694799	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:142600361-142601116	HepG2	liver:	n/a	n/a
9	ARID3A	chr6:142586129-142587104	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:142721719-142722063	K562	blood:	n/a	n/a
11	ARID3A	chr6:142622007-142622355	HepG2	liver:	n/a	n/a
12	ARID3A	chr6:142709364-142709680	HepG2	liver:	n/a	n/a
13	ARID3A	chr6:142622792-142623208	HepG2	liver:	n/a	n/a
14	ARID3A	chr6:142727275-142727495	HepG2	liver:	n/a	n/a
15	ARID3A	chr6:142605559-142605856	HepG2	liver:	n/a	n/a
16	ARID3A	chr6:142725921-142726394	HepG2	liver:	n/a	n/a
17	ARID3A	chr6:142651998-142652911	HepG2	liver:	n/a	n/a
18	ARID3A	chr6:142618166-142620006	HepG2	liver:	n/a	n/a
19	ARID3A	chr6:142706532-142706807	HepG2	liver:	n/a	n/a
20	ARID3A	chr6:142601475-142601864	HepG2	liver:	n/a	n/a
21	ARID3A	chr6:142606196-142607379	HepG2	liver:	n/a	n/a
22	ATF1	chr6:142679190-142679537	K562	blood:	n/a	n/a
23	ATF1	chr6:142721679-142722007	K562	blood:	n/a	n/a
24	ATF2	chr6:142716771-142717301	GM12878	blood:	n/a	n/a
25	ATF2	chr6:142716812-142717283	GM12878	blood:	n/a	n/a
26	ATF3	chr6:142721678-142722066	K562	blood:	n/a	n/a
27	ATF3	chr6:142693428-142693977	HCT-116	colon:	n/a	n/a
28	ATF3	chr6:142696278-142696883	A549	lung:	n/a	n/a
29	ATF3	chr6:142696160-142696909	A549	lung:	n/a	n/a
30	ATF3	chr6:142693351-142694032	HCT-116	colon:	n/a	n/a
31	BACH1	chr6:142623058-142623526	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr6:142734735-142734773	H1-hESC	embryonic stem cell:	n/a	n/a
33	BATF	chr6:142716878-142717161	GM12878	blood:	n/a	n/a
34	BCL3	chr6:142697130-142697773	A549	lung:	n/a	n/a
35	BCL3	chr6:142734570-142735135	A549	lung:	n/a	chr6:142734779-142734788
36	BCL3	chr6:142695902-142697037	A549	lung:	n/a	chr6:142696737-142696746
37	BCL3	chr6:142696199-142696885	A549	lung:	n/a	chr6:142696737-142696746
38	BCL3	chr6:142734406-142735058	A549	lung:	n/a	chr6:142734779-142734788
39	BCL3	chr6:142709205-142709630	A549	lung:	n/a	n/a
40	BCL3	chr6:142619049-142619505	A549	lung:	n/a	n/a
41	BCL3	chr6:142699174-142699754	A549	lung:	n/a	n/a
42	BCL3	chr6:142706094-142706907	A549	lung:	n/a	n/a
43	BCL3	chr6:142623448-142623997	A549	lung:	n/a	n/a
44	BHLHE40	chr6:142721654-142722026	K562	blood:	n/a	n/a
45	BHLHE40	chr6:142623027-142623096	GM12878	blood:	n/a	n/a
46	BHLHE40	chr6:142634706-142634724	K562	blood:	n/a	n/a
47	BHLHE40	chr6:142716849-142717174	GM12878	blood:	n/a	n/a
48	BHLHE40	chr6:142622886-142623212	HepG2	liver:	n/a	n/a
49	BHLHE40	chr6:142606502-142606875	HepG2	liver:	n/a	n/a
50	BHLHE40	chr6:142606465-142606854	HepG2	liver:	n/a	n/a

(count:1043 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:142644368-142644418	PFSK-1	brain:	n/a
2	chr6:142721804-142721854	HPAEpiC	pulmonary alveolar:	n/a
3	chr6:142738443-142738493	A549	lung:	n/a
4	chr6:142738443-142738493	AG09309	skin:	n/a
5	chr6:142738443-142738493	CMK	blood:	n/a
6	chr6:142721804-142721854	HNPCEpiC	eye:	n/a
7	chr6:142644368-142644418	PFSK-1	brain:	n/a
8	chr6:142721804-142721854	HPAEpiC	pulmonary alveolar:	n/a
9	chr6:142738443-142738493	A549	lung:	n/a
10	chr6:142738443-142738493	AG09309	skin:	n/a
11	chr6:142738443-142738493	CMK	blood:	n/a
12	chr6:142721804-142721854	HNPCEpiC	eye:	n/a
13	chr6:142622515-142622565	GM12892	blood:	n/a
14	chr6:142644368-142644418	NT2-D1	testis:	n/a
15	chr6:142698737-142698787	HCF	heart:	n/a
16	chr6:142623433-142623483	Hepatocyte	liver:	n/a
17	chr6:142627231-142627281	IMR90	lung:	fetal
18	chr6:142622515-142622565	HCM	heart:	n/a
19	chr6:142622903-142622953	IMR90	lung:	fetal
20	chr6:142622897-142622947	NHBE	bronchial:	n/a
21	chr6:142597201-142597251	RPTEC	kidney:	n/a
22	chr6:142623767-142623817	BE2_C	brain:	n/a
23	chr6:142622897-142622947	LNCaP	prostate:	n/a
24	chr6:142698737-142698787	HEK293	kidney:	embryo
25	chr6:142677346-142677396	HL-60	blood:	n/a
26	chr6:142698737-142698787	PANC-1	pancreas:	n/a
27	chr6:142622808-142622858	K562	blood:	n/a
28	chr6:142622515-142622565	AoSMC	blood vessel:	n/a
29	chr6:142623767-142623817	AoSMC	blood vessel:	n/a
30	chr6:142623767-142623817	A549	lung:	n/a
31	chr6:142738443-142738493	ProgFib	skin:	n/a
32	chr6:142622808-142622858	NHBE	bronchial:	n/a
33	chr6:142622918-142622968	GM12878	blood:	n/a
34	chr6:142597201-142597251	HNPCEpiC	eye:	n/a
35	chr6:142622918-142622968	T-47D	breast:	n/a
36	chr6:142682670-142682720	ovcar-3	ovarian:	n/a
37	chr6:142623767-142623817	HUVEC	blood vessel:	n/a
38	chr6:142622920-142622970	T-47D	breast:	n/a
39	chr6:142622920-142622970	HMEC	breast:	n/a
40	chr6:142623433-142623483	GM12891	blood:	n/a
41	chr6:142682670-142682720	ECC-1	luminal epithelium:	n/a
42	chr6:142721804-142721854	HepG2	liver:	n/a
43	chr6:142623433-142623483	SAEC	small airway:	n/a
44	chr6:142597201-142597251	MCF-7	breast:	n/a
45	chr6:142627231-142627281	BJ	skin:	n/a
46	chr6:142721804-142721854	MCF10A-Er-Src	breast:	n/a
47	chr6:142622918-142622968	IMR90	lung:	fetal
48	chr6:142698737-142698787	GM19239	blood:	n/a
49	chr6:142622918-142622968	BE2_C	brain:	n/a
50	chr6:142623433-142623483	GM12892	blood:	n/a

(count:174 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr6:142616863..142618821-chr6:142620050..142622053,2	K562	blood:
2	chr6:142656122..142658707-chr6:142664475..142667430,3	MCF-7	breast:
3	chr6:142628297..142630973-chr6:142676608..142679458,2	MCF-7	breast:
4	chr6:142658136..142659637-chr6:142663898..142665923,2	MCF-7	breast:
5	chr6:142616393..142621187-chr6:142621251..142624872,10	MCF-7	breast:
6	chr6:142734245..142735957-chr6:142740878..142742479,2	MCF-7	breast:
7	chr6:142701833..142703764-chr6:142704857..142706958,3	MCF-7	breast:
8	chr6:142597957..142602701-chr6:142605128..142608228,4	MCF-7	breast:
9	chr6:142605268..142607994-chr6:142625765..142627558,2	K562	blood:
10	chr6:142600227..142602247-chr6:142611415..142613167,2	MCF-7	breast:
11	chr6:142683303..142685618-chr6:142695779..142698326,2	MCF-7	breast:
12	chr6:142638506..142640750-chr6:142643071..142645808,2	MCF-7	breast:
13	chr6:142600227..142602247-chr6:142611415..142613167,2	MCF-7	breast:
14	chr6:142626704..142628828-chr6:142640591..142642152,2	MCF-7	breast:
15	chr6:142621728..142625423-chr6:142644550..142646959,5	MCF-7	breast:
16	chr6:142683303..142685618-chr6:142695779..142698326,2	MCF-7	breast:
17	chr6:142607033..142608855-chr6:142608965..142611550,2	K562	blood:
18	chr6:142621734..142624141-chr6:142648345..142652169,3	MCF-7	breast:
19	chr6:142662353..142664564-chr6:142664981..142667307,2	MCF-7	breast:
20	chr6:142716545..142718055-chr6:142718448..142720130,2	MCF-7	breast:
21	chr6:142734245..142735957-chr6:142740878..142742479,2	MCF-7	breast:
22	chr6:142622324..142625256-chr6:142705073..142708395,4	MCF-7	breast:
23	chr6:142587570..142589234-chr6:142593481..142595662,2	MCF-7	breast:
24	chr6:142686552..142689660-chr6:142691331..142695100,3	MCF-7	breast:
25	chr6:142733339..142736237-chr6:142747446..142749492,2	MCF-7	breast:
26	chr6:142467634..142468596-chr6:142709170..142710030,4	MCF-7	breast:
27	chr6:142666001..142668001-chr6:142687415..142689537,2	MCF-7	breast:
28	chr6:142616281..142618889-chr6:142707145..142709982,2	MCF-7	breast:
29	chr6:142604317..142606541-chr6:142618207..142619973,2	MCF-7	breast:
30	chr6:142605328..142611167-chr6:142620874..142624669,5	MCF-7	breast:
31	chr6:142644270..142645921-chr6:142696254..142697871,2	MCF-7	breast:
32	chr6:142673899..142675482-chr6:142676247..142678997,2	K562	blood:
33	chr6:142644240..142648928-chr6:142651290..142656139,5	MCF-7	breast:
34	chr6:142628313..142630816-chr6:142633666..142637433,4	MCF-7	breast:
35	chr6:142692998..142695094-chr6:142697780..142699490,2	MCF-7	breast:
36	chr6:142709536..142712491-chr6:142719118..142721434,2	K562	blood:
37	chr6:142667887..142670246-chr6:142675631..142677996,2	MCF-7	breast:
38	chr6:142721113..142722883-chr6:142736416..142738875,2	K562	blood:
39	chr6:142587554..142589196-chr6:142590216..142591755,2	MCF-7	breast:
40	chr6:142666001..142668001-chr6:142687415..142689537,2	MCF-7	breast:
41	chr6:142630584..142632218-chr6:142633613..142635386,2	K562	blood:
42	chr6:142619429..142621317-chr6:142736367..142738692,2	MCF-7	breast:
43	chr6:142587570..142589234-chr6:142593481..142595662,2	MCF-7	breast:
44	chr6:142624264..142626987-chr6:142649609..142652476,2	MCF-7	breast:
45	chr6:142628297..142630973-chr6:142676608..142679458,2	MCF-7	breast:
46	chr6:142649012..142650608-chr6:142659636..142662269,2	K562	blood:
47	chr6:142617568..142620556-chr6:142699575..142701431,2	MCF-7	breast:
48	chr6:142751726..142754592-chr6:142755945..142758339,2	K562	blood:
49	chr6:142477371..142478101-chr6:142709070..142709995,3	K562	blood:
50	chr6:142616281..142618889-chr6:142707145..142709982,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NMBR-5	chr6:142684212-142686824	NONHSAT115311
2	lnc-NMBR-4	chr6:142614677-142614796	NONHSAT115309
3	lnc-VTA1-2	chr6:142635265-142635798	NONHSAT115310
4	lnc-NMBR-4	chr6:142622234-142622462	NONHSAT115309

No data

Variant related genes	Relation type
GPR126	TF binding region
ENSG00000237494	TF binding region
ENSG00000266843	TF binding region
GPR126	CpG island
ENSG00000237494	CpG island
ENSG00000266843	CpG island
ENSG00000112414	chromatin interactions
ENSG00000212694	chromatin interactions
ENSG00000172262	chromatin interactions
ENSG00000010818	chromatin interactions
ENSG00000139718	chromatin interactions
ENSG00000009844	chromatin interactions
ENSG00000139725	chromatin interactions
ENSG00000197323	chromatin interactions

Extended variants
information (count: 5733 )
Associated
traits (count: 85 )

Variant overlapped rSNPs/rCNVs (count:5733 , 50 per page) page: 1 2 3 4 5 6 7 ... 115

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs540134424	chr6:142585279-142585280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs557283333	chr6:142585384-142585385	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs541379854	chr6:142585391-142585392	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs572500658	chr6:142585392-142585393	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs372197982	chr6:142585440-142585441	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs533581917	chr6:142585443-142585444	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs555025829	chr6:142585469-142585470	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs9376682	chr6:142585486-142585487	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs573706631	chr6:142585632-142585633	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs561856416	chr6:142585633-142585634	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs544044884	chr6:142585646-142585647	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs58919399	chr6:142585721-142585722	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs60887627	chr6:142585758-142585759	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
14	rs544165244	chr6:142585800-142585801	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs545287117	chr6:142585849-142585850	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs540568599	chr6:142585879-142585880	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs573745857	chr6:142585914-142585915	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs528479184	chr6:142585946-142585947	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs114908563	chr6:142585951-142585952	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs188494883	chr6:142585988-142585989	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs35773024	chr6:142586002-142586003	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs529403095	chr6:142586078-142586079	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs550854855	chr6:142586114-142586115	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs569436960	chr6:142586142-142586143	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs140316934	chr6:142586160-142586161	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs547154511	chr6:142586182-142586183	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs149953503	chr6:142586188-142586189	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs369916986	chr6:142586235-142586236	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs566856430	chr6:142586239-142586240	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs17185340	chr6:142586246-142586247	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs76418510	chr6:142586248-142586249	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs573616247	chr6:142586255-142586256	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs537952197	chr6:142586263-142586264	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs377541677	chr6:142586274-142586275	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs556035241	chr6:142586304-142586305	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs181268658	chr6:142586306-142586307	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs2782534	chr6:142586375-142586376	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs185052013	chr6:142586436-142586437	Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs75141915	chr6:142586437-142586438	Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs1931988	chr6:142586438-142586439	Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs540596685	chr6:142586530-142586531	Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs1931989	chr6:142586578-142586579	Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs9389980	chr6:142586629-142586630	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs76784315	chr6:142586717-142586718	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs189081737	chr6:142586757-142586758	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs533551079	chr6:142586759-142586760	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs551584829	chr6:142586791-142586792	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs566793073	chr6:142586851-142586852	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs527990118	chr6:142586880-142586881	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs180985366	chr6:142586927-142586928	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:85)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Gastric cancer	17908304	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Follicular lymphoma	18703704	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Breast cancer	21364760	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute monocytic leukemia	16498392	CNVD
Endocrine pancreatic tumor	17914106	CNVD
Soft tissue tumor	16732325	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
craniofacial dysmorphism	21918468	CNVD
Burkitt''s lymphoma	19759907	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:2405 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:142581200-142586600	Weak transcription	Liver	Liver
2	chr6:142583200-142590200	Weak transcription	Aorta	Aorta
3	chr6:142583400-142585400	Weak transcription	HepG2	liver
4	chr6:142585400-142586400	Enhancers	HepG2	liver
5	chr6:142586400-142587600	Flanking Active TSS	HepG2	liver
6	chr6:142586600-142587000	Enhancers	Liver	Liver
7	chr6:142586600-142587600	Enhancers	Fetal Intestine Large	intestine
8	chr6:142586800-142587600	Enhancers	Fetal Intestine Small	intestine
9	chr6:142587000-142587200	Enhancers	Duodenum Mucosa	Duodenum
10	chr6:142587200-142587600	Enhancers	HUVEC	blood vessel
11	chr6:142587600-142588200	Enhancers	HepG2	liver
12	chr6:142590200-142590600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr6:142590200-142590600	ZNF genes & repeats	Aorta	Aorta
14	chr6:142590600-142597000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr6:142595000-142597200	Enhancers	Fetal Intestine Large	intestine
16	chr6:142595000-142597600	Enhancers	Fetal Intestine Small	intestine
17	chr6:142595600-142598400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr6:142595800-142596000	Enhancers	Duodenum Mucosa	Duodenum
19	chr6:142596000-142596800	Enhancers	Fetal Lung	lung
20	chr6:142596000-142597200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr6:142596000-142597400	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr6:142596000-142600800	Weak transcription	Duodenum Mucosa	Duodenum
23	chr6:142596200-142596400	Enhancers	A549	lung
24	chr6:142596200-142596800	Enhancers	Placenta Amnion	Placenta Amnion
25	chr6:142596400-142597000	Flanking Active TSS	A549	lung
26	chr6:142596400-142597000	Enhancers	NHEK	skin
27	chr6:142596400-142597200	Enhancers	HepG2	liver
28	chr6:142596400-142597400	Enhancers	Placenta	Placenta
29	chr6:142596600-142597000	Enhancers	ES-I3 Cell Line	embryonic stem cell
30	chr6:142596800-142597200	Enhancers	H1 Cell Line	embryonic stem cell
31	chr6:142596800-142597200	Enhancers	H9 Cell Line	embryonic stem cell
32	chr6:142596800-142597200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr6:142596800-142597200	Enhancers	HUES48 Cell Line	embryonic stem cell
34	chr6:142596800-142597200	Enhancers	HUES6 Cell Line	embryonic stem cell
35	chr6:142596800-142597200	Weak transcription	Placenta Amnion	Placenta Amnion
36	chr6:142597000-142597400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr6:142597000-142597400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
38	chr6:142597000-142597800	Enhancers	A549	lung
39	chr6:142597000-142597800	Enhancers	HUVEC	blood vessel
40	chr6:142597000-142600200	Weak transcription	NHEK	skin
41	chr6:142597200-142597400	Enhancers	Placenta Amnion	Placenta Amnion
42	chr6:142597200-142597600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr6:142597200-142600000	Weak transcription	HepG2	liver
44	chr6:142597200-142600400	Weak transcription	HUES48 Cell Line	embryonic stem cell
45	chr6:142597200-142600400	Weak transcription	Fetal Intestine Large	intestine
46	chr6:142597400-142601000	Weak transcription	Placenta Amnion	Placenta Amnion
47	chr6:142597400-142601200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr6:142597400-142602000	Weak transcription	Placenta	Placenta
49	chr6:142597600-142597800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr6:142597600-142600200	Weak transcription	Fetal Intestine Small	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links