Variant report

Variant nsv831006
Chromosome Location chr7:53769412-53930274
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:53781800-53782200 Enhancers Fetal Adrenal Gland Adrenal Gland
2 chr7:53782200-53783400 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr7:53783400-53783800 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr7:53783600-53783800 Enhancers H9 Cell Line embryonic stem cell
5 chr7:53783800-53789000 Weak transcription H9 Cell Line embryonic stem cell
6 chr7:53785400-53785800 Enhancers Ovary ovary
7 chr7:53789000-53789200 Enhancers H9 Cell Line embryonic stem cell
8 chr7:53807000-53811400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr7:53811400-53811600 Enhancers NHEK skin
10 chr7:53811400-53812000 Enhancers HUES64 Cell Line embryonic stem cell
11 chr7:53811400-53812000 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr7:53811400-53812400 Enhancers HUES6 Cell Line embryonic stem cell
13 chr7:53811400-53812400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
14 chr7:53811400-53812400 Enhancers HMEC breast
15 chr7:53811400-53812600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr7:53811400-53812600 Enhancers Esophagus oesophagus
17 chr7:53811600-53812200 Flanking Active TSS NHEK skin
18 chr7:53811600-53812400 Enhancers iPS-15b Cell Line embryonic stem cell
19 chr7:53811800-53812200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr7:53811800-53812200 Enhancers HUES48 Cell Line embryonic stem cell
21 chr7:53811800-53812400 Enhancers H1 Cell Line embryonic stem cell
22 chr7:53812200-53812600 Active TSS Spleen Spleen
23 chr7:53812200-53812600 Enhancers NHEK skin
24 chr7:53827800-53828200 Enhancers Brain Hippocampus Middle brain
25 chr7:53832000-53837800 Weak transcription K562 blood
26 chr7:53836200-53836600 Enhancers Fetal Stomach stomach
27 chr7:53837800-53839200 Strong transcription K562 blood
28 chr7:53838200-53838800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr7:53839000-53839400 Active TSS Pancreatic Islets Pancreatic Islet
30 chr7:53839200-53847000 Weak transcription K562 blood
31 chr7:53839400-53844200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr7:53840400-53840800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr7:53840800-53843200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr7:53841200-53842000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr7:53843200-53843400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr7:53843400-53843600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr7:53844000-53844200 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr7:53844200-53844600 Active TSS Pancreatic Islets Pancreatic Islet
39 chr7:53844600-53844800 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr7:53844800-53845200 Enhancers Pancreatic Islets Pancreatic Islet
41 chr7:53847000-53847200 Strong transcription K562 blood
42 chr7:53847200-53848400 Weak transcription K562 blood
43 chr7:53861800-53862000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
44 chr7:53864000-53864400 Enhancers K562 blood
45 chr7:53868200-53868800 Enhancers iPS-18 Cell Line embryonic stem cell
46 chr7:53877200-53880200 Active TSS K562 blood
47 chr7:53879000-53879400 Active TSS NHEK skin
48 chr7:53879000-53879600 ZNF genes & repeats Fetal Intestine Large intestine
49 chr7:53879000-53879600 Active TSS Fetal Intestine Small intestine
50 chr7:53879000-53879600 Active TSS Right Ventricle heart

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