Variant report

Variant nsv831297
Chromosome Location chr8:39301121-39434693
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:39301000-39301200 Enhancers Fetal Lung lung
2 chr8:39301200-39302200 Weak transcription Fetal Lung lung
3 chr8:39302000-39302400 Enhancers Spleen Spleen
4 chr8:39302200-39302400 Enhancers Fetal Lung lung
5 chr8:39305400-39306400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr8:39317600-39318000 Enhancers iPS-20b Cell Line embryonic stem cell
7 chr8:39328200-39328600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr8:39328400-39328800 Enhancers H1 Cell Line embryonic stem cell
9 chr8:39328400-39329200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
10 chr8:39328400-39329400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
11 chr8:39328600-39329000 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr8:39328600-39329000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr8:39328600-39329200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr8:39328600-39329400 Active TSS iPS-20b Cell Line embryonic stem cell
15 chr8:39328600-39334800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr8:39328800-39329200 Active TSS H1 Cell Line embryonic stem cell
17 chr8:39328800-39329200 Active TSS iPS-18 Cell Line embryonic stem cell
18 chr8:39329200-39329400 Enhancers H1 Cell Line embryonic stem cell
19 chr8:39329200-39329400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr8:39334800-39335000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr8:39335000-39335800 Enhancers Fetal Lung lung
22 chr8:39335000-39340400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr8:39335400-39336400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
24 chr8:39335600-39337200 Enhancers Cortex derived primary cultured neurospheres brain
25 chr8:39335800-39336400 Flanking Active TSS Fetal Lung lung
26 chr8:39336000-39337200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr8:39336200-39336800 Enhancers HUES48 Cell Line embryonic stem cell
28 chr8:39336200-39337200 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr8:39336200-39337200 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr8:39336400-39337000 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr8:39336400-39337000 Active TSS Fetal Lung lung
32 chr8:39336800-39337200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr8:39338000-39338400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr8:39340400-39341000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr8:39343000-39345400 Enhancers Fetal Lung lung
36 chr8:39363600-39364000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr8:39368800-39369600 Enhancers GM12878-XiMat blood
38 chr8:39369200-39369600 Enhancers Fetal Intestine Large intestine
39 chr8:39374400-39375200 Enhancers Spleen Spleen
40 chr8:39378200-39378600 Enhancers Fetal Lung lung
41 chr8:39379600-39381800 Active TSS K562 blood
42 chr8:39380200-39380600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr8:39381800-39392400 Weak transcription K562 blood
44 chr8:39390200-39390400 Enhancers Fetal Intestine Large intestine
45 chr8:39390200-39390600 Enhancers Fetal Intestine Small intestine
46 chr8:39390400-39390600 Enhancers Fetal Heart heart
47 chr8:39390400-39391600 Weak transcription Fetal Intestine Large intestine
48 chr8:39391400-39391600 Active TSS ES-WA7 Cell Line embryonic stem cell
49 chr8:39391400-39392400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr8:39391600-39394000 Enhancers Fetal Intestine Large intestine

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