No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs546323377 |
chr9:12539033-12539034 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs540074117 |
chr9:12539034-12539035 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs144259206 |
chr9:12539044-12539045 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs377759747 |
chr9:12539084-12539085 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs564561954 |
chr9:12539102-12539103 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs370975164 |
chr9:12539117-12539118 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs72700779 |
chr9:12539122-12539123 |
Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
8 |
rs369886630 |
chr9:12539137-12539138 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs370791865 |
chr9:12539145-12539146 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs548520991 |
chr9:12539150-12539151 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs568606902 |
chr9:12539177-12539178 |
Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs534375853 |
chr9:12539245-12539246 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs554536680 |
chr9:12539268-12539269 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs535766703 |
chr9:12539280-12539281 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs555295090 |
chr9:12539308-12539309 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs191903989 |
chr9:12539317-12539318 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs375723084 |
chr9:12539321-12539322 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs369361932 |
chr9:12539330-12539331 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs112782948 |
chr9:12539334-12539335 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs374084523 |
chr9:12539350-12539351 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs541872250 |
chr9:12539353-12539354 |
Active TSS Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs184152254 |
chr9:12539422-12539423 |
Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs555151869 |
chr9:12539455-12539456 |
Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs376460882 |
chr9:12539461-12539462 |
Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs4741230 |
chr9:12539495-12539496 |
Active TSS Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
26 |
rs540823935 |
chr9:12539556-12539557 |
Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs374154489 |
chr9:12539579-12539580 |
Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs59860343 |
chr9:12539582-12539583 |
Active TSS Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs533017370 |
chr9:12539587-12539588 |
Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs564647420 |
chr9:12539606-12539607 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs188499012 |
chr9:12539610-12539611 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs73649619 |
chr9:12539633-12539634 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs531728391 |
chr9:12539655-12539656 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs192201876 |
chr9:12539684-12539685 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs530015286 |
chr9:12539687-12539688 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs386732767 |
chr9:12539719-12539720 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs10809790 |
chr9:12539720-12539721 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
38 |
rs10809791 |
chr9:12539723-12539724 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
39 |
rs529176462 |
chr9:12539730-12539731 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs571172307 |
chr9:12539736-12539737 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs111534431 |
chr9:12539753-12539754 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs115994082 |
chr9:12539759-12539760 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs368470394 |
chr9:12539773-12539774 |
Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs569665690 |
chr9:12539829-12539830 |
Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs535080567 |
chr9:12539843-12539844 |
Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs555485133 |
chr9:12539853-12539854 |
Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs571798621 |
chr9:12539908-12539909 |
Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs560295881 |
chr9:12539933-12539934 |
Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs367609748 |
chr9:12539938-12539939 |
Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs185045509 |
chr9:12539939-12539940 |
Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|