Variant report

Variant	nsv831521
Chromosome Location	chr9:15974174-16106565
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr9:16060750-16061133	GM12878	blood:	n/a	n/a
2	ATF2	chr9:16060647-16061176	GM12878	blood:	n/a	n/a
3	ATF2	chr9:16030527-16030923	GM12878	blood:	n/a	n/a
4	ATF3	chr9:16062763-16063305	HCT-116	colon:	n/a	n/a
5	ATF3	chr9:16062908-16063301	HCT-116	colon:	n/a	n/a
6	ATF3	chr9:16062761-16063303	A549	lung:	n/a	n/a
7	BATF	chr9:16046711-16046966	GM12878	blood:	n/a	n/a
8	BATF	chr9:16060743-16061148	GM12878	blood:	n/a	n/a
9	BATF	chr9:16030503-16030837	GM12878	blood:	n/a	chr9:16030712-16030722
10	BATF	chr9:16030529-16030841	GM12878	blood:	n/a	chr9:16030712-16030722
11	BATF	chr9:16062567-16062863	GM12878	blood:	n/a	n/a
12	BCL11A	chr9:16030497-16030868	GM12878	blood:	n/a	chr9:16030711-16030720
13	BCL11A	chr9:16060792-16061149	GM12878	blood:	n/a	n/a
14	BCL11A	chr9:16030563-16030805	GM12878	blood:	n/a	chr9:16030711-16030720
15	BHLHE40	chr9:16030533-16030834	GM12878	blood:	n/a	n/a
16	BHLHE40	chr9:16069309-16069354	HepG2	liver:	n/a	n/a
17	BHLHE40	chr9:16060676-16061037	GM12878	blood:	n/a	n/a
18	CBX3	chr9:16062787-16063294	HCT-116	colon:	n/a	n/a
19	CBX3	chr9:16030378-16031078	HCT-116	colon:	n/a	n/a
20	CBX3	chr9:16030498-16031118	HCT-116	colon:	n/a	n/a
21	CEBPB	chr9:16025734-16026185	IMR90	lung:	n/a	chr9:16025870-16025881
22	CEBPB	chr9:16049018-16049283	Hela-S3	cervix:	n/a	chr9:16049185-16049196
23	CEBPB	chr9:16026885-16027334	IMR90	lung:	n/a	n/a
24	CEBPB	chr9:16062761-16063670	A549	lung:	n/a	chr9:16063449-16063466 chr9:16063016-16063027 chr9:16063450-16063461 chr9:16063450-16063463 chr9:16063450-16063461
25	CEBPB	chr9:16062695-16063727	A549	lung:	n/a	chr9:16063449-16063466 chr9:16063016-16063027 chr9:16063450-16063461 chr9:16063450-16063463 chr9:16063450-16063461
26	CEBPB	chr9:15999599-16000359	IMR90	lung:	n/a	n/a
27	CEBPB	chr9:16025750-16026221	A549	lung:	n/a	chr9:16025870-16025881
28	CEBPB	chr9:16062837-16063527	A549	lung:	n/a	chr9:16063449-16063466 chr9:16063016-16063027 chr9:16063450-16063461 chr9:16063450-16063463 chr9:16063450-16063461
29	CEBPB	chr9:16091287-16091577	IMR90	lung:	n/a	chr9:16091443-16091456
30	CEBPB	chr9:15985947-15986280	A549	lung:	n/a	chr9:15986112-15986123 chr9:15986111-15986122 chr9:15986111-15986124
31	CEBPB	chr9:15999013-15999317	IMR90	lung:	n/a	chr9:15999159-15999170
32	CEBPB	chr9:16099335-16099508	HepG2	liver:	n/a	n/a
33	CEBPB	chr9:16064950-16065163	IMR90	lung:	n/a	chr9:16065064-16065075
34	CEBPB	chr9:15985970-15986263	HepG2	liver:	n/a	chr9:15986112-15986123 chr9:15986111-15986122 chr9:15986111-15986124
35	CEBPB	chr9:16053187-16053402	HepG2	liver:	n/a	chr9:16053306-16053317
36	CEBPB	chr9:15999666-16000309	A549	lung:	n/a	n/a
37	CEBPB	chr9:16002836-16003245	IMR90	lung:	n/a	chr9:16003091-16003102
38	CEBPB	chr9:16058124-16058404	IMR90	lung:	n/a	n/a
39	CEBPB	chr9:16101371-16101598	IMR90	lung:	n/a	chr9:16101471-16101482
40	CEBPB	chr9:16014658-16014823	IMR90	lung:	n/a	n/a
41	CEBPB	chr9:16062812-16063626	IMR90	lung:	n/a	chr9:16063449-16063466 chr9:16063016-16063027 chr9:16063450-16063461 chr9:16063450-16063463 chr9:16063450-16063461
42	CEBPB	chr9:16064893-16065151	HepG2	liver:	n/a	chr9:16065064-16065075
43	CEBPB	chr9:16062757-16063382	HCT-116	colon:	n/a	chr9:16063016-16063027
44	CEBPB	chr9:16062813-16063608	Hela-S3	cervix:	n/a	chr9:16063449-16063466 chr9:16063016-16063027 chr9:16063450-16063461 chr9:16063450-16063463 chr9:16063450-16063461
45	CEBPB	chr9:16062698-16063381	HCT-116	colon:	n/a	chr9:16063016-16063027
46	CEBPB	chr9:16062861-16063167	HepG2	liver:	n/a	chr9:16063016-16063027
47	CEBPB	chr9:16064962-16065202	A549	lung:	n/a	chr9:16065064-16065075
48	CEBPB	chr9:16049066-16049267	IMR90	lung:	n/a	chr9:16049185-16049196
49	CEBPB	chr9:16101365-16101584	A549	lung:	n/a	chr9:16101471-16101482
50	CEBPB	chr9:16025738-16026208	HepG2	liver:	n/a	chr9:16025870-16025881

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:16104365-16104415	AG10803	skin:	n/a
2	chr9:16104365-16104415	AG10803	skin:	n/a
3	chr9:16039921-16039971	NB4	blood:	n/a
4	chr9:16091885-16091935	CMK	blood:	n/a
5	chr9:16039921-16039971	HEEpiC	esophagus:	n/a
6	chr9:16069562-16069612	HMEC	breast:	n/a
7	chr9:16069562-16069612	NHDF-neo	bronchial:	n/a
8	chr9:16040625-16040675	HCT-116	colon:	n/a
9	chr9:16104365-16104415	HRE	kidney:	n/a
10	chr9:16040625-16040675	K562	blood:	n/a
11	chr9:16069562-16069612	Caco-2	colon:	n/a
12	chr9:16091885-16091935	IMR90	lung:	fetal
13	chr9:16091885-16091935	HCM	heart:	n/a
14	chr9:16091885-16091935	GM12892	blood:	n/a
15	chr9:16091885-16091935	GM06990	blood:	n/a
16	chr9:16091885-16091935	NHDF-neo	bronchial:	n/a
17	chr9:16039921-16039971	HL-60	blood:	n/a
18	chr9:16091885-16091935	HEEpiC	esophagus:	n/a
19	chr9:16069562-16069612	IMR90	lung:	fetal
20	chr9:16039921-16039971	PrEC	prostate:	n/a
21	chr9:16104365-16104415	HUVEC	blood vessel:	n/a
22	chr9:16091885-16091935	HCPEpiC	choroid plexus:	n/a
23	chr9:16040625-16040675	Hela-S3	cervix:	n/a
24	chr9:16044344-16044394	MCF-7	breast:	n/a
25	chr9:16040625-16040675	ProgFib	skin:	n/a
26	chr9:16069562-16069612	HCT-116	colon:	n/a
27	chr9:16091885-16091935	MCF-7	breast:	n/a
28	chr9:16044344-16044394	HCM	heart:	n/a
29	chr9:16044344-16044394	HCF	heart:	n/a
30	chr9:16091885-16091935	BJ	skin:	n/a
31	chr9:16044344-16044394	HepG2	liver:	n/a
32	chr9:16069562-16069612	HRE	kidney:	n/a
33	chr9:16091885-16091935	HL-60	blood:	n/a
34	chr9:16039921-16039971	HRPEpiC	eye:	n/a
35	chr9:16091885-16091935	T-47D	breast:	n/a
36	chr9:16069562-16069612	HCF	heart:	n/a
37	chr9:16091885-16091935	RPTEC	kidney:	n/a
38	chr9:16091885-16091935	H1-hESC	embryonic stem cell:	embryo
39	chr9:16104365-16104415	GM19239	blood:	n/a
40	chr9:16069562-16069612	AG09319	gingival:	n/a
41	chr9:16069562-16069612	T-47D	breast:	n/a
42	chr9:16091885-16091935	U87	brain:	n/a
43	chr9:16069562-16069612	MCF10A-Er-Src	breast:	n/a
44	chr9:16039921-16039971	SAEC	small airway:	n/a
45	chr9:16069562-16069612	A549	lung:	n/a
46	chr9:16040625-16040675	SK-N-MC	brain:	n/a
47	chr9:16069562-16069612	GM06990	blood:	n/a
48	chr9:16069562-16069612	NHBE	bronchial:	n/a
49	chr9:16039921-16039971	NH-A	brain:	n/a
50	chr9:16069562-16069612	AG04450	lung:	fetal

No.	Distal block	Cell Line	Cell type
1	chr9:16032565..16033224-chr9:16133403..16134072,3	MCF-7	breast:
2	chr9:16080117..16082951-chr9:16084939..16087066,2	K562	blood:
3	chr9:16080117..16082951-chr9:16084939..16087066,2	K562	blood:
4	chr9:16080126..16081905-chr9:16084168..16087016,2	MCF-7	breast:
5	chr9:16039283..16040078-chr9:16131109..16131609,2	MCF-7	breast:
6	chr9:16039127..16039773-chr9:16131360..16131916,2	MCF-7	breast:
7	chr9:16063712..16066364-chr9:16092575..16094646,2	MCF-7	breast:
8	chr9:16032646..16033464-chr9:16130747..16131983,3	MCF-7	breast:
9	chr9:16074686..16077163-chr9:16077255..16078933,2	MCF-7	breast:
10	chr9:16064268..16067195-chr9:16080044..16082356,2	MCF-7	breast:
11	chr9:16074686..16077163-chr9:16077255..16078933,2	MCF-7	breast:
12	chr9:16080126..16081905-chr9:16084168..16087016,2	MCF-7	breast:
13	chr9:16063712..16066364-chr9:16092575..16094646,2	MCF-7	breast:
14	chr9:16064268..16067195-chr9:16080044..16082356,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SNAPC3-1	chr9:16060644-16060851	XLOC_007290
2	lnc-SNAPC3-1	chr9:16042796-16042918	XLOC_007290
3	lnc-SNAPC3-1	chr9:16022330-16022583	NONHSAT130279
4	lnc-SNAPC3-1	chr9:16042796-16042918	XLOC_007290
5	lnc-SNAPC3-1	chr9:16060644-16061318	NONHSAT130282
6	lnc-SNAPC3-1	chr9:16042796-16042884	NONHSAT130282
7	lnc-SNAPC3-1	chr9:16022737-16022906	NONHSAT130279
8	lnc-SNAPC3-1	chr9:16020587-16020792	NONHSAT130279
9	lnc-SNAPC3-1	chr9:16060644-16061661	NONHSAT130279
10	lnc-SNAPC3-1	chr9:16035383-16035523	XLOC_007290
11	lnc-SNAPC3-1	chr9:16036091-16036204	NONHSAT130279
12	lnc-SNAPC3-1	chr9:16060644-16061855	XLOC_007290
13	lnc-SNAPC3-1	chr9:16036091-16036204	XLOC_007290
14	lnc-SNAPC3-1	chr9:16035455-16035523	NONHSAT130279
15	lnc-SNAPC3-1	chr9:16042796-16042918	NONHSAT130279
16	lnc-SNAPC3-1	chr9:16036091-16036204	XLOC_007290

Variant related genes	Relation type
CCDC171	TF binding region
CCDC171	CpG island
MLL3	miRNA target sites
RAB6A	miRNA target sites
DACT1	miRNA target sites
CDC42EP3	miRNA target sites
PEMT	miRNA target sites

Extended variants
information (count: 5472 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:5472 , 50 per page) page: 1 2 3 4 5 6 7 ... 110

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs532138518	chr9:15974194-15974195	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs77855935	chr9:15974202-15974203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs187579914	chr9:15974238-15974239	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs192458951	chr9:15974291-15974292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs548430170	chr9:15974292-15974293	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs183799107	chr9:15974295-15974296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs200000341	chr9:15974302-15974303	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs10962242	chr9:15974315-15974316	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs565748118	chr9:15974346-15974347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs530583856	chr9:15974351-15974352	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs146692178	chr9:15974368-15974369	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs16933838	chr9:15974372-15974373	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs535026520	chr9:15974373-15974374	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs551632517	chr9:15974383-15974384	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs553082775	chr9:15974393-15974394	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs568461060	chr9:15974411-15974412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs377579409	chr9:15974450-15974451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs386733056	chr9:15974495-15974496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs557199233	chr9:15974496-15974497	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs3008745	chr9:15974512-15974513	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs546035654	chr9:15974537-15974538	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs118001026	chr9:15974582-15974583	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs546824230	chr9:15974603-15974604	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs141364823	chr9:15974629-15974630	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs188758638	chr9:15974686-15974687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs35211181	chr9:15974721-15974722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs111603478	chr9:15974732-15974733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs530054009	chr9:15974755-15974756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs151291604	chr9:15974759-15974760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs563548594	chr9:15974800-15974801	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs530737750	chr9:15974859-15974860	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs72710707	chr9:15974878-15974879	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs570966687	chr9:15974922-15974923	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs528575171	chr9:15974935-15974936	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs140626820	chr9:15974969-15974970	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs150470781	chr9:15975000-15975001	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs535428540	chr9:15975012-15975013	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs550863758	chr9:15975023-15975024	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs368814422	chr9:15975025-15975026	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs569407859	chr9:15975047-15975048	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs10756730	chr9:15975069-15975070	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs558063090	chr9:15975092-15975093	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs576896513	chr9:15975110-15975111	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs10962243	chr9:15975160-15975161	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs34267502	chr9:15975175-15975176	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs534406425	chr9:15975224-15975225	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs553072940	chr9:15975228-15975229	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs574509475	chr9:15975253-15975254	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs541801050	chr9:15975369-15975370	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs563585547	chr9:15975379-15975380	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21611746	CNVD
Glycine encephalopathy	21572526	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	19835627	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:979 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15952600-15987600	Weak transcription	Primary hematopoietic stem cells	blood
2	chr9:15973000-15977200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr9:15973200-15988000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr9:15974800-15976200	Enhancers	Liver	Liver
5	chr9:15981800-15982800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr9:15982200-15982400	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr9:15982200-15982400	Enhancers	Fetal Kidney	kidney
8	chr9:15982400-15982800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr9:15986200-15986800	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr9:15987600-15988400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
11	chr9:15987800-15989000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr9:15988000-15988600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr9:15988600-15989000	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr9:15997600-15998400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr9:15998400-15999400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr9:15998600-15999400	Enhancers	Muscle Satellite Cultured Cells	--
17	chr9:15998600-15999600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr9:15998800-15999400	Enhancers	NH-A	brain
19	chr9:15999000-16001200	Enhancers	NHLF	lung
20	chr9:15999000-16001600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr9:15999000-16003200	Enhancers	NHDF-Ad	bronchial
22	chr9:15999000-16003600	Enhancers	HMEC	breast
23	chr9:15999200-15999400	Enhancers	Osteobl	bone
24	chr9:15999200-16000000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr9:15999200-16001600	Enhancers	NHEK	skin
26	chr9:15999400-15999800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr9:15999400-15999800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr9:15999400-15999800	Flanking Active TSS	Osteobl	bone
29	chr9:15999400-16000200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
30	chr9:15999400-16000200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr9:15999400-16000200	Flanking Active TSS	NH-A	brain
32	chr9:15999400-16000400	Enhancers	HUVEC	blood vessel
33	chr9:15999400-16000600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr9:15999400-16000600	Enhancers	HSMM	muscle
35	chr9:15999400-16001600	Enhancers	Hela-S3	cervix
36	chr9:15999400-16002400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr9:15999400-16002400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr9:15999400-16002800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr9:15999600-15999800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr9:15999600-15999800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr9:15999600-16000000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
42	chr9:15999600-16000000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr9:15999600-16000000	Enhancers	A549	lung
44	chr9:15999600-16000200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr9:15999600-16000200	Enhancers	Placenta Amnion	Placenta Amnion
46	chr9:15999600-16000600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr9:15999800-16000000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr9:15999800-16003600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr9:15999800-16003600	Enhancers	Osteobl	bone
50	chr9:15999800-16003800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links