Variant report

Variant	nsv831878
Chromosome Location	chr10:54902106-55085586
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr10:55025742-55025775	K562	blood:	n/a	n/a
2	BACH1	chr10:54999946-54999953	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCL11A	chr10:54926130-54926399	GM12878	blood:	n/a	n/a
4	BHLHE40	chr10:54974049-54974075	GM12878	blood:	n/a	n/a
5	BRCA1	chr10:55040336-55040499	GM12878	blood:	n/a	n/a
6	CCNT2	chr10:54935491-54935665	K562	blood:	n/a	n/a
7	CEBPB	chr10:55063756-55064049	A549	lung:	n/a	n/a
8	CEBPB	chr10:55054100-55054129	K562	blood:	n/a	n/a
9	CEBPB	chr10:55063709-55063996	H1-hESC	embryonic stem cell:	n/a	n/a
10	CEBPB	chr10:55063725-55064069	HepG2	liver:	n/a	n/a
11	CEBPB	chr10:55016818-55017080	HepG2	liver:	n/a	n/a
12	CEBPB	chr10:55063815-55064038	Hela-S3	cervix:	n/a	n/a
13	CEBPB	chr10:55030411-55030719	IMR90	lung:	n/a	chr10:55030581-55030592
14	CEBPB	chr10:55070800-55070915	H1-hESC	embryonic stem cell:	n/a	chr10:55070859-55070872 chr10:55070861-55070870 chr10:55070861-55070870 chr10:55070861-55070870
15	CEBPB	chr10:54923292-54923632	IMR90	lung:	n/a	chr10:54923452-54923463 chr10:54923453-54923464 chr10:54923452-54923465 chr10:54923540-54923553 chr10:54923452-54923465
16	CEBPB	chr10:54925499-54926039	HepG2	liver:	n/a	chr10:54925626-54925635 chr10:54925952-54925963
17	CEBPB	chr10:54923353-54923602	H1-hESC	embryonic stem cell:	n/a	chr10:54923452-54923463 chr10:54923453-54923464 chr10:54923452-54923465 chr10:54923540-54923553 chr10:54923452-54923465
18	CEBPB	chr10:55016353-55016995	H1-hESC	embryonic stem cell:	n/a	chr10:55016409-55016420
19	CEBPB	chr10:55016346-55017038	Hela-S3	cervix:	n/a	chr10:55016409-55016420
20	CEBPB	chr10:54923327-54923634	HepG2	liver:	n/a	chr10:54923452-54923463 chr10:54923453-54923464 chr10:54923452-54923465 chr10:54923540-54923553 chr10:54923452-54923465
21	CEBPB	chr10:54980854-54980893	K562	blood:	n/a	chr10:54980869-54980880 chr10:54980870-54980879
22	CEBPB	chr10:55030423-55030723	A549	lung:	n/a	chr10:55030581-55030592
23	CEBPB	chr10:55077103-55077366	H1-hESC	embryonic stem cell:	n/a	chr10:55077105-55077118 chr10:55077104-55077121
24	CEBPB	chr10:54980735-54981000	HepG2	liver:	n/a	chr10:54980869-54980880 chr10:54980870-54980879
25	CEBPB	chr10:55030432-55030743	HepG2	liver:	n/a	chr10:55030581-55030592
26	CEBPB	chr10:54925785-54926072	A549	lung:	n/a	chr10:54925952-54925963
27	CEBPB	chr10:54925498-54925781	H1-hESC	embryonic stem cell:	n/a	chr10:54925626-54925635
28	CEBPB	chr10:54923315-54923598	K562	blood:	n/a	chr10:54923452-54923463 chr10:54923453-54923464 chr10:54923452-54923465 chr10:54923540-54923553 chr10:54923452-54923465
29	CEBPB	chr10:55074637-55075013	IMR90	lung:	n/a	n/a
30	CEBPB	chr10:55030433-55030717	Hela-S3	cervix:	n/a	chr10:55030581-55030592
31	CEBPB	chr10:54980728-54981011	IMR90	lung:	n/a	chr10:54980869-54980880 chr10:54980870-54980879
32	CEBPB	chr10:55070715-55071009	IMR90	lung:	n/a	chr10:55070859-55070872 chr10:55070861-55070870 chr10:55070861-55070870 chr10:55070861-55070870
33	CEBPB	chr10:54923324-54923567	A549	lung:	n/a	chr10:54923452-54923463 chr10:54923453-54923464 chr10:54923452-54923465 chr10:54923540-54923553 chr10:54923452-54923465
34	CEBPB	chr10:54925569-54926037	IMR90	lung:	n/a	chr10:54925626-54925635 chr10:54925952-54925963
35	CEBPB	chr10:55030463-55030602	H1-hESC	embryonic stem cell:	n/a	chr10:55030581-55030592
36	CEBPB	chr10:55063721-55064073	IMR90	lung:	n/a	n/a
37	CTCF	chr10:55058340-55058490	MCF-7	breast:	n/a	n/a
38	CTCF	chr10:54969800-54969950	HPF	lung:	n/a	chr10:54969895-54969916 chr10:54969893-54969911 chr10:54969898-54969906
39	CTCF	chr10:54969820-54969970	MCF-7	breast:	n/a	chr10:54969895-54969916 chr10:54969893-54969911 chr10:54969898-54969906
40	CTCF	chr10:54948180-54948330	HEK293	kidney:	n/a	n/a
41	CTCF	chr10:54948255-54948298	H1-hESC	embryonic stem cell:	n/a	n/a
42	CTCF	chr10:54969860-54970010	HA-sp	spinal cord:	n/a	chr10:54969895-54969916 chr10:54969893-54969911 chr10:54969898-54969906
43	CTCF	chr10:54969780-54969930	Hela-S3	cervix:	n/a	chr10:54969895-54969916 chr10:54969893-54969911 chr10:54969898-54969906
44	CTCF	chr10:55075579-55075750	LNCaP	prostate:	n/a	n/a
45	CTCF	chr10:55016640-55016790	HMEC	breast:	n/a	n/a
46	CTCF	chr10:54969680-54969830	HAc	cerebellar:	n/a	n/a
47	CTCF	chr10:54981920-54981966	GM10248	blood:	n/a	n/a
48	CTCF	chr10:54969819-54969952	HepG2	liver:	n/a	chr10:54969895-54969916 chr10:54969893-54969911 chr10:54969898-54969906
49	CTCF	chr10:54969820-54969970	HCPEpiC	choroid plexus:	n/a	chr10:54969895-54969916 chr10:54969893-54969911 chr10:54969898-54969906
50	CTCF	chr10:54969840-54969990	AoAF	blood vessel:	n/a	chr10:54969895-54969916 chr10:54969893-54969911 chr10:54969898-54969906

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:55016939-55016989	HCPEpiC	choroid plexus:	n/a
2	chr10:54984564-54984614	HCPEpiC	choroid plexus:	n/a
3	chr10:54984564-54984614	HCF	heart:	n/a
4	chr10:55016939-55016989	HCT-116	colon:	n/a
5	chr10:54969710-54969760	HPAEpiC	pulmonary alveolar:	n/a
6	chr10:54984564-54984614	SK-N-SH	brain:	n/a
7	chr10:55016939-55016989	GM19239	blood:	n/a
8	chr10:54969710-54969760	PFSK-1	brain:	n/a
9	chr10:54984564-54984614	HMEC	breast:	n/a
10	chr10:54969710-54969760	NHDF-neo	bronchial:	n/a
11	chr10:54969710-54969760	HEK293	kidney:	embryo
12	chr10:55016939-55016989	GM06990	blood:	n/a
13	chr10:55016939-55016989	Hepatocyte	liver:	n/a
14	chr10:55016939-55016989	HCM	heart:	n/a
15	chr10:54984564-54984614	ECC-1	luminal epithelium:	n/a
16	chr10:54984564-54984614	NHDF-neo	bronchial:	n/a
17	chr10:55016939-55016989	HL-60	blood:	n/a
18	chr10:55016939-55016989	AoSMC	blood vessel:	n/a
19	chr10:54984564-54984614	NHBE	bronchial:	n/a
20	chr10:54969710-54969760	BE2_C	brain:	n/a
21	chr10:54984564-54984614	HAEpiC	amniotic membrane:	n/a
22	chr10:55016939-55016989	A549	lung:	n/a
23	chr10:54984564-54984614	Caco-2	colon:	n/a
24	chr10:54984564-54984614	HCM	heart:	n/a
25	chr10:54969710-54969760	Hela-S3	cervix:	n/a
26	chr10:54984564-54984614	Jurkat	blood:	n/a
27	chr10:54969710-54969760	Caco-2	colon:	n/a
28	chr10:54969710-54969760	IMR90	lung:	fetal
29	chr10:54984564-54984614	RPTEC	kidney:	n/a
30	chr10:55016939-55016989	HepG2	liver:	n/a
31	chr10:54984564-54984614	PFSK-1	brain:	n/a
32	chr10:54969710-54969760	SK-N-MC	brain:	n/a
33	chr10:55016939-55016989	HPAEpiC	pulmonary alveolar:	n/a
34	chr10:54969710-54969760	CMK	blood:	n/a
35	chr10:55016939-55016989	HRCEpiC	kidney:	n/a
36	chr10:55016939-55016989	MCF-7	breast:	n/a
37	chr10:54984564-54984614	HUVEC	blood vessel:	n/a
38	chr10:54984564-54984614	SKMC	muscle:	n/a
39	chr10:55016939-55016989	AG09309	skin:	n/a
40	chr10:54984564-54984614	MCF-7	breast:	n/a
41	chr10:54969710-54969760	HL-60	blood:	n/a
42	chr10:55016939-55016989	HRE	kidney:	n/a
43	chr10:54969710-54969760	MCF10A-Er-Src	breast:	n/a
44	chr10:54969710-54969760	AG04450	lung:	fetal
45	chr10:54984564-54984614	SAEC	small airway:	n/a
46	chr10:54969710-54969760	K562	blood:	n/a
47	chr10:55016939-55016989	U87	brain:	n/a
48	chr10:54969710-54969760	ovcar-3	ovarian:	n/a
49	chr10:55016939-55016989	K562	blood:	n/a
50	chr10:55016939-55016989	ovcar-3	ovarian:	n/a

No.	Distal block	Cell Line	Cell type
1	chr10:55015124..55017354-chr10:55018929..55021209,2	K562	blood:
2	chr10:54912408..54915011-chr10:54917539..54919981,2	MCF-7	breast:
3	chr10:54912408..54915011-chr10:54917539..54919981,2	MCF-7	breast:
4	chr10:54974391..54976394-chr10:54976441..54978497,2	MCF-7	breast:
5	chr10:55028156..55030475-chr10:55032367..55034713,2	K562	blood:
6	chr10:55028156..55030475-chr10:55032367..55034713,2	K562	blood:
7	chr10:55015124..55017354-chr10:55018929..55021209,2	K562	blood:
8	chr10:55028397..55030475-chr10:55031728..55034713,2	K562	blood:
9	chr10:55028397..55030475-chr10:55031728..55034713,2	K562	blood:
10	chr10:55057963..55058535-chr10:55568196..55569129,2	MCF-7	breast:
11	chr10:55010159..55011051-chr10:101190203..101191138,2	Hela-S3	cervix:
12	chr10:54974391..54976394-chr10:54976441..54978497,2	MCF-7	breast:
13	chr10:54961525..54963201-chr10:54972554..54974128,2	K562	blood:
14	chr10:54961525..54963201-chr10:54972554..54974128,2	K562	blood:
15	chr1:121484537..121485403-chr10:54967003..54967520,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PCDH15-1	chr10:55050832-55051354	XLOC_008827
2	lnc-PCDH15-1	chr10:55070752-55070825	XLOC_008827

Variant related genes	Relation type
ENSG00000226296	TF binding region
ENSG00000226296	CpG island
ENSG00000120053	chromatin interactions
ENSG00000224934	chromatin interactions

Extended variants
information (count: 4259 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:4259 , 50 per page) page: 1 2 3 4 5 6 7 ... 86

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567172324	chr10:54902112-54902113	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs553207429	chr10:54902115-54902116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs10824900	chr10:54902142-54902143	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs552747100	chr10:54902165-54902166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs10508989	chr10:54902194-54902195	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs538387601	chr10:54902216-54902217	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs79759388	chr10:54902264-54902265	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs376553527	chr10:54902266-54902267	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs184946298	chr10:54902285-54902286	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs534201467	chr10:54902308-54902309	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs11003411	chr10:54902351-54902352	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs138153122	chr10:54902362-54902363	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs10824901	chr10:54902367-54902368	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs189660299	chr10:54902414-54902415	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs76990393	chr10:54902417-54902418	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs180948547	chr10:54902446-54902447	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs560663094	chr10:54902471-54902472	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs11003412	chr10:54902492-54902493	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs143628331	chr10:54902526-54902527	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs559850696	chr10:54902535-54902536	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs185467580	chr10:54902549-54902550	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs575911133	chr10:54902552-54902553	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs191592037	chr10:54902554-54902555	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs569499588	chr10:54902592-54902593	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs538424407	chr10:54902615-54902616	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs548766081	chr10:54902619-54902620	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs544524853	chr10:54902623-54902624	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs150596646	chr10:54902660-54902661	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs534238679	chr10:54902682-54902683	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs139613570	chr10:54902696-54902697	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs183289338	chr10:54902798-54902799	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs950899	chr10:54902799-54902800	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs199653004	chr10:54902833-54902834	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs558551734	chr10:54902848-54902849	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs575132949	chr10:54902898-54902899	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs149670805	chr10:54902899-54902900	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs950898	chr10:54902945-54902946	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs188682345	chr10:54902950-54902951	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs144427208	chr10:54902951-54902952	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs72802382	chr10:54902957-54902958	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs191859564	chr10:54902967-54902968	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs546510217	chr10:54902991-54902992	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs183414408	chr10:54902999-54903000	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs950897	chr10:54903009-54903010	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs368195875	chr10:54903040-54903041	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs568629904	chr10:54903044-54903045	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs527829122	chr10:54903046-54903047	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs950896	chr10:54903084-54903085	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs570854839	chr10:54903109-54903110	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs139203056	chr10:54903125-54903126	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Obesity	21956041	CNVD
Developmental delay	21948486	CNVD
Dysmorphic features	21948486	CNVD
Epilepsy	21948486	CNVD
Intellectual disability	21948486	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16272173	CNVD
Metanephric adenoma	20802469	CNVD
Autism	20841430	CNVD
Mental retardation	17124404	CNVD
Epilepsy	20923578	CNVD
Prostate cancer	16573809	CNVD
Schizophrenia	19329560	CNVD
Heart failure	18772530	CNVD
Heart failure	18854381	CNVD
Hyperglycemia	19060297	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Glioblastoma multiforme	22286061	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Usher syndrome	20538994	CNVD
Glioblastoma multiforme	17002787	CNVD
Colorectal cancer	16774939	CNVD
Autism	20858243	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:225 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:54900800-54902600	Weak transcription	Fetal Intestine Small	intestine
2	chr10:54902200-54902600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr10:54902600-54903200	Enhancers	Fetal Intestine Small	intestine
4	chr10:54908800-54909000	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
5	chr10:54909400-54909600	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
6	chr10:54910200-54910400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
7	chr10:54910200-54910400	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
8	chr10:54910200-54910400	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
9	chr10:54910200-54910400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
10	chr10:54910800-54911000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
11	chr10:54918000-54918400	Enhancers	Stomach Mucosa	stomach
12	chr10:54922000-54922600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr10:54922600-54923200	Enhancers	Liver	Liver
14	chr10:54934000-54934400	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr10:54934000-54934400	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr10:54935000-54935200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr10:54936800-54938000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
18	chr10:54951400-54951600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
19	chr10:54951600-54960800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr10:54960800-54961200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
21	chr10:54961200-54965000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr10:54964200-54966000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
23	chr10:54965000-54965400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
24	chr10:54965400-54966400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr10:54966000-54969600	Weak transcription	HUES64 Cell Line	embryonic stem cell
26	chr10:54966400-54981600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr10:54968600-54968800	Enhancers	H1 Cell Line	embryonic stem cell
28	chr10:54968600-54970800	Enhancers	iPS-18 Cell Line	embryonic stem cell
29	chr10:54968800-54970000	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr10:54968800-54970200	Enhancers	HUES6 Cell Line	embryonic stem cell
31	chr10:54968800-54970600	Enhancers	iPS-20b Cell Line	embryonic stem cell
32	chr10:54969400-54970400	Enhancers	ES-I3 Cell Line	embryonic stem cell
33	chr10:54969600-54970400	Enhancers	HUES48 Cell Line	embryonic stem cell
34	chr10:54969600-54970400	Enhancers	iPS-15b Cell Line	embryonic stem cell
35	chr10:54969600-54970800	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr10:54969800-54970200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr10:54969800-54970400	Enhancers	Breast Myoepithelial Primary Cells	Breast
38	chr10:54970000-54970400	Enhancers	H1 Cell Line	embryonic stem cell
39	chr10:54970000-54970400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr10:54970000-54970400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr10:54970000-54970400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr10:54970400-54974600	Weak transcription	HUES48 Cell Line	embryonic stem cell
43	chr10:54970800-54971400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr10:54971400-54971600	Enhancers	iPS-18 Cell Line	embryonic stem cell
45	chr10:54972600-54972800	Enhancers	HUES64 Cell Line	embryonic stem cell
46	chr10:54979600-54980000	Enhancers	Fetal Heart	heart
47	chr10:54981600-54983200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr10:54981600-54983200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
49	chr10:54982000-54984000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr10:54982200-54982400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links