Variant report

Variant	nsv832111
Chromosome Location	chr11:33368323-33547687
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1384)
CpG islands
(count:1101)
Chromatin interactive
region (count:79)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:13)

(count:1384 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:33467294-33467606	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:33394101-33394301	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:33529658-33529797	K562	blood:	n/a	n/a
4	ARID3A	chr11:33383925-33384254	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:33383912-33384198	K562	blood:	n/a	n/a
6	ARID3A	chr11:33499524-33499864	HepG2	liver:	n/a	n/a
7	ATF1	chr11:33394198-33394335	K562	blood:	n/a	n/a
8	ATF2	chr11:33404441-33405009	GM12878	blood:	n/a	n/a
9	ATF2	chr11:33409013-33410089	GM12878	blood:	n/a	n/a
10	ATF2	chr11:33547216-33547636	GM12878	blood:	n/a	n/a
11	ATF2	chr11:33411036-33411671	GM12878	blood:	n/a	n/a
12	ATF2	chr11:33404542-33405049	GM12878	blood:	n/a	n/a
13	ATF2	chr11:33409042-33410013	GM12878	blood:	n/a	n/a
14	ATF3	chr11:33382233-33382453	K562	blood:	n/a	chr11:33382358-33382372
15	BACH1	chr11:33397385-33398563	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr11:33411172-33411511	GM12878	blood:	n/a	n/a
17	BATF	chr11:33404575-33404911	GM12878	blood:	n/a	n/a
18	BATF	chr11:33547673-33547858	GM12878	blood:	n/a	n/a
19	BATF	chr11:33408990-33409983	GM12878	blood:	n/a	n/a
20	BATF	chr11:33409566-33409855	GM12878	blood:	n/a	n/a
21	BATF	chr11:33547665-33547985	GM12878	blood:	n/a	n/a
22	BATF	chr11:33404521-33404947	GM12878	blood:	n/a	n/a
23	BCL11A	chr11:33409556-33409888	GM12878	blood:	n/a	n/a
24	BCL11A	chr11:33409572-33409836	GM12878	blood:	n/a	n/a
25	BCL11A	chr11:33404557-33404945	GM12878	blood:	n/a	n/a
26	BCL11A	chr11:33409034-33409543	GM12878	blood:	n/a	n/a
27	BCL3	chr11:33409282-33409904	GM12878	blood:	n/a	n/a
28	BCL3	chr11:33512690-33512977	GM12878	blood:	n/a	n/a
29	BCL3	chr11:33547150-33547634	GM12878	blood:	n/a	n/a
30	BCL3	chr11:33404619-33404913	GM12878	blood:	n/a	n/a
31	BCLAF1	chr11:33404519-33404990	GM12878	blood:	n/a	n/a
32	BCLAF1	chr11:33409067-33410001	GM12878	blood:	n/a	n/a
33	BCLAF1	chr11:33409061-33410037	GM12878	blood:	n/a	n/a
34	BHLHE40	chr11:33484666-33484886	K562	blood:	n/a	n/a
35	BHLHE40	chr11:33404539-33405771	GM12878	blood:	n/a	n/a
36	BHLHE40	chr11:33401529-33401825	GM12878	blood:	n/a	n/a
37	BHLHE40	chr11:33427892-33427983	K562	blood:	n/a	n/a
38	BHLHE40	chr11:33369101-33369338	GM12878	blood:	n/a	n/a
39	BHLHE40	chr11:33529628-33529796	K562	blood:	n/a	n/a
40	CCNT2	chr11:33544760-33544923	K562	blood:	n/a	n/a
41	CEBPB	chr11:33529315-33530057	A549	lung:	n/a	chr11:33529678-33529689
42	CEBPB	chr11:33422567-33422729	HepG2	liver:	n/a	chr11:33422604-33422615
43	CEBPB	chr11:33529486-33529976	K562	blood:	n/a	chr11:33529678-33529689
44	CEBPB	chr11:33499603-33499920	H1-hESC	embryonic stem cell:	n/a	chr11:33499751-33499762
45	CEBPB	chr11:33529433-33529899	A549	lung:	n/a	chr11:33529678-33529689
46	CEBPB	chr11:33382210-33382548	K562	blood:	n/a	n/a
47	CEBPB	chr11:33382195-33382506	K562	blood:	n/a	n/a
48	CEBPB	chr11:33532945-33533237	A549	lung:	n/a	chr11:33533070-33533081 chr11:33533079-33533091
49	CEBPB	chr11:33529498-33529926	HepG2	liver:	n/a	chr11:33529678-33529689
50	CEBPB	chr11:33529283-33530043	HCT-116	colon:	n/a	chr11:33529678-33529689

(count:1101 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:33453389-33453439	GM12878	blood:	n/a
2	chr11:33398366-33398416	A549	lung:	n/a
3	chr11:33396983-33397033	HNPCEpiC	eye:	n/a
4	chr11:33453389-33453439	GM12878	blood:	n/a
5	chr11:33398366-33398416	A549	lung:	n/a
6	chr11:33396983-33397033	HNPCEpiC	eye:	n/a
7	chr11:33375412-33375462	HCM	heart:	n/a
8	chr11:33397387-33397437	AG09309	skin:	n/a
9	chr11:33398245-33398295	Hela-S3	cervix:	n/a
10	chr11:33397689-33397739	AG04449	skin:	fetal
11	chr11:33453389-33453439	HCM	heart:	n/a
12	chr11:33400574-33400624	HCT-116	colon:	n/a
13	chr11:33399978-33400028	MCF10A-Er-Src	breast:	n/a
14	chr11:33397689-33397739	BE2_C	brain:	n/a
15	chr11:33453389-33453439	T-47D	breast:	n/a
16	chr11:33397387-33397437	HL-60	blood:	n/a
17	chr11:33398245-33398295	AG09309	skin:	n/a
18	chr11:33397153-33397203	MCF-7	breast:	n/a
19	chr11:33398245-33398295	AG10803	skin:	n/a
20	chr11:33474484-33474534	AG10803	skin:	n/a
21	chr11:33453389-33453439	IMR90	lung:	fetal
22	chr11:33394273-33394323	Hepatocyte	liver:	n/a
23	chr11:33398173-33398223	AoSMC	blood vessel:	n/a
24	chr11:33399978-33400028	ProgFib	skin:	n/a
25	chr11:33396859-33396909	HCPEpiC	choroid plexus:	n/a
26	chr11:33399978-33400028	AG04449	skin:	fetal
27	chr11:33442321-33442371	AG09319	gingival:	n/a
28	chr11:33394273-33394323	NHBE	bronchial:	n/a
29	chr11:33398173-33398223	SAEC	small airway:	n/a
30	chr11:33442321-33442371	HCF	heart:	n/a
31	chr11:33400574-33400624	K562	blood:	n/a
32	chr11:33396983-33397033	HEEpiC	esophagus:	n/a
33	chr11:33442321-33442371	AG04450	lung:	fetal
34	chr11:33397679-33397729	BJ	skin:	n/a
35	chr11:33396859-33396909	MCF10A-Er-Src	breast:	n/a
36	chr11:33397679-33397729	HNPCEpiC	eye:	n/a
37	chr11:33453389-33453439	GM12892	blood:	n/a
38	chr11:33397153-33397203	HL-60	blood:	n/a
39	chr11:33397821-33397871	PrEC	prostate:	n/a
40	chr11:33397387-33397437	MCF-7	breast:	n/a
41	chr11:33397689-33397739	NHDF-neo	bronchial:	n/a
42	chr11:33396859-33396909	SK-N-SH_RA	brain:	n/a
43	chr11:33397821-33397871	HepG2	liver:	n/a
44	chr11:33375412-33375462	IMR90	lung:	fetal
45	chr11:33506184-33506234	HepG2	liver:	n/a
46	chr11:33397679-33397729	SK-N-SH_RA	brain:	n/a
47	chr11:33394273-33394323	GM19239	blood:	n/a
48	chr11:33397689-33397739	PANC-1	pancreas:	n/a
49	chr11:33397689-33397739	RPTEC	kidney:	n/a
50	chr11:33399978-33400028	HCM	heart:	n/a

(count:79 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:33475872..33478381-chr11:33480677..33482697,2	MCF-7	breast:
2	chr11:33351340..33351943-chr11:33383658..33384527,2	K562	blood:
3	chr11:33429478..33432664-chr11:33434233..33436615,3	K562	blood:
4	chr11:33396319..33398155-chr11:33401081..33403706,2	MCF-7	breast:
5	chr11:33151982..33154507-chr11:33378792..33381624,2	K562	blood:
6	chr11:33179272..33181255-chr11:33382560..33384208,2	K562	blood:
7	chr11:33404576..33406306-chr11:33408202..33410856,2	MCF-7	breast:
8	chr11:33495157..33498013-chr11:33505516..33507926,2	K562	blood:
9	chr11:33375467..33377991-chr11:33379064..33381208,2	MCF-7	breast:
10	chr11:33432981..33435559-chr11:33436354..33439310,2	K562	blood:
11	chr11:33530109..33532353-chr11:33535531..33537210,2	K562	blood:
12	chr11:33517532..33520480-chr11:33524551..33527358,2	K562	blood:
13	chr11:33464022..33465573-chr11:33469227..33471332,2	K562	blood:
14	chr11:33517532..33520401-chr11:33525287..33527358,2	K562	blood:
15	chr11:33530740..33532522-chr11:33535502..33537304,2	MCF-7	breast:
16	chr11:33412811..33414591-chr11:33744029..33746622,2	K562	blood:
17	chr11:33517532..33520480-chr11:33524551..33527358,2	K562	blood:
18	chr11:33399022..33400859-chr11:33402110..33404984,2	K562	blood:
19	chr11:33366360..33368007-chr11:33376347..33377878,2	K562	blood:
20	chr11:33366273..33368343-chr11:33370196..33371959,2	K562	blood:
21	chr11:33365715..33367217-chr11:33368914..33370934,2	K562	blood:
22	chr11:33530740..33532522-chr11:33535502..33537304,2	MCF-7	breast:
23	chr11:32982327..32984023-chr11:33390393..33392493,2	K562	blood:
24	chr11:33392077..33394205-chr11:33397342..33400084,3	K562	blood:
25	chr11:33419522..33421501-chr11:33424149..33426108,2	K562	blood:
26	chr11:33422636..33425023-chr11:33427111..33429775,2	MCF-7	breast:
27	chr11:33495157..33498013-chr11:33505516..33507926,2	K562	blood:
28	chr11:33370166..33372800-chr11:33374328..33376444,2	MCF-7	breast:
29	chr11:33391648..33394205-chr11:33396367..33400084,3	K562	blood:
30	chr11:33392077..33394205-chr11:33397342..33400084,3	K562	blood:
31	chr11:33428202..33430119-chr11:33432481..33434506,2	MCF-7	breast:
32	chr11:33403805..33405903-chr11:33414463..33417062,2	MCF-7	breast:
33	chr11:33421417..33423758-chr11:33435787..33437817,2	K562	blood:
34	chr11:33432981..33435559-chr11:33436354..33439310,2	K562	blood:
35	chr11:33513897..33516124-chr11:33565308..33567092,2	K562	blood:
36	chr11:33475872..33478381-chr11:33480677..33482697,2	MCF-7	breast:
37	chr11:33391648..33394205-chr11:33396367..33400084,3	K562	blood:
38	chr11:33380757..33382861-chr11:33395684..33398398,2	MCF-7	breast:
39	chr11:33474719..33477394-chr11:33482084..33484055,2	K562	blood:
40	chr11:33530109..33532353-chr11:33535531..33537210,2	K562	blood:
41	chr11:33403805..33405903-chr11:33414463..33417062,2	MCF-7	breast:
42	chr11:33517532..33520401-chr11:33525287..33527358,2	K562	blood:
43	chr11:33399022..33400859-chr11:33402110..33404984,2	K562	blood:
44	chr11:33380757..33382861-chr11:33395684..33398398,2	MCF-7	breast:
45	chr11:33428202..33430119-chr11:33432481..33434506,2	MCF-7	breast:
46	chr11:33497434..33499618-chr11:33502949..33504703,2	K562	blood:
47	chr11:33518367..33520267-chr11:33520431..33522764,2	K562	blood:
48	chr11:33360349..33362095-chr11:33370787..33373728,2	MCF-7	breast:
49	chr11:33413545..33415997-chr11:33484077..33486158,2	K562	blood:
50	chr11:33433824..33436288-chr11:33439074..33441301,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HIPK3-2	chr11:33424762-33425151	NONHSAT018700
2	lnc-C11orf41-5	chr11:33472192-33472489	NONHSAT018701

No data

(count:13 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	HIPK3	hsa-miR-92a-3p	chr11:33375214-33375235
2	HIPK3	hsa-miR-20b-5p	chr11:33375245-33375267
3	HIPK3	hsa-miR-124-3p	chr11:33375376-33375395
4	HIPK3	hsa-miR-335-5p	chr11:33375589-33375614
5	HIPK3	hsa-miR-106a-5p	chr11:33375709-33375730
6	HIPK3	hsa-miR-106a-5p	chr11:33375245-33375267
7	HIPK3	hsa-miR-19b-3p	chr11:33375275-33375282
8	HIPK3	hsa-miR-124-3p	chr11:33375663-33375670
9	HIPK3	hsa-miR-92a-3p	chr11:33375228-33375234
10	HIPK3	hsa-miR-20b-5p	chr11:33375709-33375730
11	HIPK3	hsa-miR-19b-3p	chr11:33375260-33375282
12	HIPK3	hsa-miR-124-3p	chr11:33375651-33375670
13	HIPK3	hsa-miR-92a-3p	chr11:33375388-33375409

Variant related genes	Relation type
ENSG00000255207	TF binding region
ENSG00000254537	TF binding region
ENSG00000223134	TF binding region
ENSG00000255207	CpG island
ENSG00000254537	CpG island
ENSG00000223134	CpG island
ENSG00000255207	chromatin interactions
ENSG00000254537	chromatin interactions
ENSG00000085063	chromatin interactions
ENSG00000223134	chromatin interactions

Extended variants
information (count: 6486 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:6486 , 50 per page) page: 1 2 3 4 5 6 7 ... 130

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528014734	chr11:33368346-33368347	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs547657588	chr11:33368351-33368352	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs185548459	chr11:33368412-33368413	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs552259706	chr11:33368459-33368460	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs115410304	chr11:33368470-33368471	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs549103036	chr11:33368502-33368503	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs577809523	chr11:33368552-33368553	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs377269089	chr11:33368643-33368644	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs568829688	chr11:33368647-33368648	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs111969444	chr11:33368659-33368660	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs563889087	chr11:33368663-33368664	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs371326412	chr11:33368712-33368713	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs368444636	chr11:33368726-33368727	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs575699055	chr11:33368764-33368765	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs367944804	chr11:33368802-33368803	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs370795158	chr11:33368829-33368830	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs113570968	chr11:33368833-33368834	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs557816167	chr11:33368840-33368841	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs146687175	chr11:33368873-33368874	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs140297828	chr11:33368879-33368880	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs112993351	chr11:33368880-33368881	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs113037552	chr11:33368890-33368891	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs371306723	chr11:33368900-33368901	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs77834200	chr11:33368913-33368914	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs553683105	chr11:33368915-33368916	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs374207916	chr11:33368958-33368959	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs376474312	chr11:33368976-33368977	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs266466	chr11:33368992-33368993	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs371379296	chr11:33368995-33368996	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs184595801	chr11:33368999-33369000	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs562660003	chr11:33369020-33369021	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs576002296	chr11:33369060-33369061	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs188492569	chr11:33369092-33369093	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs565313577	chr11:33369113-33369114	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs527966232	chr11:33369114-33369115	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs150649867	chr11:33369127-33369128	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs374919719	chr11:33369168-33369169	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs367997325	chr11:33369176-33369177	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs372518927	chr11:33369188-33369189	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs199603859	chr11:33369221-33369222	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs181305871	chr11:33369229-33369230	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs549064154	chr11:33369279-33369280	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs200480487	chr11:33369337-33369338	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs368555140	chr11:33369376-33369377	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs200467770	chr11:33369382-33369383	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs184315270	chr11:33369393-33369394	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs551081820	chr11:33369420-33369421	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs189153633	chr11:33369432-33369433	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs55807239	chr11:33369439-33369440	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs138907505	chr11:33369445-33369446	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	22286061	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1638 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33320600-33369400	Weak transcription	Fetal Brain Male	brain
2	chr11:33342800-33370000	Weak transcription	Fetal Kidney	kidney
3	chr11:33342800-33376800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr11:33345800-33369000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr11:33346400-33368400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr11:33346400-33369400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr11:33349000-33368400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr11:33349600-33374600	Weak transcription	Brain Angular Gyrus	brain
9	chr11:33351400-33370200	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr11:33351400-33376600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr11:33353600-33369400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr11:33353800-33370200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr11:33354600-33374600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr11:33356600-33379000	Strong transcription	Monocytes-CD14+_RO01746	blood
15	chr11:33357800-33370000	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr11:33357800-33380000	Weak transcription	Psoas Muscle	Psoas
17	chr11:33358200-33368800	Weak transcription	Thymus	Thymus
18	chr11:33358200-33370200	Weak transcription	Fetal Heart	heart
19	chr11:33358200-33376000	Strong transcription	Primary T helper cells fromperipheralblood	blood
20	chr11:33358200-33376800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr11:33358800-33376000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr11:33358800-33379000	Strong transcription	Primary monocytes fromperipheralblood	blood
23	chr11:33359000-33377600	Strong transcription	Liver	Liver
24	chr11:33359400-33377200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
25	chr11:33359600-33376000	Strong transcription	Primary B cells from cord blood	blood
26	chr11:33359600-33376600	Strong transcription	Adipose Nuclei	Adipose
27	chr11:33359600-33377600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
28	chr11:33359600-33378600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr11:33359600-33379200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr11:33359800-33369400	Weak transcription	Brain Germinal Matrix	brain
31	chr11:33359800-33377200	Strong transcription	Primary neutrophils fromperipheralblood	blood
32	chr11:33360000-33379600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr11:33360200-33373200	Weak transcription	H9 Cell Line	embryonic stem cell
34	chr11:33360200-33376000	Strong transcription	Primary T helper cells PMA-I stimulated	--
35	chr11:33360200-33376600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr11:33360200-33377200	Strong transcription	Dnd41	blood
37	chr11:33360200-33378600	Strong transcription	Placenta	Placenta
38	chr11:33360200-33379000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr11:33360400-33374600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr11:33360800-33376000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
41	chr11:33360800-33377200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr11:33361200-33369000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr11:33362000-33369200	Weak transcription	Brain Inferior Temporal Lobe	brain
44	chr11:33362000-33371400	Weak transcription	Small Intestine	intestine
45	chr11:33362200-33368600	Weak transcription	Fetal Brain Female	brain
46	chr11:33362200-33369200	Weak transcription	Hela-S3	cervix
47	chr11:33363200-33369000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
48	chr11:33363200-33369200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
49	chr11:33363400-33369000	Weak transcription	Placenta Amnion	Placenta Amnion
50	chr11:33363400-33369200	Weak transcription	Brain Substantia Nigra	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links