Variant report

Variant	nsv832792
Chromosome Location	chr1:227211378-227364992
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:770)
CpG islands
(count:122)
Chromatin interactive
region (count:96)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

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No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:227282075-227282676	HepG2	liver:	n/a	n/a
2	ARID3A	chr1:227319080-227319280	K562	blood:	n/a	n/a
3	ARID3A	chr1:227361299-227361515	K562	blood:	n/a	n/a
4	ARID3A	chr1:227232193-227232430	K562	blood:	n/a	n/a
5	ARID3A	chr1:227358074-227358482	K562	blood:	n/a	n/a
6	ARID3A	chr1:227231537-227231737	K562	blood:	n/a	n/a
7	ARID3A	chr1:227258535-227258732	K562	blood:	n/a	n/a
8	ATF1	chr1:227258521-227258708	K562	blood:	n/a	n/a
9	ATF1	chr1:227357826-227358453	K562	blood:	n/a	n/a
10	ATF3	chr1:227258350-227258816	HCT-116	colon:	n/a	n/a
11	ATF3	chr1:227258443-227258716	K562	blood:	n/a	n/a
12	BACH1	chr1:227363300-227363678	K562	blood:	n/a	n/a
13	BACH1	chr1:227231445-227231759	K562	blood:	n/a	n/a
14	BACH1	chr1:227231455-227231670	H1-hESC	embryonic stem cell:	n/a	n/a
15	BATF	chr1:227260814-227261065	GM12878	blood:	n/a	n/a
16	BATF	chr1:227260782-227261061	GM12878	blood:	n/a	n/a
17	BATF	chr1:227315567-227315918	GM12878	blood:	n/a	n/a
18	BCL11A	chr1:227260773-227261059	GM12878	blood:	n/a	n/a
19	BHLHE40	chr1:227357092-227357408	K562	blood:	n/a	n/a
20	BRCA1	chr1:227319002-227319254	Hela-S3	cervix:	n/a	n/a
21	CBX3	chr1:227281849-227282721	HCT-116	colon:	n/a	n/a
22	CCNT2	chr1:227334421-227334611	K562	blood:	n/a	n/a
23	CCNT2	chr1:227358183-227358571	K562	blood:	n/a	n/a
24	CEBPB	chr1:227270310-227270472	K562	blood:	n/a	n/a
25	CEBPB	chr1:227230055-227230283	A549	lung:	n/a	n/a
26	CEBPB	chr1:227346577-227346829	MCF-7	breast:	n/a	n/a
27	CEBPB	chr1:227231385-227231813	IMR90	lung:	n/a	n/a
28	CEBPB	chr1:227230023-227230323	K562	blood:	n/a	n/a
29	CEBPB	chr1:227231524-227231767	A549	lung:	n/a	n/a
30	CEBPB	chr1:227338717-227338920	HepG2	liver:	n/a	chr1:227338774-227338785
31	CEBPB	chr1:227222245-227222399	A549	lung:	n/a	n/a
32	CEBPB	chr1:227258453-227258691	H1-hESC	embryonic stem cell:	n/a	chr1:227258577-227258588 chr1:227258576-227258587
33	CEBPB	chr1:227319032-227319072	K562	blood:	n/a	n/a
34	CEBPB	chr1:227258338-227258863	HCT-116	colon:	n/a	chr1:227258577-227258588 chr1:227258576-227258587
35	CEBPB	chr1:227231468-227231709	Hela-S3	cervix:	n/a	n/a
36	CEBPB	chr1:227346535-227346798	HepG2	liver:	n/a	n/a
37	CEBPB	chr1:227361781-227362125	IMR90	lung:	n/a	n/a
38	CEBPB	chr1:227338614-227338940	K562	blood:	n/a	chr1:227338774-227338785
39	CEBPB	chr1:227258398-227258770	K562	blood:	n/a	chr1:227258577-227258588 chr1:227258576-227258587
40	CEBPB	chr1:227258422-227258767	Hela-S3	cervix:	n/a	chr1:227258577-227258588 chr1:227258576-227258587
41	CEBPB	chr1:227336277-227336518	K562	blood:	n/a	n/a
42	CEBPB	chr1:227258420-227258694	K562	blood:	n/a	chr1:227258577-227258588 chr1:227258576-227258587
43	CEBPB	chr1:227322718-227323063	K562	blood:	n/a	n/a
44	CEBPB	chr1:227318964-227319214	Hela-S3	cervix:	n/a	n/a
45	CEBPB	chr1:227275642-227275884	K562	blood:	n/a	chr1:227275741-227275754 chr1:227275741-227275754
46	CEBPB	chr1:227258288-227258871	HCT-116	colon:	n/a	chr1:227258577-227258588 chr1:227258576-227258587
47	CEBPB	chr1:227260879-227261153	IMR90	lung:	n/a	n/a
48	CEBPB	chr1:227258415-227258755	IMR90	lung:	n/a	chr1:227258577-227258588 chr1:227258576-227258587
49	CEBPB	chr1:227211390-227211501	HepG2	liver:	n/a	n/a
50	CEBPB	chr1:227256353-227256415	H1-hESC	embryonic stem cell:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:227327429-227327479	AG09309	skin:	n/a
2	chr1:227260129-227260179	NT2-D1	testis:	n/a
3	chr1:227260129-227260179	K562	blood:	n/a
4	chr1:227260129-227260179	AoSMC	blood vessel:	n/a
5	chr1:227260129-227260179	MCF10A-Er-Src	breast:	n/a
6	chr1:227260129-227260179	SKMC	muscle:	n/a
7	chr1:227327429-227327479	Jurkat	blood:	n/a
8	chr1:227327429-227327479	HL-60	blood:	n/a
9	chr1:227260129-227260179	SK-N-SH	brain:	n/a
10	chr1:227260129-227260179	AG10803	skin:	n/a
11	chr1:227327429-227327479	HCPEpiC	choroid plexus:	n/a
12	chr1:227260129-227260179	HPAEpiC	pulmonary alveolar:	n/a
13	chr1:227260129-227260179	BJ	skin:	n/a
14	chr1:227327429-227327479	HMEC	breast:	n/a
15	chr1:227327429-227327479	AG09319	gingival:	n/a
16	chr1:227260129-227260179	HCPEpiC	choroid plexus:	n/a
17	chr1:227260129-227260179	HUVEC	blood vessel:	n/a
18	chr1:227260129-227260179	Caco-2	colon:	n/a
19	chr1:227327429-227327479	HUVEC	blood vessel:	n/a
20	chr1:227327429-227327479	HepG2	liver:	n/a
21	chr1:227327429-227327479	Hepatocyte	liver:	n/a
22	chr1:227327429-227327479	HRE	kidney:	n/a
23	chr1:227260129-227260179	AG09309	skin:	n/a
24	chr1:227327429-227327479	SK-N-SH	brain:	n/a
25	chr1:227327429-227327479	HEEpiC	esophagus:	n/a
26	chr1:227327429-227327479	GM06990	blood:	n/a
27	chr1:227327429-227327479	RPTEC	kidney:	n/a
28	chr1:227260129-227260179	HIPEpiC	eye:	n/a
29	chr1:227327429-227327479	HAEpiC	amniotic membrane:	n/a
30	chr1:227260129-227260179	SK-N-SH_RA	brain:	n/a
31	chr1:227260129-227260179	Jurkat	blood:	n/a
32	chr1:227327429-227327479	PFSK-1	brain:	n/a
33	chr1:227260129-227260179	HRCEpiC	kidney:	n/a
34	chr1:227327429-227327479	HRPEpiC	eye:	n/a
35	chr1:227327429-227327479	HRCEpiC	kidney:	n/a
36	chr1:227260129-227260179	H1-hESC	embryonic stem cell:	embryo
37	chr1:227327429-227327479	MCF-7	breast:	n/a
38	chr1:227327429-227327479	HEK293	kidney:	embryo
39	chr1:227327429-227327479	GM12891	blood:	n/a
40	chr1:227327429-227327479	NH-A	brain:	n/a
41	chr1:227327429-227327479	T-47D	breast:	n/a
42	chr1:227260129-227260179	NHBE	bronchial:	n/a
43	chr1:227327429-227327479	ovcar-3	ovarian:	n/a
44	chr1:227260129-227260179	GM06990	blood:	n/a
45	chr1:227260129-227260179	A549	lung:	n/a
46	chr1:227327429-227327479	NT2-D1	testis:	n/a
47	chr1:227260129-227260179	IMR90	lung:	fetal
48	chr1:227327429-227327479	AG04449	skin:	fetal
49	chr1:227260129-227260179	PFSK-1	brain:	n/a
50	chr1:227327429-227327479	GM12892	blood:	n/a

(count:96 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr1:227314492..227316043-chr1:227318628..227320566,2	K562	blood:
2	chr1:227317866..227320576-chr1:227321211..227323986,2	K562	blood:
3	chr1:227263840..227266585-chr1:227275633..227278048,3	K562	blood:
4	chr1:227259571..227263475-chr1:227264453..227268699,4	K562	blood:
5	chr1:227230140..227234774-chr1:227236431..227241922,5	K562	blood:
6	chr1:227100437..227100984-chr1:227264267..227265039,2	K562	blood:
7	chr1:227259676..227262107-chr1:227264453..227267335,2	K562	blood:
8	chr1:227246764..227248668-chr1:227249328..227251525,2	MCF-7	breast:
9	chr1:227319076..227321131-chr1:227322486..227324185,2	K562	blood:
10	chr1:227256237..227258373-chr1:227281662..227284397,2	K562	blood:
11	chr1:227100489..227101122-chr1:227314586..227315189,2	MCF-7	breast:
12	chr1:227248469..227250587-chr1:227251655..227253321,2	K562	blood:
13	chr1:227314587..227318154-chr1:227324311..227326852,3	MCF-7	breast:
14	chr1:227319076..227321131-chr1:227322486..227324185,2	K562	blood:
15	chr1:227319022..227319798-chr1:227635073..227635816,2	MCF-7	breast:
16	chr1:227314492..227316043-chr1:227318628..227320566,2	K562	blood:
17	chr1:227100305..227100846-chr1:227318760..227319399,2	MCF-7	breast:
18	chr1:227318905..227319442-chr1:227625175..227625871,2	MCF-7	breast:
19	chr1:227319066..227320904-chr1:227331310..227334061,2	K562	blood:
20	chr1:227322546..227324104-chr1:227325475..227327194,2	K562	blood:
21	chr1:227224836..227227359-chr1:227231406..227233044,2	K562	blood:
22	chr1:227322546..227324104-chr1:227325475..227327194,2	K562	blood:
23	chr1:227267691..227268598-chr5:174748538..174749384,2	MCF-7	breast:
24	chr1:227259571..227263475-chr1:227264453..227268699,4	K562	blood:
25	chr1:227356009..227359900-chr1:227368469..227370220,4	K562	blood:
26	chr1:227263840..227266585-chr1:227275633..227278048,3	K562	blood:
27	chr1:227247700..227249846-chr1:227255373..227257295,2	K562	blood:
28	chr1:227125600..227128392-chr1:227333735..227336576,2	MCF-7	breast:
29	chr1:227127569..227129155-chr1:227257063..227258978,2	MCF-7	breast:
30	chr1:227204938..227208966-chr1:227211408..227214932,3	K562	blood:
31	chr1:227327253..227330264-chr1:227332146..227336856,4	K562	blood:
32	chr1:227258899..227260884-chr1:227261569..227263920,2	K562	blood:
33	chr1:227247700..227249846-chr1:227255373..227257295,2	K562	blood:
34	chr1:227231949..227233855-chr1:227255369..227258277,2	K562	blood:
35	chr1:227270688..227272597-chr1:227288564..227290914,2	MCF-7	breast:
36	chr1:227327253..227330264-chr1:227332146..227336856,4	K562	blood:
37	chr1:227256237..227258373-chr1:227281662..227284397,2	K562	blood:
38	chr1:227210940..227212945-chr1:227215048..227216859,2	K562	blood:
39	chr1:227312511..227315121-chr1:227315946..227317817,2	K562	blood:
40	chr1:227319086..227319624-chr1:227625143..227626016,2	K562	blood:
41	chr1:227236590..227238961-chr1:227241573..227243242,3	K562	blood:
42	chr1:227274632..227277428-chr1:227279390..227281436,2	K562	blood:
43	chr1:227242900..227245161-chr1:227250146..227252441,3	K562	blood:
44	chr1:227243831..227246541-chr1:227247776..227250757,2	K562	blood:
45	chr1:227224836..227227359-chr1:227231406..227233044,2	K562	blood:
46	chr1:227357663..227359363-chr1:227504376..227506174,2	K562	blood:
47	chr1:227323669..227325656-chr1:227329676..227331291,2	K562	blood:
48	chr1:227248469..227250587-chr1:227251655..227253321,2	K562	blood:
49	chr1:227219115..227221995-chr1:227227439..227229511,2	K562	blood:
50	chr1:227242900..227245161-chr1:227250146..227252441,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ITPKB-3	chr1:227295185-227295658	NONHSAT009914
2	lnc-ITPKB-3	chr1:227297151-227297275	NONHSAT009914
3	lnc-ADCK3-5	chr1:227237319-227238751	NONHSAT009913

No data

Variant related genes	Relation type
ENSG00000228625	TF binding region
CDC42BPA	TF binding region
ENSG00000228625	CpG island
CDC42BPA	CpG island
ENSG00000228625	chromatin interactions
ENSG00000163050	chromatin interactions
ENSG00000081692	chromatin interactions
ENSG00000143776	chromatin interactions
ENSG00000143740	chromatin interactions

Extended variants
information (count: 5788 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:5788 , 50 per page) page: 1 2 3 4 5 6 7 ... 116

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs531309493	chr1:227211379-227211380	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs533319824	chr1:227211437-227211438	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs549859641	chr1:227211461-227211462	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs569488111	chr1:227211469-227211470	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs7526725	chr1:227211506-227211507	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs112662153	chr1:227211606-227211607	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs567087787	chr1:227211620-227211621	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs534497524	chr1:227211698-227211699	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs386639932	chr1:227211708-227211709	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs190375764	chr1:227211710-227211711	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs182254562	chr1:227211725-227211726	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs186964074	chr1:227211782-227211783	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs78436343	chr1:227211873-227211874	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs34766032	chr1:227211928-227211929	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs533182939	chr1:227211934-227211935	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs373894383	chr1:227211935-227211936	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs374744512	chr1:227211969-227211970	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs146838508	chr1:227212005-227212006	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs10916077	chr1:227212024-227212025	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs149063316	chr1:227212069-227212070	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs572295297	chr1:227212073-227212074	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs542858896	chr1:227212092-227212093	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs111418931	chr1:227212135-227212136	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs66602251	chr1:227212136-227212137	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs543564282	chr1:227212159-227212160	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs565002209	chr1:227212254-227212255	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs185390560	chr1:227212268-227212269	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs552046004	chr1:227212284-227212285	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs374057370	chr1:227212299-227212300	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs567052188	chr1:227212329-227212330	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs527983314	chr1:227212342-227212343	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs549613842	chr1:227212343-227212344	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs531539704	chr1:227212351-227212352	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs551140928	chr1:227212354-227212355	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs6426560	chr1:227212366-227212367	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs533508644	chr1:227212369-227212370	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs73089703	chr1:227212377-227212378	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs556119936	chr1:227212441-227212442	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs571444650	chr1:227212442-227212443	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs189154849	chr1:227212456-227212457	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs61834038	chr1:227212516-227212517	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs376701188	chr1:227212532-227212533	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs367639084	chr1:227212572-227212573	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs572164190	chr1:227212573-227212574	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs542571283	chr1:227212577-227212578	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs192864491	chr1:227212578-227212579	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs4653782	chr1:227212601-227212602	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs543478552	chr1:227212603-227212604	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs564865224	chr1:227212605-227212606	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs4653476	chr1:227212669-227212670	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:93)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Mental retardation	19951919	CNVD
Non-syndromic sensorineural hearing loss	17873649	CNVD
Basal cell lymphoma	17053054	CNVD
Autism	14699429	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Fumarase deficiency	21572526	CNVD
Autism	17483303	CNVD
Kartagener syndrome	16639409	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
Myelofibrosis	22110671	CNVD
abnormal development	18461090	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:2342 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:227154400-227294200	Weak transcription	Hela-S3	cervix
2	chr1:227175600-227216200	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr1:227176000-227216400	Weak transcription	NHLF	lung
4	chr1:227177400-227255200	Weak transcription	Small Intestine	intestine
5	chr1:227178400-227271200	Weak transcription	Psoas Muscle	Psoas
6	chr1:227178600-227226200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr1:227179400-227215000	Weak transcription	Placenta	Placenta
8	chr1:227179600-227213800	Weak transcription	NH-A	brain
9	chr1:227182000-227216000	Weak transcription	Colon Smooth Muscle	Colon
10	chr1:227182800-227224200	Weak transcription	Spleen	Spleen
11	chr1:227183200-227228200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr1:227183200-227240400	Weak transcription	Colonic Mucosa	Colon
13	chr1:227184000-227214600	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr1:227184000-227234000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr1:227187200-227218600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
16	chr1:227190600-227217000	Weak transcription	Esophagus	oesophagus
17	chr1:227190600-227223200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr1:227190600-227272600	Weak transcription	Lung	lung
19	chr1:227191200-227214400	Weak transcription	Aorta	Aorta
20	chr1:227192600-227220200	Weak transcription	Rectal Smooth Muscle	rectum
21	chr1:227192800-227214200	Weak transcription	Right Ventricle	heart
22	chr1:227192800-227220200	Weak transcription	Gastric	stomach
23	chr1:227202600-227217200	Strong transcription	Adipose Nuclei	Adipose
24	chr1:227202600-227222600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr1:227203000-227278800	Weak transcription	Pancreas	Pancrea
26	chr1:227204800-227214400	Weak transcription	Brain Substantia Nigra	brain
27	chr1:227205400-227216400	Weak transcription	HepG2	liver
28	chr1:227205600-227220400	Weak transcription	Stomach Mucosa	stomach
29	chr1:227206600-227212800	Strong transcription	K562	blood
30	chr1:227206600-227214400	Weak transcription	Brain Angular Gyrus	brain
31	chr1:227207400-227213800	Weak transcription	Brain Cingulate Gyrus	brain
32	chr1:227207600-227242000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr1:227208200-227216200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
34	chr1:227208600-227216200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr1:227208800-227216200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr1:227208800-227222600	Strong transcription	Cortex derived primary cultured neurospheres	brain
37	chr1:227209000-227213400	Weak transcription	HUES48 Cell Line	embryonic stem cell
38	chr1:227209000-227214000	Weak transcription	Brain Hippocampus Middle	brain
39	chr1:227209000-227214200	Weak transcription	Brain Germinal Matrix	brain
40	chr1:227209000-227214200	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr1:227209000-227214200	Weak transcription	Fetal Heart	heart
42	chr1:227209000-227214200	Weak transcription	Stomach Smooth Muscle	stomach
43	chr1:227209000-227214400	Weak transcription	Brain Anterior Caudate	brain
44	chr1:227209000-227215400	Weak transcription	Muscle Satellite Cultured Cells	--
45	chr1:227209000-227215800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
46	chr1:227209000-227216200	Weak transcription	HSMM	muscle
47	chr1:227209000-227231000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr1:227209000-227234600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr1:227209000-227272400	Weak transcription	Fetal Intestine Small	intestine
50	chr1:227209200-227212600	Weak transcription	Fetal Muscle Leg	muscle

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