Variant report

Variant	nsv832845
Chromosome Location	chr14:84726378-84900199
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:6)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:84876329..84877076-chr17:8942754..8943503,2	MCF-7	breast:
2	chr14:84843657..84844191-chr5:72572440..72573200,2	MCF-7	breast:
3	chr14:84751809..84754653-chr14:84755331..84758306,2	MCF-7	breast:
4	chr14:84751809..84754653-chr14:84755331..84758306,2	MCF-7	breast:
5	chr14:84796952..84798604-chr14:84802192..84805102,2	K562	blood:
6	chr14:84796952..84798604-chr14:84802192..84805102,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SEL1L-10	chr14:84765265-84765469	XLOC_011092
2	lnc-SEL1L-10	chr14:84761936-84761961	XLOC_011092

No data

Extended variants
information (count: 3197 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:3197 , 50 per page) page: 1 2 3 4 5 6 7 ... 64

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs147836165	chr14:84726412-84726413	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs553193158	chr14:84726422-84726423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs141205807	chr14:84726445-84726446	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs113130217	chr14:84726521-84726522	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs557129910	chr14:84726523-84726524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs575560268	chr14:84726545-84726546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs115963843	chr14:84726605-84726606	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs558395070	chr14:84726643-84726644	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs184668519	chr14:84726703-84726704	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs533701859	chr14:84726729-84726730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs540187005	chr14:84726752-84726753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs577168763	chr14:84726808-84726809	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs561674077	chr14:84726846-84726847	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs542774748	chr14:84726926-84726927	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs373395473	chr14:84726930-84726931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs189078709	chr14:84727000-84727001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs562985695	chr14:84727026-84727027	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs528980604	chr14:84727094-84727095	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs544450432	chr14:84727099-84727100	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs368316971	chr14:84727111-84727112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs533128698	chr14:84727161-84727162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs146966010	chr14:84727182-84727183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs560346701	chr14:84727231-84727232	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs528483867	chr14:84727293-84727294	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs566864825	chr14:84727314-84727315	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs12587226	chr14:84727315-84727316	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs374597327	chr14:84727325-84727326	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs192076657	chr14:84727378-84727379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs184170365	chr14:84727416-84727417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs550795963	chr14:84727480-84727481	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs569122622	chr14:84727487-84727488	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs559319667	chr14:84727502-84727503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs539599065	chr14:84727509-84727510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs558177609	chr14:84727510-84727511	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs573473364	chr14:84727518-84727519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs112130831	chr14:84727521-84727522	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs9323743	chr14:84727524-84727525	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs570567255	chr14:84727525-84727526	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs544341770	chr14:84727546-84727547	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs562543003	chr14:84727624-84727625	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs577913058	chr14:84727627-84727628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs201871213	chr14:84727654-84727655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs74749108	chr14:84727655-84727656	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs77510020	chr14:84727664-84727665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs66870872	chr14:84727665-84727666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs545145930	chr14:84727720-84727721	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs560225689	chr14:84727741-84727742	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs532473106	chr14:84727743-84727744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs189351981	chr14:84727756-84727757	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs546706075	chr14:84727833-84727834	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16774939	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Neuroblastoma	18923191	CNVD
Barrett''s syndrome	19417022	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	17053054	CNVD
cataract	16735990	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16608533	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
Breast cancer	17603634	CNVD
Glioblastoma	21080181	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	20164920	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	22522925	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD

Chromatin state (count:159 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84720800-84732200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:84723200-84728000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr14:84728000-84728400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr14:84734800-84735200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:84738200-84740000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr14:84738600-84739000	Enhancers	Fetal Lung	lung
7	chr14:84738600-84739200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr14:84738600-84739200	Enhancers	Adipose Nuclei	Adipose
9	chr14:84738600-84739800	Enhancers	Hela-S3	cervix
10	chr14:84738600-84741200	Enhancers	Ovary	ovary
11	chr14:84739200-84740000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr14:84739600-84740200	Enhancers	HUVEC	blood vessel
13	chr14:84740000-84741000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr14:84740800-84741400	Enhancers	Duodenum Smooth Muscle	Duodenum
15	chr14:84741000-84741200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr14:84742800-84743000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr14:84750200-84750600	Enhancers	Adipose Nuclei	Adipose
18	chr14:84750600-84751600	Weak transcription	Adipose Nuclei	Adipose
19	chr14:84751600-84752400	Enhancers	Adipose Nuclei	Adipose
20	chr14:84752400-84758800	Weak transcription	Adipose Nuclei	Adipose
21	chr14:84757200-84757400	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr14:84758800-84759600	Enhancers	Adipose Nuclei	Adipose
23	chr14:84759600-84765000	Weak transcription	Adipose Nuclei	Adipose
24	chr14:84762400-84762800	Active TSS	Sigmoid Colon	Sigmoid Colon
25	chr14:84764600-84765400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr14:84764600-84766000	Enhancers	Placenta Amnion	Placenta Amnion
27	chr14:84764800-84765200	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr14:84765000-84765400	Flanking Active TSS	Adipose Nuclei	Adipose
29	chr14:84765000-84766200	Enhancers	Fetal Lung	lung
30	chr14:84765200-84766000	Enhancers	Esophagus	oesophagus
31	chr14:84765200-84766000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
32	chr14:84765200-84766000	Enhancers	Fetal Stomach	stomach
33	chr14:84765200-84766000	Enhancers	Stomach Mucosa	stomach
34	chr14:84765400-84766000	Enhancers	Adipose Nuclei	Adipose
35	chr14:84765400-84769600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr14:84766000-84768400	Weak transcription	Adipose Nuclei	Adipose
37	chr14:84766000-84769000	Weak transcription	Esophagus	oesophagus
38	chr14:84768200-84768600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr14:84768200-84768800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr14:84768400-84768600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr14:84768400-84768600	Enhancers	Adipose Nuclei	Adipose
42	chr14:84768600-84769000	Weak transcription	Adipose Nuclei	Adipose
43	chr14:84768600-84770600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr14:84769000-84769800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
45	chr14:84769000-84769800	ZNF genes & repeats	Esophagus	oesophagus
46	chr14:84769200-84769800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr14:84769600-84769800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr14:84769800-84772600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
49	chr14:84775800-84776200	Enhancers	Pancreatic Islets	Pancreatic Islet
50	chr14:84776200-84778400	Weak transcription	Pancreatic Islets	Pancreatic Islet

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