Variant report

Variant	nsv833210
Chromosome Location	chr16:34013099-34020334
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 835 )
Associated
traits (count: 119 )

Variant overlapped rSNPs/rCNVs (count:835 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs557130471	chr16:34013100-34013101	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs150677566	chr16:34013101-34013102	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs568839495	chr16:34013108-34013109	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs536244923	chr16:34013120-34013121	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs77121584	chr16:34013131-34013132	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs76448744	chr16:34013141-34013142	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs554524880	chr16:34013155-34013156	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs1817718	chr16:34013158-34013159	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs80261887	chr16:34013161-34013162	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs77326084	chr16:34013163-34013164	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs573081362	chr16:34013172-34013173	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs72480087	chr16:34013173-34013174	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs76773273	chr16:34013174-34013175	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs201059720	chr16:34013177-34013178	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs79532010	chr16:34013179-34013180	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs36137531	chr16:34013180-34013181	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs36129882	chr16:34013185-34013186	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs546607578	chr16:34013186-34013187	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs75185767	chr16:34013188-34013189	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs80247063	chr16:34013190-34013191	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs77588886	chr16:34013191-34013192	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs79455047	chr16:34013192-34013193	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs79797450	chr16:34013194-34013195	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs78366302	chr16:34013197-34013198	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs75796047	chr16:34013204-34013205	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs75779366	chr16:34013206-34013207	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs74962035	chr16:34013207-34013208	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs75868465	chr16:34013209-34013210	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs540207473	chr16:34013213-34013214	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs558307798	chr16:34013214-34013215	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs2675850	chr16:34013215-34013216	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs75031184	chr16:34013222-34013223	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs75965273	chr16:34013223-34013224	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs77675512	chr16:34013225-34013226	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs202170544	chr16:34013231-34013232	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs75757063	chr16:34013232-34013233	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs77074333	chr16:34013233-34013234	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs78956302	chr16:34013235-34013236	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs74950820	chr16:34013236-34013237	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs77007757	chr16:34013237-34013238	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs80120685	chr16:34013238-34013239	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs78801945	chr16:34013239-34013240	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs78854785	chr16:34013240-34013241	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs80274402	chr16:34013241-34013242	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs79415475	chr16:34013242-34013243	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs78952054	chr16:34013243-34013244	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs75223476	chr16:34013244-34013245	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs9673382	chr16:34013245-34013246	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs78984958	chr16:34013246-34013247	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs75479193	chr16:34013248-34013249	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:119)

Disease	PMID	Source
Hodgkin''s lymphoma	20651079	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	18172304	CNVD
Breast cancer	16608533	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Autism	22566537	CNVD
Intellectual disability	22566537	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Ductal carcinoma	22052326	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Mental retardation	19951919	CNVD
Colorectal cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Myelofibrosis	22110671	CNVD
Epilepsy	22499536	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Austim spectrum disorder	21302340	CNVD
Autism	22513405	CNVD
Autism	22958593	CNVD
Autism	18184952	CNVD
Autism	19966786	CNVD
Autism	21394203	CNVD
Autism	21969575	CNVD
Autism	22241247	CNVD
Autism	20970697	CNVD
Autism	20942916	CNVD
Epilepsy	20970697	CNVD
Intellectual disability	22045946	CNVD
Mental retardation	19966786	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Autism	18923514	CNVD
Obesity	21881559	CNVD
Obesity	21956041	CNVD
Autism	20659124	CNVD
Mental retardation	21062444	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	22885689	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	20970697	CNVD
Schizophrenia	20433910	CNVD
Schizophrenia	22241247	CNVD
Autism	19242545	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Intracranial ependymoma	16609018	CNVD
Schizophrenia	21399695	CNVD
Autism	21956041	CNVD
Disorders of sex development	21048976	CNVD
Autism	22067053	CNVD
Autism	18156158	CNVD
Mental retardation	20152051	CNVD
Autism	19218893	CNVD
Autism	21289514	CNVD
Schizophrenia	19855392	CNVD
neurodevelopmental Syndrome	20503337	CNVD
Benign familial neonatal-infantile seizures	21060786	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Cancer	21183584	CNVD
Low-grade fibromyxoid sarcoma	21536545	CNVD
Breast cancer	21045282	CNVD
Neuroblastoma	20406844	CNVD
Autism	19050728	CNVD
Epilepsy	20923578	CNVD
Psychiatric disorder	19050728	CNVD
Schizophrenia	19348701	CNVD
Attention deficit hyperactivity disorder	19097825	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Breast cancer	20409316	CNVD
Severe combined immunodeficiency	19097825	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Autism	18522746	CNVD
Wilms tumour	21544195	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	22297974	CNVD
Breast cancer	21364760	CNVD
Renal cell carcinoma	18194544	CNVD

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:34004000-34016600	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
2	chr16:34004000-34016800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr16:34004200-34016800	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
4	chr16:34012600-34014600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
5	chr16:34014200-34016600	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
6	chr16:34015600-34015800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
7	chr16:34015800-34016800	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr16:34016800-34021200	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr16:34016800-34021400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr16:34016800-34021400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr16:34019800-34021400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr16:34020000-34020200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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