Variant report

Variant	nsv834700
Chromosome Location	chr3:54637374-54803896
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:54730389-54730653	HepG2	liver:	n/a	n/a
2	ATF2	chr3:54666267-54667360	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr3:54675200-54675922	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr3:54663698-54665005	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr3:54665071-54668509	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr3:54665419-54665996	H1-hESC	embryonic stem cell:	n/a	n/a
7	BCL3	chr3:54751395-54751958	GM12878	blood:	n/a	n/a
8	BCL3	chr3:54751402-54752088	GM12878	blood:	n/a	n/a
9	BRCA1	chr3:54663865-54664797	H1-hESC	embryonic stem cell:	n/a	n/a
10	CEBPB	chr3:54705569-54705888	H1-hESC	embryonic stem cell:	n/a	chr3:54705720-54705733 chr3:54705720-54705731 chr3:54705720-54705733 chr3:54705721-54705732 chr3:54705720-54705731 chr3:54705720-54705733
11	CEBPB	chr3:54674807-54675436	H1-hESC	embryonic stem cell:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
12	CEBPB	chr3:54674822-54675157	HepG2	liver:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
13	CEBPB	chr3:54705617-54705868	K562	blood:	n/a	chr3:54705720-54705733 chr3:54705720-54705731 chr3:54705720-54705733 chr3:54705721-54705732 chr3:54705720-54705731 chr3:54705720-54705733
14	CEBPB	chr3:54686680-54687055	K562	blood:	n/a	n/a
15	CEBPB	chr3:54686689-54687044	IMR90	lung:	n/a	n/a
16	CEBPB	chr3:54663262-54663342	Hela-S3	cervix:	n/a	n/a
17	CEBPB	chr3:54715637-54715919	K562	blood:	n/a	chr3:54715761-54715772
18	CEBPB	chr3:54747802-54748113	IMR90	lung:	n/a	chr3:54747910-54747923 chr3:54747910-54747923 chr3:54747910-54747921
19	CEBPB	chr3:54749632-54749903	HepG2	liver:	n/a	chr3:54749748-54749759
20	CEBPB	chr3:54715599-54715947	H1-hESC	embryonic stem cell:	n/a	chr3:54715761-54715772
21	CEBPB	chr3:54674829-54675153	K562	blood:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
22	CEBPB	chr3:54715576-54715898	HepG2	liver:	n/a	chr3:54715761-54715772
23	CEBPB	chr3:54658734-54658901	HepG2	liver:	n/a	n/a
24	CEBPB	chr3:54686688-54687024	Hela-S3	cervix:	n/a	n/a
25	CEBPB	chr3:54642650-54642901	HepG2	liver:	n/a	chr3:54642772-54642785
26	CEBPB	chr3:54674321-54674582	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr3:54715657-54715884	IMR90	lung:	n/a	chr3:54715761-54715772
28	CEBPB	chr3:54747799-54748096	HepG2	liver:	n/a	chr3:54747910-54747923 chr3:54747910-54747923 chr3:54747910-54747921
29	CEBPB	chr3:54705566-54705850	Hela-S3	cervix:	n/a	chr3:54705720-54705733 chr3:54705720-54705731 chr3:54705720-54705733 chr3:54705721-54705732 chr3:54705720-54705731 chr3:54705720-54705733
30	CEBPB	chr3:54715668-54715902	Hela-S3	cervix:	n/a	chr3:54715761-54715772
31	CEBPB	chr3:54662772-54662821	K562	blood:	n/a	n/a
32	CEBPB	chr3:54749772-54749776	Hela-S3	cervix:	n/a	n/a
33	CEBPB	chr3:54749593-54749836	A549	lung:	n/a	chr3:54749748-54749759
34	CEBPB	chr3:54686689-54687038	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr3:54662696-54662937	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr3:54749627-54749896	IMR90	lung:	n/a	chr3:54749748-54749759
37	CEBPB	chr3:54751012-54751179	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr3:54686692-54687032	A549	lung:	n/a	n/a
39	CEBPB	chr3:54789721-54790829	IMR90	lung:	n/a	n/a
40	CEBPB	chr3:54674840-54675118	Hela-S3	cervix:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
41	CEBPB	chr3:54674830-54675164	IMR90	lung:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
42	CEBPB	chr3:54730351-54730570	HepG2	liver:	n/a	n/a
43	CEBPB	chr3:54670526-54670717	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr3:54686758-54687043	HepG2	liver:	n/a	n/a
45	CEBPB	chr3:54715677-54715850	A549	lung:	n/a	chr3:54715761-54715772
46	CEBPB	chr3:54776813-54776867	K562	blood:	n/a	n/a
47	CEBPB	chr3:54705574-54705881	HepG2	liver:	n/a	chr3:54705720-54705733 chr3:54705720-54705731 chr3:54705720-54705733 chr3:54705721-54705732 chr3:54705720-54705731 chr3:54705720-54705733
48	CEBPB	chr3:54674809-54675161	A549	lung:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
49	CHD1	chr3:54671060-54671405	H1-hESC	embryonic stem cell:	n/a	n/a
50	CHD1	chr3:54672894-54673119	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:54673387-54673437	Hepatocyte	liver:	n/a
2	chr3:54673387-54673437	Hepatocyte	liver:	n/a
3	chr3:54659987-54660037	HEEpiC	esophagus:	n/a
4	chr3:54666934-54666984	GM19239	blood:	n/a
5	chr3:54656965-54657015	PANC-1	pancreas:	n/a
6	chr3:54666934-54666984	HMEC	breast:	n/a
7	chr3:54656965-54657015	IMR90	lung:	fetal
8	chr3:54660438-54660488	SK-N-SH	brain:	n/a
9	chr3:54660438-54660488	K562	blood:	n/a
10	chr3:54666934-54666984	H1-hESC	embryonic stem cell:	embryo
11	chr3:54660332-54660382	HNPCEpiC	eye:	n/a
12	chr3:54673387-54673437	Jurkat	blood:	n/a
13	chr3:54666934-54666984	NT2-D1	testis:	n/a
14	chr3:54673387-54673437	NT2-D1	testis:	n/a
15	chr3:54674405-54674455	NH-A	brain:	n/a
16	chr3:54674847-54674897	AG04449	skin:	fetal
17	chr3:54737888-54737938	AG09319	gingival:	n/a
18	chr3:54737888-54737938	U87	brain:	n/a
19	chr3:54737888-54737938	SKMC	muscle:	n/a
20	chr3:54656965-54657015	SK-N-SH	brain:	n/a
21	chr3:54790638-54790688	AG09309	skin:	n/a
22	chr3:54666934-54666984	HL-60	blood:	n/a
23	chr3:54674847-54674897	ProgFib	skin:	n/a
24	chr3:54674847-54674897	HCT-116	colon:	n/a
25	chr3:54660332-54660382	GM12892	blood:	n/a
26	chr3:54673387-54673437	ECC-1	luminal epithelium:	n/a
27	chr3:54666934-54666984	GM12878	blood:	n/a
28	chr3:54663570-54663620	Hela-S3	cervix:	n/a
29	chr3:54666934-54666984	GM12892	blood:	n/a
30	chr3:54674847-54674897	GM06990	blood:	n/a
31	chr3:54663570-54663620	U87	brain:	n/a
32	chr3:54700753-54700803	HEEpiC	esophagus:	n/a
33	chr3:54674405-54674455	SK-N-SH_RA	brain:	n/a
34	chr3:54790638-54790688	AG09319	gingival:	n/a
35	chr3:54660934-54660984	AG10803	skin:	n/a
36	chr3:54790638-54790688	NT2-D1	testis:	n/a
37	chr3:54660532-54660582	H1-hESC	embryonic stem cell:	embryo
38	chr3:54660332-54660382	HRPEpiC	eye:	n/a
39	chr3:54660532-54660582	ovcar-3	ovarian:	n/a
40	chr3:54737888-54737938	NH-A	brain:	n/a
41	chr3:54656965-54657015	HUVEC	blood vessel:	n/a
42	chr3:54700753-54700803	Hela-S3	cervix:	n/a
43	chr3:54700753-54700803	NB4	blood:	n/a
44	chr3:54674847-54674897	Caco-2	colon:	n/a
45	chr3:54674847-54674897	HEK293	kidney:	embryo
46	chr3:54660934-54660984	NH-A	brain:	n/a
47	chr3:54663570-54663620	H1-hESC	embryonic stem cell:	embryo
48	chr3:54700753-54700803	HCF	heart:	n/a
49	chr3:54660532-54660582	HAEpiC	amniotic membrane:	n/a
50	chr3:54737888-54737938	HRCEpiC	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:54736841..54738842-chr3:54744528..54747366,2	K562	blood:
2	chr3:54738031..54740045-chr3:54741949..54744426,2	K562	blood:
3	chr3:54775529..54778443-chr3:54782787..54785750,2	K562	blood:
4	chr3:54657347..54660339-chr3:54665865..54667406,2	MCF-7	breast:
5	chr3:54738031..54740045-chr3:54741949..54744426,2	K562	blood:
6	chr3:54775529..54778443-chr3:54782787..54785750,2	K562	blood:
7	chr3:54736841..54738842-chr3:54744528..54747366,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LRTM1-5	chr3:54642626-54642807	ucscGeneNc_uc003dhj_2
2	lnc-LRTM1-4	chr3:54657638-54657666	NONHSAT090014
3	lnc-LRTM1-4	chr3:54649137-54649163	NONHSAT090014
4	lnc-LRTM1-5	chr3:54646758-54648924	ucscGeneNc_uc003dhj_2
5	lnc-LRTM1-5	chr3:54643528-54643632	ucscGeneNc_uc003dhj_2
6	lnc-LRTM1-5	chr3:54641193-54641874	ucscGeneNc_uc003dhj_2
7	lnc-LRTM1-3	chr3:54666151-54666883	NONHSAT090017
8	lnc-LRTM1-4	chr3:54657178-54657484	NONHSAT090014

Variant related genes	Relation type
ESRG	TF binding region
RPS15P5	TF binding region
ESRG	CpG island
RPS15P5	CpG island
ENSG00000229806	chromatin interactions

Extended variants
information (count: 6093 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:6093 , 50 per page) page: 1 2 3 4 5 6 7 ... 122

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376605756	chr3:54637405-54637406	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs559056738	chr3:54637413-54637414	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs542512219	chr3:54637421-54637422	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs181633623	chr3:54637480-54637481	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs532902163	chr3:54637484-54637485	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs186713401	chr3:54637492-54637493	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs560882008	chr3:54637513-54637514	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs192496722	chr3:54637536-54637537	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs138081908	chr3:54637563-54637564	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs531562128	chr3:54637585-54637586	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs547847405	chr3:54641222-54641223	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs185076288	chr3:54641248-54641249	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs529767540	chr3:54641254-54641255	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs549464954	chr3:54641266-54641267	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs569958670	chr3:54641294-54641295	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs191544219	chr3:54641296-54641297	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs552449935	chr3:54641298-54641299	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs586391	chr3:54641341-54641342	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs534969514	chr3:54641348-54641349	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs555034473	chr3:54641370-54641371	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
21	rs568442054	chr3:54641375-54641376	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
22	rs537588885	chr3:54641380-54641381	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
23	rs182929019	chr3:54641420-54641421	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
24	rs11714443	chr3:54641423-54641424	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
25	rs545211415	chr3:54641437-54641438	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
26	rs558434611	chr3:54641438-54641439	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
27	rs577676792	chr3:54641449-54641450	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs188712680	chr3:54641459-54641460	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
29	rs560599521	chr3:54641463-54641464	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs192843071	chr3:54641464-54641465	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs73844111	chr3:54641473-54641474	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs563049460	chr3:54641478-54641479	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
33	rs532079669	chr3:54641511-54641512	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
34	rs552751374	chr3:54641512-54641513	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
35	rs2884808	chr3:54641568-54641569	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs201932503	chr3:54641571-54641572	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
37	rs540948922	chr3:54641599-54641600	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
38	rs184053771	chr3:54641618-54641619	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
39	rs568507439	chr3:54641619-54641620	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
40	rs537450041	chr3:54641648-54641649	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
41	rs534988321	chr3:54641656-54641657	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs140762904	chr3:54641678-54641679	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs570940496	chr3:54641686-54641687	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
44	rs553223278	chr3:54641710-54641711	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
45	rs62255498	chr3:54641736-54641737	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs199545544	chr3:54641772-54641773	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
47	rs187713582	chr3:54641780-54641781	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
48	rs545924531	chr3:54642620-54642621	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs568645962	chr3:54642630-54642631	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
50	rs60029402	chr3:54642631-54642632	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Acute myeloid leukemia	20729466	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Renal cell carcinoma	18765545	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Breast cancer	19490591	CNVD
Autism	18414403	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-small cell lung cancer	20864512	CNVD
Metastatic melanoma	17975146	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:986 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:54637400-54637600	Enhancers	Fetal Muscle Leg	muscle
2	chr3:54642600-54642800	Weak transcription	Psoas Muscle	Psoas
3	chr3:54642600-54643400	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr3:54642800-54643000	Enhancers	Psoas Muscle	Psoas
5	chr3:54642800-54643200	Enhancers	Right Atrium	heart
6	chr3:54642800-54643200	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr3:54643000-54644600	Weak transcription	Psoas Muscle	Psoas
8	chr3:54646800-54655200	Weak transcription	Brain Angular Gyrus	brain
9	chr3:54650200-54650400	Enhancers	Fetal Muscle Trunk	muscle
10	chr3:54650400-54654600	Weak transcription	Fetal Muscle Trunk	muscle
11	chr3:54651000-54666400	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr3:54652800-54665000	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr3:54653600-54653800	Enhancers	HSMM	muscle
14	chr3:54653800-54654000	Enhancers	Fetal Muscle Leg	muscle
15	chr3:54653800-54654800	Weak transcription	HSMM	muscle
16	chr3:54654000-54655000	Weak transcription	Fetal Muscle Leg	muscle
17	chr3:54654000-54667000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr3:54654400-54656400	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr3:54654600-54655800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr3:54654600-54655800	Enhancers	Fetal Muscle Trunk	muscle
21	chr3:54654800-54655000	Enhancers	Stomach Smooth Muscle	stomach
22	chr3:54654800-54656200	Enhancers	HMEC	breast
23	chr3:54654800-54656200	Enhancers	HSMM	muscle
24	chr3:54654800-54662400	Weak transcription	Right Atrium	heart
25	chr3:54655000-54655200	Enhancers	Fetal Muscle Leg	muscle
26	chr3:54655000-54662400	Weak transcription	Stomach Smooth Muscle	stomach
27	chr3:54655200-54655600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr3:54655200-54656200	Enhancers	Brain Germinal Matrix	brain
29	chr3:54655400-54655800	Enhancers	Fetal Brain Female	brain
30	chr3:54655600-54662800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr3:54655800-54656800	Weak transcription	Fetal Brain Female	brain
32	chr3:54656400-54656800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
33	chr3:54656800-54657000	Enhancers	Fetal Brain Female	brain
34	chr3:54656800-54657600	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr3:54657200-54657800	Enhancers	Esophagus	oesophagus
36	chr3:54657600-54658800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
37	chr3:54657800-54659800	Weak transcription	Esophagus	oesophagus
38	chr3:54658800-54659200	Enhancers	Fetal Muscle Leg	muscle
39	chr3:54658800-54659600	Enhancers	Breast Myoepithelial Primary Cells	Breast
40	chr3:54658800-54659800	Enhancers	Spleen	Spleen
41	chr3:54658800-54662800	Weak transcription	Ovary	ovary
42	chr3:54659200-54664600	Weak transcription	Fetal Muscle Leg	muscle
43	chr3:54659800-54660400	Enhancers	Esophagus	oesophagus
44	chr3:54659800-54662800	Weak transcription	Brain Anterior Caudate	brain
45	chr3:54659800-54664400	Weak transcription	Spleen	Spleen
46	chr3:54660400-54663000	Weak transcription	Esophagus	oesophagus
47	chr3:54660400-54666800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
48	chr3:54662200-54662600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr3:54662400-54662600	Enhancers	H1 Cell Line	embryonic stem cell
50	chr3:54662400-54663000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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