Variant report

Variant	nsv869121
Chromosome Location	chr9:22382290-23232146
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2382)
CpG islands
(count:306)
Chromatin interactive
region (count:49)
LncRNA
region (count:59)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2382 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:22395846-22395998	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:22470036-22470237	HepG2	liver:	n/a	n/a
3	BACH1	chr9:23088956-23089054	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr9:22446601-22447549	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr9:23229853-23230053	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr9:22856119-22856335	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr9:22992923-22993113	H1-hESC	embryonic stem cell:	n/a	n/a
8	BATF	chr9:22922324-22922554	GM12878	blood:	n/a	n/a
9	BATF	chr9:22913650-22913872	GM12878	blood:	n/a	n/a
10	BATF	chr9:22922274-22922624	GM12878	blood:	n/a	n/a
11	BCL3	chr9:22595889-22596111	GM12878	blood:	n/a	n/a
12	BCL3	chr9:22913627-22913874	GM12878	blood:	n/a	n/a
13	BCLAF1	chr9:22913614-22913896	GM12878	blood:	n/a	n/a
14	BHLHE40	chr9:22470028-22470208	GM12878	blood:	n/a	n/a
15	BHLHE40	chr9:22452449-22452715	GM12878	blood:	n/a	n/a
16	BHLHE40	chr9:22642399-22642402	GM12878	blood:	n/a	n/a
17	BHLHE40	chr9:22917384-22917393	GM12878	blood:	n/a	n/a
18	BHLHE40	chr9:22813725-22813875	GM12878	blood:	n/a	n/a
19	BHLHE40	chr9:22912811-22913992	GM12878	blood:	n/a	n/a
20	BHLHE40	chr9:22922390-22922656	GM12878	blood:	n/a	n/a
21	BRCA1	chr9:22528539-22528778	H1-hESC	embryonic stem cell:	n/a	n/a
22	BRCA1	chr9:22669815-22669872	Hela-S3	cervix:	n/a	n/a
23	BRCA1	chr9:22447348-22447473	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr9:22447786-22447815	Hela-S3	cervix:	n/a	n/a
25	CEBPB	chr9:22460217-22460486	HepG2	liver:	n/a	chr9:22460330-22460341
26	CEBPB	chr9:22766124-22766157	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr9:23205662-23205970	HepG2	liver:	n/a	chr9:23205789-23205800 chr9:23205817-23205828
28	CEBPB	chr9:22776328-22776436	H1-hESC	embryonic stem cell:	n/a	chr9:22776409-22776418 chr9:22776407-22776418
29	CEBPB	chr9:22642451-22642589	HepG2	liver:	n/a	chr9:22642528-22642539
30	CEBPB	chr9:22589018-22589244	HepG2	liver:	n/a	chr9:22589092-22589103 chr9:22589091-22589102 chr9:22589091-22589104
31	CEBPB	chr9:22446981-22447557	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr9:22463228-22463523	A549	lung:	n/a	n/a
33	CEBPB	chr9:23050601-23050915	A549	lung:	n/a	n/a
34	CEBPB	chr9:23205682-23205908	A549	lung:	n/a	chr9:23205789-23205800 chr9:23205817-23205828
35	CEBPB	chr9:23134358-23134627	A549	lung:	n/a	chr9:23134510-23134521
36	CEBPB	chr9:23062209-23062528	HepG2	liver:	n/a	chr9:23062351-23062362
37	CEBPB	chr9:22437308-22437334	IMR90	lung:	n/a	n/a
38	CEBPB	chr9:22709513-22709726	A549	lung:	n/a	n/a
39	CEBPB	chr9:22449781-22450073	A549	lung:	n/a	n/a
40	CEBPB	chr9:22776317-22776520	A549	lung:	n/a	chr9:22776409-22776418 chr9:22776407-22776418
41	CEBPB	chr9:22776252-22776563	IMR90	lung:	n/a	chr9:22776409-22776418 chr9:22776407-22776418
42	CEBPB	chr9:22384751-22384867	Hela-S3	cervix:	n/a	chr9:22384811-22384822
43	CEBPB	chr9:23129361-23129567	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr9:22449026-22449297	A549	lung:	n/a	n/a
45	CEBPB	chr9:22627879-22628176	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr9:23089053-23089404	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr9:23050578-23050908	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr9:22390852-22391041	A549	lung:	n/a	chr9:22391010-22391019 chr9:22391008-22391021 chr9:22391008-22391019
49	CEBPB	chr9:23087844-23088160	IMR90	lung:	n/a	n/a
50	CEBPB	chr9:22693164-22693367	IMR90	lung:	n/a	n/a

(count:306 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:22447679-22447729	ovcar-3	ovarian:	n/a
2	chr9:22447679-22447729	ovcar-3	ovarian:	n/a
3	chr9:22447679-22447729	PANC-1	pancreas:	n/a
4	chr9:22863277-22863327	MCF-7	breast:	n/a
5	chr9:22447694-22447744	NT2-D1	testis:	n/a
6	chr9:23089447-23089497	MCF10A-Er-Src	breast:	n/a
7	chr9:22863277-22863327	HCM	heart:	n/a
8	chr9:22447694-22447744	LNCaP	prostate:	n/a
9	chr9:22447679-22447729	HEEpiC	esophagus:	n/a
10	chr9:22863277-22863327	GM19239	blood:	n/a
11	chr9:22447694-22447744	SK-N-MC	brain:	n/a
12	chr9:22863277-22863327	AG04450	lung:	fetal
13	chr9:22447679-22447729	HCPEpiC	choroid plexus:	n/a
14	chr9:22447694-22447744	GM12878	blood:	n/a
15	chr9:23089447-23089497	ProgFib	skin:	n/a
16	chr9:22447694-22447744	Jurkat	blood:	n/a
17	chr9:22447694-22447744	AG04450	lung:	fetal
18	chr9:23089447-23089497	Hela-S3	cervix:	n/a
19	chr9:22447694-22447744	HEEpiC	esophagus:	n/a
20	chr9:23089447-23089497	NB4	blood:	n/a
21	chr9:22446830-22446880	HAEpiC	amniotic membrane:	n/a
22	chr9:22447679-22447729	HIPEpiC	eye:	n/a
23	chr9:23089447-23089497	SAEC	small airway:	n/a
24	chr9:22447679-22447729	CMK	blood:	n/a
25	chr9:22446830-22446880	ovcar-3	ovarian:	n/a
26	chr9:22447679-22447729	AG04449	skin:	fetal
27	chr9:22863277-22863327	MCF10A-Er-Src	breast:	n/a
28	chr9:23089447-23089497	U87	brain:	n/a
29	chr9:23089447-23089497	NHBE	bronchial:	n/a
30	chr9:22863277-22863327	HCF	heart:	n/a
31	chr9:22446830-22446880	HCM	heart:	n/a
32	chr9:22863277-22863327	AoSMC	blood vessel:	n/a
33	chr9:23089447-23089497	HRCEpiC	kidney:	n/a
34	chr9:23089447-23089497	Caco-2	colon:	n/a
35	chr9:22447694-22447744	HCM	heart:	n/a
36	chr9:22863277-22863327	LNCaP	prostate:	n/a
37	chr9:22863277-22863327	PANC-1	pancreas:	n/a
38	chr9:22447679-22447729	HCF	heart:	n/a
39	chr9:22447679-22447729	IMR90	lung:	fetal
40	chr9:22447679-22447729	Caco-2	colon:	n/a
41	chr9:22447694-22447744	HRPEpiC	eye:	n/a
42	chr9:22863277-22863327	HMEC	breast:	n/a
43	chr9:23089447-23089497	AG04449	skin:	fetal
44	chr9:22447694-22447744	ovcar-3	ovarian:	n/a
45	chr9:22446830-22446880	SAEC	small airway:	n/a
46	chr9:22863277-22863327	SK-N-SH	brain:	n/a
47	chr9:23089447-23089497	HRE	kidney:	n/a
48	chr9:23089447-23089497	PrEC	prostate:	n/a
49	chr9:22446830-22446880	HEEpiC	esophagus:	n/a
50	chr9:22863277-22863327	ovcar-3	ovarian:	n/a

(count:49 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:73470070..73470855-chr9:22831107..22832031,2	MCF-7	breast:
2	chr2:192866140..192866660-chr9:23112962..23113482,2	MCF-7	breast:
3	chr9:22458728..22461056-chr9:22461148..22464605,3	MCF-7	breast:
4	chr7:36807619..36808639-chr9:23112488..23113483,3	MCF-7	breast:
5	chr9:22308840..22311118-chr9:22450216..22453208,2	MCF-7	breast:
6	chr9:22387862..22390330-chr9:22390614..22392458,2	MCF-7	breast:
7	chr11:42828883..42829388-chr9:23172788..23173289,2	MCF-7	breast:
8	chr6:106577878..106578397-chr9:23112963..23113482,2	MCF-7	breast:
9	chr11:21332888..21333408-chr9:23112962..23113482,2	MCF-7	breast:
10	chr9:22382641..22384456-chr9:22445640..22448054,2	MCF-7	breast:
11	chr9:22402119..22404171-chr9:22444827..22446805,2	MCF-7	breast:
12	chr5:154575726..154576227-chr9:23112482..23112988,2	MCF-7	breast:
13	chr9:22306745..22307713-chr9:22451254..22452991,10	MCF-7	breast:
14	chr9:22310557..22311090-chr9:22452173..22453079,2	MCF-7	breast:
15	chr8:64119199..64121386-chr9:22867154..22869791,2	MCF-7	breast:
16	chr9:22307010..22307656-chr9:22452126..22452959,2	MCF-7	breast:
17	chr6:133352133..133352653-chr9:23112962..23113483,3	MCF-7	breast:
18	chr9:22307897..22308732-chr9:22452148..22452666,2	MCF-7	breast:
19	chr9:22402119..22404171-chr9:22444827..22446805,2	MCF-7	breast:
20	chr9:22427036..22429710-chr9:22446028..22448519,3	MCF-7	breast:
21	chr9:22383558..22386064-chr9:22393269..22395757,2	MCF-7	breast:
22	chr9:22388944..22390962-chr9:22393020..22395362,2	MCF-7	breast:
23	chr9:23122908..23123759-chr9:23702615..23703167,2	MCF-7	breast:
24	chr9:22307986..22308923-chr9:22452329..22453109,4	MCF-7	breast:
25	chr9:22388944..22390962-chr9:22393020..22395362,2	MCF-7	breast:
26	chr9:22813272..22814142-chr9:23088887..23089663,2	MCF-7	breast:
27	chr15:65596803..65598452-chr9:22707864..22709364,2	K562	blood:
28	chr10:14795069..14796069-chr9:23112483..23113483,2	MCF-7	breast:
29	chr15:65596780..65597412-chr9:22707344..22708364,4	MCF-7	breast:
30	chr9:22813272..22814142-chr9:23088887..23089663,2	MCF-7	breast:
31	chr7:2109017..2109524-chr9:22685897..22686685,2	MCF-7	breast:
32	chr9:22307465..22309728-chr9:22452088..22453632,2	MCF-7	breast:
33	chr9:22342552..22344579-chr9:22390946..22393020,2	MCF-7	breast:
34	chr9:22302782..22305026-chr9:22452967..22455959,2	MCF-7	breast:
35	chr15:65596519..65598485-chr9:22707844..22709364,2	MCF-7	breast:
36	chr2:31059867..31060868-chr9:23112468..23113488,6	MCF-7	breast:
37	chr9:22458728..22461056-chr9:22461148..22464605,3	MCF-7	breast:
38	chr9:22383558..22386064-chr9:22393269..22395757,2	MCF-7	breast:
39	chr9:22446916..22448600-chr9:22452229..22454221,2	MCF-7	breast:
40	chr9:22445038..22447734-chr9:22449457..22451257,2	MCF-7	breast:
41	chr9:22387862..22390330-chr9:22390614..22392458,2	MCF-7	breast:
42	chr9:22446916..22448600-chr9:22452229..22454221,2	MCF-7	breast:
43	chr4:146024840..146025360-chr9:23112962..23113488,4	MCF-7	breast:
44	chr16:8047523..8048523-chr9:23112468..23113483,3	MCF-7	breast:
45	chr14:97951358..97952245-chr9:22442748..22443596,2	MCF-7	breast:
46	chr9:23122886..23123705-chr9:23491931..23492782,5	MCF-7	breast:
47	chr9:23231305..23232959-chr9:23233124..23236027,2	MCF-7	breast:
48	chr4:116457976..116458496-chr9:23112963..23113482,2	MCF-7	breast:
49	chr17:50247132..50248132-chr9:23112463..23113462,2	MCF-7	breast:

(count:59 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DMRTA1-17	chr9:23021791-23024225	NONHSAT130454
2	lnc-DMRTA1-1	chr9:22767106-22768486	NONHSAT130449
3	lnc-CDKN2B-5	chr9:22651795-22652209	NONHSAT130440
4	lnc-DMRTA1-13	chr9:22757961-22758315	NONHSAT130448
5	lnc-DMRTA1-19	chr9:23135570-23138227	NONHSAT130457
6	lnc-DMRTA1-16	chr9:22961585-22962194	NONHSAT130453
7	lnc-DMRTA1-18	chr9:23070718-23070974	NONHSAT130455
8	lnc-DMRTA1-2	chr9:22682609-22682712	ENSG00000234840.1
9	lnc-ELAVL2-6	chr9:23135106-23135246	NONHSAT130456
10	lnc-DMRTA1-10	chr9:22713308-22713435	l_3742_chr9:22664441-22713435_adipose
11	lnc-DMRTA1-14	chr9:22754997-22755223	NONHSAT130447
12	lnc-DMRTA1-2	chr9:22674442-22674642	ENSG00000234840.1
13	lnc-DMRTA1-15	chr9:22842077-22844127	NONHSAT130451
14	lnc-DMRTA1-15	chr9:22847494-22847573	NONHSAT130451
15	lnc-DMRTA1-12	chr9:22725718-22725880	NONHSAT130446
16	lnc-DMRTA1-1	chr9:22682469-22683267	NONHSAT130441
17	lnc-DMRTA1-11	chr9:22714322-22715083	NONHSAT130445
18	lnc-DMRTA1-2	chr9:22823251-22824212	ENSG00000234840.1
19	lnc-DMRTA1-1	chr9:22683873-22684083	NONHSAT130441
20	lnc-DMRTA1-16	chr9:22956556-22957737	FPKM1_group_32840_transcript_3
21	lnc-DMRTA1-8	chr9:22532908-22532978	NONHSAT130438
22	lnc-DMRTA1-11	chr9:22716040-22716456	NONHSAT130445
23	lnc-DMRTA1-15	chr9:22840524-22841967	NONHSAT130451
24	lnc-DMRTA1-16	chr9:22961585-22961645	FPKM1_group_32840_transcript_3
25	lnc-DMRTA1-11	chr9:22715216-22715757	NONHSAT130445
26	lnc-DMRTA1-21	chr9:23173069-23174316	NONHSAT130459
27	lnc-DMRTA1-2	chr9:22682469-22682712	ENSG00000234840.1
28	lnc-DMRTA1-8	chr9:22535270-22535651	NONHSAT130438
29	lnc-DMRTA1-1	chr9:22767174-22767298	NONHSAT130443
30	lnc-CDKN2B-5	chr9:22636866-22636923	NONHSAT130440
31	lnc-DMRTA1-8	chr9:22524260-22524507	NONHSAT130438
32	lnc-DMRTA1-1	chr9:22723308-22723429	NONHSAT130443
33	lnc-DMRTA1-1	chr9:22767961-22768315	ENSG00000224549
34	lnc-DMRTA1-18	chr9:23071107-23071255	NONHSAT130455
35	lnc-DMRTA1-1	chr9:22682609-22682712	NONHSAT130443
36	lnc-DMRTA1-8	chr9:22521541-22521617	NONHSAT130438
37	lnc-DMRTA1-14	chr9:22764211-22764434	NONHSAT130447
38	lnc-DMRTA1-1	chr9:22674481-22674642	NONHSAT130443
39	lnc-DMRTA1-14	chr9:22759737-22759837	NONHSAT130447
40	lnc-DMRTA1-10	chr9:22664442-22664642	l_3742_chr9:22664441-22713435_adipose
41	lnc-DMRTA1-13	chr9:22757174-22757265	NONHSAT130448
42	lnc-DMRTA1-10	chr9:22672609-22672712	l_3742_chr9:22664441-22713435_adipose
43	lnc-DMRTA1-16	chr9:22956556-22957737	NONHSAT130453
44	lnc-DMRTA1-20	chr9:23150179-23150778	NONHSAT130458
45	lnc-DMRTA1-9	chr9:22602231-22602323	NONHSAT130439
46	lnc-DMRTA1-1	chr9:22674434-22674694	NONHSAT130441
47	lnc-DMRTA1-1	chr9:22767174-22767265	ENSG00000224549
48	lnc-ELAVL2-6	chr9:23134828-23134944	NONHSAT130456
49	lnc-DMRTA1-1	chr9:22646108-22646877	NONHSAT130441
50	lnc-DMRTA1-2	chr9:22687546-22687626	ENSG00000234840.1

No data

Variant related genes	Relation type
DMRTA1	TF binding region
ENSG00000236739	TF binding region
ENSG00000234840	TF binding region
ENSG00000224549	TF binding region
ENSG00000265572	TF binding region
DMRTA1	CpG island
ENSG00000236739	CpG island
ENSG00000234840	CpG island
ENSG00000224549	CpG island
ENSG00000265572	CpG island
ENSG00000176399	chromatin interactions
ENSG00000200156	chromatin interactions

Extended variants
information (count: 24756 )
Associated
traits (count: 169 )

Variant overlapped rSNPs/rCNVs (count:24756 , 50 per page) page: 1 2 3 4 5 6 7 ... 496

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs569285194	chr9:22382296-22382297	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs181032565	chr9:22382332-22382333	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs564493325	chr9:22382350-22382351	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs374041006	chr9:22382389-22382390	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs115487940	chr9:22382390-22382391	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs142347109	chr9:22382391-22382392	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs944036	chr9:22382412-22382413	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs151289246	chr9:22382416-22382417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs944037	chr9:22382449-22382450	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs538718273	chr9:22382463-22382464	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs140558066	chr9:22382500-22382501	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs566052352	chr9:22382512-22382513	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs535033091	chr9:22382513-22382514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs538725337	chr9:22382535-22382536	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs79653809	chr9:22382564-22382565	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs573882776	chr9:22382587-22382588	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs536445328	chr9:22382635-22382636	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs1410974	chr9:22382636-22382637	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs116404126	chr9:22382647-22382648	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs145629001	chr9:22382656-22382657	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs564651780	chr9:22382677-22382678	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs113913835	chr9:22382729-22382730	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs4977775	chr9:22382738-22382739	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs542538290	chr9:22382764-22382765	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs540653667	chr9:22382770-22382771	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs112656611	chr9:22382777-22382778	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs7846832	chr9:22382859-22382860	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs186021647	chr9:22382860-22382861	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs367853525	chr9:22382874-22382875	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs550460084	chr9:22382876-22382877	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs190922349	chr9:22382882-22382883	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs4977776	chr9:22382900-22382901	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs552670262	chr9:22382971-22382972	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs181933589	chr9:22383008-22383009	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs535765951	chr9:22383016-22383017	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs17237038	chr9:22383028-22383029	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs548650685	chr9:22383035-22383036	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs4977777	chr9:22383058-22383059	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs34033528	chr9:22383084-22383085	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs375186410	chr9:22383085-22383086	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs140758056	chr9:22383086-22383087	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs113231293	chr9:22383096-22383097	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs397730501	chr9:22383100-22383101	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs536108557	chr9:22383109-22383110	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs80300035	chr9:22383117-22383118	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs556143221	chr9:22383141-22383142	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs538477372	chr9:22383147-22383148	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs545898723	chr9:22383156-22383157	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs564556394	chr9:22383170-22383171	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs147752019	chr9:22383190-22383191	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:169)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Cancer	22183965	CNVD
Glioblastoma multiforme	21569311	CNVD
Myelofibrosis	22110671	CNVD
Ewing''s sarcoma	22429812	CNVD
Neuroblastoma	21899760	CNVD
Glioblastoma multiforme	19435819	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Lung cancer	21911935	CNVD
Primary central nervous system lymphoma	21088137	CNVD
head and neck squamous cell carcinoma	21798897	CNVD
Cancer	21253487	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Glioblastoma multiforme	21922591	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Urothelial cell carcinoma	18451213	CNVD
Glioma	17123091	CNVD
Mental retardation	17124404	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute lymphoblastic leukemia	18768390	CNVD
Leukemia	19602459	CNVD
Acute monocytic leukemia	16498392	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Leukemia	18688285	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Acute myeloid leukemia	19651601	CNVD
Coronary Disease	20032323	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21732550	CNVD
Gastric cancer	22539939	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Metastatic melanoma	18483359	CNVD
Non-small cell lung cancer	20864512	CNVD
Cervical cancer	21062161	CNVD
Acute myeloid leukemia	16864856	CNVD
Glioblastoma	17090523	CNVD
Lung cancer	16773561	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16774939	CNVD
Bladder cancer	19088036	CNVD
Colorectal cancer	16272173	CNVD
Melanoma	16977458	CNVD
Glioblastoma multiforme	17369134	CNVD
Chagasic megaesophagus	20163722	CNVD
Melanoma	19566914	CNVD
Squamous cell cancer	19047905	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Hodgkin''s lymphoma	18179710	CNVD
Glioma	20126413	CNVD
Melanoma	17363583	CNVD
Glioblastoma multiforme	19115005	CNVD
Glioblastoma multiforme	21138945	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Cancer	20581869	CNVD
Oral cancer	22144094	CNVD
Barrett''s syndrome	19417022	CNVD
Cancer	20164920	CNVD
Breast cancer	17142309	CNVD
Ependymoma	18628472	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Acute myeloid leukemia	21251322	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21364760	CNVD
Acute myeloid leukemia	17237825	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-small cell lung cancer	16651412	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Non-syndromic sensorineural hearing loss	19036926	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
early-passage human iPS cells	21368824	CNVD
Glioblastoma multiforme	21525872	CNVD
Pancreatic cancer	21811587	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1292 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:22380600-22382400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr9:22382000-22382400	Enhancers	Muscle Satellite Cultured Cells	--
3	chr9:22382200-22383800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr9:22382400-22388800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr9:22383800-22384000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr9:22384000-22384600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr9:22384600-22384800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr9:22384800-22389000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr9:22386800-22387000	Weak transcription	Stomach Mucosa	stomach
10	chr9:22387000-22387200	Enhancers	Stomach Mucosa	stomach
11	chr9:22387200-22389000	Weak transcription	Stomach Mucosa	stomach
12	chr9:22388000-22389000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr9:22388800-22389600	Enhancers	Esophagus	oesophagus
14	chr9:22388800-22390400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr9:22389000-22390000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr9:22389000-22390200	Enhancers	Stomach Mucosa	stomach
17	chr9:22389000-22390600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr9:22389200-22389600	Enhancers	NHEK	skin
19	chr9:22389200-22390200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr9:22389400-22389600	ZNF genes & repeats	Pancreas	Pancrea
21	chr9:22389800-22390200	Enhancers	Fetal Brain Female	brain
22	chr9:22390000-22390200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr9:22390200-22392400	Weak transcription	Stomach Mucosa	stomach
24	chr9:22390400-22392800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr9:22392400-22393200	Enhancers	Stomach Mucosa	stomach
26	chr9:22392800-22393000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr9:22395400-22395600	Enhancers	A549	lung
28	chr9:22395600-22395800	Enhancers	NH-A	brain
29	chr9:22395600-22396000	Flanking Active TSS	A549	lung
30	chr9:22395600-22396200	Enhancers	Hela-S3	cervix
31	chr9:22395600-22396400	Enhancers	Muscle Satellite Cultured Cells	--
32	chr9:22395600-22396600	Enhancers	HMEC	breast
33	chr9:22395800-22397000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr9:22396000-22396600	Enhancers	A549	lung
35	chr9:22397000-22399200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr9:22399200-22399400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr9:22400000-22400200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr9:22400200-22406200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr9:22401400-22401600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr9:22406200-22406400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr9:22406200-22406600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr9:22413800-22414400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr9:22413800-22416400	Enhancers	Muscle Satellite Cultured Cells	--
44	chr9:22414000-22414600	Enhancers	HUVEC	blood vessel
45	chr9:22414200-22414400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr9:22414400-22415800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr9:22414400-22415800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr9:22414600-22415000	Weak transcription	HUVEC	blood vessel
49	chr9:22415000-22416200	Enhancers	HUVEC	blood vessel
50	chr9:22415800-22416600	Enhancers	NH-A	brain

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