Variant report

Variant	nsv869288
Chromosome Location	chr9:12286919-12816766
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4321)
CpG islands
(count:488)
Chromatin interactive
region (count:106)
LncRNA
region (count:13)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4321 , 50 per page) page: 1 2 3 4 5 6 7 ... 87

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:12815975-12816358	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:12813647-12814934	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:12816761-12818215	HepG2	liver:	n/a	chr9:12817708-12817724
4	ARID3A	chr9:12328968-12329168	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:12814233-12814684	K562	blood:	n/a	n/a
6	ARID3A	chr9:12812740-12812885	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:12719466-12719806	HepG2	liver:	n/a	n/a
8	ARID3A	chr9:12794096-12794882	HepG2	liver:	n/a	n/a
9	ARID3A	chr9:12775950-12776944	HepG2	liver:	n/a	n/a
10	ARID3A	chr9:12702242-12702514	HepG2	liver:	n/a	n/a
11	ARID3A	chr9:12784048-12785110	HepG2	liver:	n/a	n/a
12	ATF1	chr9:12814215-12814687	K562	blood:	n/a	n/a
13	ATF2	chr9:12735544-12735972	GM12878	blood:	n/a	n/a
14	ATF2	chr9:12735567-12735964	GM12878	blood:	n/a	n/a
15	ATF3	chr9:12784352-12784992	A549	lung:	n/a	n/a
16	ATF3	chr9:12814080-12814958	HCT-116	colon:	n/a	n/a
17	ATF3	chr9:12814089-12814909	HCT-116	colon:	n/a	n/a
18	ATF3	chr9:12814116-12814883	A549	lung:	n/a	n/a
19	ATF3	chr9:12776028-12776603	A549	lung:	n/a	n/a
20	ATF3	chr9:12784324-12785046	A549	lung:	n/a	n/a
21	ATF3	chr9:12814140-12814884	A549	lung:	n/a	n/a
22	ATF3	chr9:12708586-12708908	HCT-116	colon:	n/a	n/a
23	BACH1	chr9:12784537-12784775	K562	blood:	n/a	n/a
24	BACH1	chr9:12292536-12292567	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr9:12775963-12776675	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr9:12567176-12567212	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr9:12653013-12653212	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr9:12784589-12784652	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:12497880-12498136	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr9:12469180-12469392	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr9:12465730-12465736	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr9:12604207-12604421	H1-hESC	embryonic stem cell:	n/a	chr9:12604278-12604292
33	BATF	chr9:12784440-12784836	GM12878	blood:	n/a	chr9:12784627-12784638
34	BATF	chr9:12329455-12329670	GM12878	blood:	n/a	n/a
35	BATF	chr9:12784487-12784808	GM12878	blood:	n/a	chr9:12784627-12784638
36	BCL11A	chr9:12784486-12784786	GM12878	blood:	n/a	n/a
37	BCL3	chr9:12814100-12814872	A549	lung:	n/a	n/a
38	BCL3	chr9:12784331-12785068	A549	lung:	n/a	n/a
39	BCL3	chr9:12775887-12777064	A549	lung:	n/a	chr9:12776114-12776127
40	BCL3	chr9:12774751-12775592	A549	lung:	n/a	chr9:12775208-12775217
41	BCL3	chr9:12813964-12815230	A549	lung:	n/a	chr9:12814953-12814962
42	BCL3	chr9:12784221-12785015	A549	lung:	n/a	n/a
43	BCL3	chr9:12775944-12776770	A549	lung:	n/a	chr9:12776114-12776127
44	BCL3	chr9:12794096-12794785	A549	lung:	n/a	n/a
45	BCLAF1	chr9:12329426-12329668	GM12878	blood:	n/a	n/a
46	BHLHE40	chr9:12776058-12776346	HepG2	liver:	n/a	n/a
47	BHLHE40	chr9:12776329-12776638	K562	blood:	n/a	n/a
48	BHLHE40	chr9:12814024-12814857	HepG2	liver:	n/a	n/a
49	BHLHE40	chr9:12776015-12776514	GM12878	blood:	n/a	chr9:12776042-12776058
50	BHLHE40	chr9:12775478-12776767	HepG2	liver:	n/a	chr9:12775512-12775528 chr9:12776042-12776058

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:12775700-12775750	HMEC	breast:	n/a
2	chr9:12776046-12776096	HUVEC	blood vessel:	n/a
3	chr9:12775750-12775800	ProgFib	skin:	n/a
4	chr9:12704964-12705014	SK-N-SH	brain:	n/a
5	chr9:12704964-12705014	HCF	heart:	n/a
6	chr9:12774985-12775035	PANC-1	pancreas:	n/a
7	chr9:12693326-12693376	PrEC	prostate:	n/a
8	chr9:12704964-12705014	SAEC	small airway:	n/a
9	chr9:12775700-12775750	SK-N-SH_RA	brain:	n/a
10	chr9:12774985-12775035	HRCEpiC	kidney:	n/a
11	chr9:12775700-12775750	ovcar-3	ovarian:	n/a
12	chr9:12775700-12775750	AG04450	lung:	fetal
13	chr9:12776046-12776096	K562	blood:	n/a
14	chr9:12693694-12693744	NT2-D1	testis:	n/a
15	chr9:12693694-12693744	HEK293	kidney:	embryo
16	chr9:12693694-12693744	AG04450	lung:	fetal
17	chr9:12776046-12776096	ProgFib	skin:	n/a
18	chr9:12776218-12776268	SK-N-SH_RA	brain:	n/a
19	chr9:12704964-12705014	AG09319	gingival:	n/a
20	chr9:12693694-12693744	LNCaP	prostate:	n/a
21	chr9:12693326-12693376	GM06990	blood:	n/a
22	chr9:12776046-12776096	H1-hESC	embryonic stem cell:	embryo
23	chr9:12704964-12705014	A549	lung:	n/a
24	chr9:12693326-12693376	AG04450	lung:	fetal
25	chr9:12776218-12776268	HMEC	breast:	n/a
26	chr9:12776218-12776268	HCM	heart:	n/a
27	chr9:12776218-12776268	AG09319	gingival:	n/a
28	chr9:12693694-12693744	NHBE	bronchial:	n/a
29	chr9:12704964-12705014	PrEC	prostate:	n/a
30	chr9:12775750-12775800	LNCaP	prostate:	n/a
31	chr9:12775750-12775800	HPAEpiC	pulmonary alveolar:	n/a
32	chr9:12775700-12775750	GM12891	blood:	n/a
33	chr9:12774985-12775035	NB4	blood:	n/a
34	chr9:12693326-12693376	Caco-2	colon:	n/a
35	chr9:12775750-12775800	GM12878	blood:	n/a
36	chr9:12774985-12775035	A549	lung:	n/a
37	chr9:12776046-12776096	PrEC	prostate:	n/a
38	chr9:12775750-12775800	BE2_C	brain:	n/a
39	chr9:12704964-12705014	SK-N-MC	brain:	n/a
40	chr9:12704964-12705014	MCF-7	breast:	n/a
41	chr9:12775750-12775800	AG04449	skin:	fetal
42	chr9:12775700-12775750	GM12892	blood:	n/a
43	chr9:12775700-12775750	HRCEpiC	kidney:	n/a
44	chr9:12776218-12776268	GM12878	blood:	n/a
45	chr9:12693694-12693744	NH-A	brain:	n/a
46	chr9:12775750-12775800	HepG2	liver:	n/a
47	chr9:12776218-12776268	AG10803	skin:	n/a
48	chr9:12776046-12776096	SAEC	small airway:	n/a
49	chr9:12776046-12776096	PFSK-1	brain:	n/a
50	chr9:12776046-12776096	T-47D	breast:	n/a

(count:106 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:12694806..12696732-chr9:12696808..12698503,2	MCF-7	breast:
2	chr9:12715023..12717622-chr9:12718396..12720573,2	MCF-7	breast:
3	chr9:12748565..12752577-chr9:12774636..12778893,4	MCF-7	breast:
4	chr9:12775994..12778011-chr9:12786037..12787743,2	K562	blood:
5	chr9:12774105..12776446-chr9:12796570..12799387,2	MCF-7	breast:
6	chr9:12631997..12633907-chr9:12634270..12637039,2	MCF-7	breast:
7	chr9:12526692..12528486-chr9:12531576..12533111,2	MCF-7	breast:
8	chr9:12771458..12774120-chr9:12775878..12777874,2	K562	blood:
9	chr9:12783262..12785196-chr9:12857512..12860310,2	MCF-7	breast:
10	chr9:12723451..12724539-chr9:12884675..12885414,3	MCF-7	breast:
11	chr9:12785493..12787579-chr9:12811391..12813312,2	MCF-7	breast:
12	chr9:12723685..12724314-chr9:12988034..12988919,3	MCF-7	breast:
13	chr9:12809497..12811104-chr9:12812287..12814300,2	MCF-7	breast:
14	chr9:12554435..12555308-chr9:12639713..12640600,2	MCF-7	breast:
15	chr9:12775140..12777800-chr9:12796207..12799105,2	K562	blood:
16	chr9:12784767..12786871-chr9:12796425..12798748,2	MCF-7	breast:
17	chr9:12774109..12791345-chr9:12812800..12822770,37	MCF-7	breast:
18	chr9:12794075..12796517-chr9:12813544..12816073,2	MCF-7	breast:
19	chr9:12709414..12711296-chr9:14429666..14432393,2	MCF-7	breast:
20	chr9:12776384..12777092-chr9:12988313..12988856,2	MCF-7	breast:
21	chr9:12794123..12798425-chr9:12799018..12802796,5	MCF-7	breast:
22	chr9:12728162..12729688-chr9:12774800..12776867,2	MCF-7	breast:
23	chr9:12554435..12555308-chr9:12639713..12640600,2	MCF-7	breast:
24	chr9:12723429..12724424-chr9:12884471..12885741,6	MCF-7	breast:
25	chr9:12715023..12717622-chr9:12718396..12720573,2	MCF-7	breast:
26	chr9:12716514..12718700-chr9:12776478..12778096,2	MCF-7	breast:
27	chr9:12774954..12777056-chr9:12883374..12886318,3	MCF-7	breast:
28	chr9:12737180..12738894-chr9:12739213..12741322,2	MCF-7	breast:
29	chr9:12773969..12780098-chr9:12789328..12796142,13	MCF-7	breast:
30	chr9:12774319..12775976-chr9:12801872..12803906,2	MCF-7	breast:
31	chr1:149223798..149224416-chr9:12526808..12527328,4	MCF-7	breast:
32	chr9:12815854..12818984-chr9:12830927..12834079,3	MCF-7	breast:
33	chr9:12793649..12798936-chr9:12813991..12818779,7	MCF-7	breast:
34	chr9:12774903..12777791-chr9:12804200..12806212,3	MCF-7	breast:
35	chr9:12708111..12711033-chr9:13076014..13078647,2	MCF-7	breast:
36	chr9:12719485..12720037-chr9:12987933..12988498,2	MCF-7	breast:
37	chr9:12771458..12774120-chr9:12775878..12777874,2	K562	blood:
38	chr9:12784133..12787098-chr9:12813508..12817370,4	MCF-7	breast:
39	chr9:12631997..12633907-chr9:12634270..12637039,2	MCF-7	breast:
40	chr9:12791617..12793320-chr9:12793855..12796172,2	MCF-7	breast:
41	chr9:12774525..12776496-chr9:12779870..12781458,2	MCF-7	breast:
42	chr9:10855828..10856443-chr9:12329128..12329639,2	MCF-7	breast:
43	chr1:186649939..186650766-chr9:12429991..12430491,2	Hela-S3	cervix:
44	chr9:12786137..12788108-chr9:12801967..12804015,2	MCF-7	breast:
45	chr9:12729225..12731478-chr9:12790178..12792905,2	MCF-7	breast:
46	chr9:12495478..12497603-chr9:12499554..12502350,2	MCF-7	breast:
47	chr9:12788711..12790306-chr9:12792707..12794507,2	K562	blood:
48	chr9:12615022..12617476-chr9:12617492..12619010,2	MCF-7	breast:
49	chr9:12809497..12811104-chr9:12812287..12814300,2	MCF-7	breast:
50	chr9:12784767..12786871-chr9:12796425..12798748,2	MCF-7	breast:

(count:13 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MPDZ-8	chr9:12764762-12765054	NONHSAT130228
2	lnc-MPDZ-1	chr9:12759551-12759623	ENSG00000235448.1
3	lnc-MPDZ-1	chr9:12814292-12814344	ENSG00000235448.1
4	lnc-C9orf150-4	chr9:12693309-12693478	NONHSAT130224
5	lnc-MPDZ-1	chr9:12790619-12790764	ENSG00000235448.1
6	lnc-TYRP1-4	chr9:12287320-12288238	NONHSAT130222
7	lnc-MPDZ-1	chr9:12700100-12700626	ENSG00000235448.1
8	lnc-C9orf150-2	chr9:12728519-12728662	l_3734_chr9:12728518-12759537_heart
9	lnc-C9orf150-4	chr9:12693912-12694487	NONHSAT130224
10	lnc-C9orf150-1	chr9:12738519-12738662	XLOC_007283
11	lnc-C9orf150-2	chr9:12759301-12759537	l_3734_chr9:12728518-12759537_heart
12	lnc-C9orf150-2	chr9:12758922-12759300	l_3734_chr9:12728518-12759537_heart
13	lnc-C9orf150-1	chr9:12768922-12770158	XLOC_007283

No data

Variant related genes	Relation type
RN7SL849P	TF binding region
ENSG00000231491	TF binding region
TYRP1	TF binding region
LURAP1L	TF binding region
RNU2-47P	TF binding region
ENSG00000235448	TF binding region
RN7SL849P	CpG island
ENSG00000231491	CpG island
TYRP1	CpG island
LURAP1L	CpG island
RNU2-47P	CpG island
ENSG00000235448	CpG island
ENSG00000269093	chromatin interactions
ENSG00000235448	chromatin interactions
ENSG00000178904	chromatin interactions
ENSG00000107165	chromatin interactions
ENSG00000153714	chromatin interactions
ENSG00000267213	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000223621	chromatin interactions
ENSG00000222658	chromatin interactions

Extended variants
information (count: 13680 )
Associated
traits (count: 111 )

Variant overlapped rSNPs/rCNVs (count:13680 , 50 per page) page: 1 2 3 4 5 6 7 ... 274

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs544379749	chr9:12287342-12287343	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs561113942	chr9:12287343-12287344	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs574776337	chr9:12287394-12287395	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs180726428	chr9:12287407-12287408	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs370939070	chr9:12287419-12287420	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs559764583	chr9:12287480-12287481	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs184900858	chr9:12287514-12287515	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs1106474	chr9:12287518-12287519	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs551770435	chr9:12287532-12287533	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs573536663	chr9:12287539-12287540	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs565196472	chr9:12287542-12287543	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs576260034	chr9:12287543-12287544	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs531035660	chr9:12287570-12287571	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs570703495	chr9:12287590-12287591	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs73412936	chr9:12287610-12287611	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs114516211	chr9:12287615-12287616	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs140420511	chr9:12287634-12287635	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs546917079	chr9:12287656-12287657	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs567176075	chr9:12287665-12287666	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs367942308	chr9:12287666-12287667	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
21	rs371817735	chr9:12287671-12287672	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
22	rs555831565	chr9:12287684-12287685	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
23	rs572355643	chr9:12287692-12287693	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
24	rs200781329	chr9:12287694-12287695	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
25	rs147694360	chr9:12287695-12287696	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
26	rs372784434	chr9:12287696-12287697	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
27	rs201394056	chr9:12287703-12287704	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs1416581	chr9:12287727-12287728	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs578050032	chr9:12287728-12287729	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs115811754	chr9:12287729-12287730	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs10960565	chr9:12287735-12287736	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs188458694	chr9:12287737-12287738	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
33	rs181693735	chr9:12287759-12287760	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
34	rs185826724	chr9:12287765-12287766	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
35	rs540457862	chr9:12287806-12287807	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
36	rs1416582	chr9:12287871-12287872	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs372347028	chr9:12287882-12287883	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
38	rs7042930	chr9:12287892-12287893	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs144279458	chr9:12287900-12287901	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
40	rs530898657	chr9:12287913-12287914	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
41	rs550692876	chr9:12287920-12287921	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs532823500	chr9:12287928-12287929	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs369618460	chr9:12287931-12287932	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
44	rs147779376	chr9:12287978-12287979	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
45	rs546806531	chr9:12288000-12288001	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
46	rs529144335	chr9:12288001-12288002	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
47	rs567010871	chr9:12288048-12288049	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
48	rs113614928	chr9:12288054-12288055	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
49	rs10960566	chr9:12288078-12288079	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs7872992	chr9:12288083-12288084	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:111)

Disease	PMID	Source
Disorders of sex development	21048976	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Cancer	20164920	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	21764851	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Gastric cancer	16891809	CNVD
Mental retardation	17847001	CNVD
Cutaneous squamous cell carcinomas	17420988	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21611746	CNVD
Melanoma	22183965	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Chordoma	21215367	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	21811587	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:2239 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:12289600-12290200	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr9:12289600-12290200	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr9:12289600-12290200	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr9:12289600-12290200	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr9:12289600-12290400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr9:12289800-12290200	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr9:12289800-12290200	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr9:12289800-12290200	Enhancers	Brain Germinal Matrix	brain
9	chr9:12289800-12290400	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr9:12289800-12290400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr9:12289800-12290600	Enhancers	Brain Inferior Temporal Lobe	brain
12	chr9:12290000-12290600	Enhancers	Brain Cingulate Gyrus	brain
13	chr9:12290000-12290600	Enhancers	Brain Hippocampus Middle	brain
14	chr9:12290000-12291000	Enhancers	Brain Substantia Nigra	brain
15	chr9:12290200-12290800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr9:12292200-12293000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr9:12294200-12294600	Active TSS	Fetal Lung	lung
18	chr9:12302000-12302400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr9:12314400-12317200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr9:12318800-12319800	Enhancers	Adipose Nuclei	Adipose
21	chr9:12324000-12324400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr9:12324400-12329000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr9:12328800-12329000	Enhancers	Liver	Liver
24	chr9:12328800-12329000	Enhancers	Pancreas	Pancrea
25	chr9:12329000-12329200	Enhancers	Adipose Nuclei	Adipose
26	chr9:12329000-12329200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr9:12329000-12329200	Enhancers	Fetal Muscle Trunk	muscle
28	chr9:12329000-12329400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr9:12329000-12329400	Flanking Active TSS	Liver	Liver
30	chr9:12329000-12329600	Active TSS	ES-I3 Cell Line	embryonic stem cell
31	chr9:12329000-12329600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr9:12329000-12329600	Active TSS	Pancreatic Islets	Pancreatic Islet
33	chr9:12329000-12329600	Flanking Active TSS	Pancreas	Pancrea
34	chr9:12329000-12329600	Active TSS	HepG2	liver
35	chr9:12329200-12329400	Enhancers	iPS-20b Cell Line	embryonic stem cell
36	chr9:12329200-12329400	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
37	chr9:12329200-12329600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr9:12329200-12329600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr9:12329200-12329600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr9:12329200-12329600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr9:12329200-12329600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr9:12329200-12329600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr9:12329200-12329600	Flanking Active TSS	Adipose Nuclei	Adipose
44	chr9:12329200-12329600	Active TSS	Brain Angular Gyrus	brain
45	chr9:12329200-12329600	Active TSS	Brain Cingulate Gyrus	brain
46	chr9:12329200-12329600	Active TSS	Brain Hippocampus Middle	brain
47	chr9:12329200-12329600	Active TSS	Brain Inferior Temporal Lobe	brain
48	chr9:12329200-12329600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
49	chr9:12329200-12329600	Active TSS	Brain Substantia Nigra	brain
50	chr9:12329200-12329600	Active TSS	Fetal Kidney	kidney

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