Variant report

Variant	nsv869676
Chromosome Location	chr15:43895704-44016490
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr15:43937824-43938301	GM12878	blood:	n/a	n/a
2	ATF2	chr15:43930649-43931067	GM12878	blood:	n/a	n/a
3	ATF2	chr15:43937873-43938217	GM12878	blood:	n/a	n/a
4	BATF	chr15:43931144-43931498	GM12878	blood:	n/a	n/a
5	BATF	chr15:43937914-43938101	GM12878	blood:	n/a	n/a
6	BATF	chr15:43982183-43982550	GM12878	blood:	n/a	n/a
7	BATF	chr15:43937842-43938114	GM12878	blood:	n/a	n/a
8	BATF	chr15:43931124-43931473	GM12878	blood:	n/a	n/a
9	BATF	chr15:43930739-43931096	GM12878	blood:	n/a	n/a
10	BCL11A	chr15:43930706-43930979	GM12878	blood:	n/a	n/a
11	BCL11A	chr15:43982262-43982477	GM12878	blood:	n/a	n/a
12	BCL11A	chr15:43930652-43931058	GM12878	blood:	n/a	chr15:43930990-43930999
13	BCL11A	chr15:43938810-43938992	GM12878	blood:	n/a	n/a
14	BCL11A	chr15:43938746-43939054	GM12878	blood:	n/a	n/a
15	BCL3	chr15:44013070-44013288	GM12878	blood:	n/a	n/a
16	BCLAF1	chr15:43930701-43931083	GM12878	blood:	n/a	chr15:43930990-43930999
17	BHLHE40	chr15:43939045-43939348	GM12878	blood:	n/a	n/a
18	CBX3	chr15:43982182-43982556	K562	blood:	n/a	n/a
19	CBX3	chr15:43985411-43986004	K562	blood:	n/a	n/a
20	CBX3	chr15:43982138-43982749	K562	blood:	n/a	chr15:43982622-43982633
21	CEBPB	chr15:44013009-44013290	K562	blood:	n/a	chr15:44013128-44013139
22	CEBPB	chr15:44013072-44013307	A549	lung:	n/a	chr15:44013128-44013139
23	CEBPB	chr15:43913566-43913782	HepG2	liver:	n/a	chr15:43913662-43913673
24	CEBPB	chr15:43933839-43934039	K562	blood:	n/a	n/a
25	CEBPB	chr15:44013108-44013199	IMR90	lung:	n/a	chr15:44013128-44013139
26	CEBPB	chr15:43982162-43982682	GM12878	blood:	n/a	n/a
27	CEBPB	chr15:43913554-43913750	K562	blood:	n/a	chr15:43913662-43913673
28	CEBPB	chr15:43933963-43933971	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr15:44013006-44013314	HepG2	liver:	n/a	chr15:44013128-44013139
30	CEBPB	chr15:43914526-43914540	Hela-S3	cervix:	n/a	n/a
31	CEBPD	chr15:43962726-43963199	K562	blood:	n/a	n/a
32	CHD2	chr15:43931127-43931189	GM12878	blood:	n/a	n/a
33	CTCF	chr15:43982191-43982525	Gliobla	brain:	n/a	chr15:43982357-43982373 chr15:43982356-43982374 chr15:43982362-43982371 chr15:43982351-43982372 chr15:43982228-43982236
34	CTCF	chr15:43982165-43982167	H1-hESC	embryonic stem cell:	n/a	n/a
35	CTCF	chr15:43941291-43941401	GM12892	blood:	n/a	n/a
36	CTCF	chr15:43982193-43982515	GM19240	blood:	n/a	chr15:43982357-43982373 chr15:43982356-43982374 chr15:43982362-43982371 chr15:43982351-43982372 chr15:43982228-43982236
37	CTCF	chr15:43903572-43903813	K562	blood:	n/a	n/a
38	CTCF	chr15:43941945-43942043	GM20000	blood:	n/a	n/a
39	CTCF	chr15:43938709-43938821	Lung_OC	lung:	n/a	n/a
40	CTCF	chr15:43982088-43982521	GM12892	blood:	n/a	chr15:43982357-43982373 chr15:43982356-43982374 chr15:43982362-43982371 chr15:43982351-43982372 chr15:43982228-43982236
41	CTCF	chr15:43985780-43985794	Kidney_OC	kidney:	n/a	n/a
42	CTCF	chr15:43903672-43903694	Hela-S3	cervix:	n/a	n/a
43	CTCF	chr15:43981939-43982021	GM12891	blood:	n/a	n/a
44	CTCF	chr15:43941306-43941392	MCF-7	breast:	n/a	n/a
45	CTCF	chr15:43982148-43982551	A549	lung:	n/a	chr15:43982357-43982373 chr15:43982356-43982374 chr15:43982362-43982371 chr15:43982351-43982372 chr15:43982228-43982236
46	CTCF	chr15:43903637-43903732	GM12892	blood:	n/a	n/a
47	CTCF	chr15:43982221-43982517	HUVEC	blood vessel:	n/a	chr15:43982357-43982373 chr15:43982356-43982374 chr15:43982362-43982371 chr15:43982351-43982372 chr15:43982228-43982236
48	CTCF	chr15:43982191-43982515	Fibrobl	skin:	n/a	chr15:43982357-43982373 chr15:43982356-43982374 chr15:43982362-43982371 chr15:43982351-43982372 chr15:43982228-43982236
49	CTCF	chr15:43982198-43982498	MCF-7	breast:	n/a	chr15:43982357-43982373 chr15:43982356-43982374 chr15:43982362-43982371 chr15:43982351-43982372 chr15:43982228-43982236
50	CTCF	chr15:43982161-43982505	K562	blood:	n/a	chr15:43982357-43982373 chr15:43982356-43982374 chr15:43982362-43982371 chr15:43982351-43982372 chr15:43982228-43982236

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:43941034-43941084	PrEC	prostate:	n/a
2	chr15:43941034-43941084	PrEC	prostate:	n/a
3	chr15:43912221-43912271	IMR90	lung:	fetal
4	chr15:43989074-43989124	LNCaP	prostate:	n/a
5	chr15:43941563-43941613	HEEpiC	esophagus:	n/a
6	chr15:43941042-43941092	BJ	skin:	n/a
7	chr15:43991375-43991425	CMK	blood:	n/a
8	chr15:43912221-43912271	LNCaP	prostate:	n/a
9	chr15:43937339-43937389	LNCaP	prostate:	n/a
10	chr15:43989074-43989124	HRCEpiC	kidney:	n/a
11	chr15:43912221-43912271	HAEpiC	amniotic membrane:	n/a
12	chr15:43984922-43984972	GM12892	blood:	n/a
13	chr15:43941042-43941092	BE2_C	brain:	n/a
14	chr15:43931742-43931792	LNCaP	prostate:	n/a
15	chr15:43940867-43940917	A549	lung:	n/a
16	chr15:43989074-43989124	AG09319	gingival:	n/a
17	chr15:43991375-43991425	Hela-S3	cervix:	n/a
18	chr15:43912221-43912271	CMK	blood:	n/a
19	chr15:43989074-43989124	ovcar-3	ovarian:	n/a
20	chr15:43941642-43941692	K562	blood:	n/a
21	chr15:43941871-43941921	GM19239	blood:	n/a
22	chr15:43942440-43942490	HRPEpiC	eye:	n/a
23	chr15:43941407-43941457	AG09319	gingival:	n/a
24	chr15:43940867-43940917	PANC-1	pancreas:	n/a
25	chr15:43941563-43941613	AG04450	lung:	fetal
26	chr15:43941563-43941613	H1-hESC	embryonic stem cell:	embryo
27	chr15:43989074-43989124	AoSMC	blood vessel:	n/a
28	chr15:43912221-43912271	GM06990	blood:	n/a
29	chr15:43941563-43941613	Jurkat	blood:	n/a
30	chr15:43940867-43940917	HMEC	breast:	n/a
31	chr15:43941034-43941084	HepG2	liver:	n/a
32	chr15:43983306-43983356	SKMC	muscle:	n/a
33	chr15:43991375-43991425	HCPEpiC	choroid plexus:	n/a
34	chr15:43940140-43940190	HEEpiC	esophagus:	n/a
35	chr15:43941563-43941613	BE2_C	brain:	n/a
36	chr15:43942014-43942064	MCF10A-Er-Src	breast:	n/a
37	chr15:43912221-43912271	PrEC	prostate:	n/a
38	chr15:43940867-43940917	GM12892	blood:	n/a
39	chr15:43941407-43941457	HEK293	kidney:	embryo
40	chr15:43941871-43941921	HNPCEpiC	eye:	n/a
41	chr15:43941563-43941613	AG10803	skin:	n/a
42	chr15:43989074-43989124	H1-hESC	embryonic stem cell:	embryo
43	chr15:43991375-43991425	GM12892	blood:	n/a
44	chr15:43941407-43941457	AG09309	skin:	n/a
45	chr15:43941407-43941457	NH-A	brain:	n/a
46	chr15:43983306-43983356	CMK	blood:	n/a
47	chr15:43989074-43989124	HEEpiC	esophagus:	n/a
48	chr15:43983306-43983356	HMEC	breast:	n/a
49	chr15:43941034-43941084	AoSMC	blood vessel:	n/a
50	chr15:43941072-43941122	HL-60	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	15:43889977-43895899..15:44001645-44015047	GM12878	blood:
2	15:43889977-43895899..15:44001645-44015047	GM12878	blood:
3	15:43782117-43785993..15:44015129-44020909	GM12878	blood:
4	15:44001645-44015047..15:44080886-44089111	Hela-S3	cervix:
5	15:43916541-43924442..15:44080886-44089111	GM12878	blood:
6	chr15:43946007..43947781-chr15:43949371..43952173,2	K562	blood:
7	15:43782117-43785993..15:44001645-44015047	GM12878	blood:
8	15:43802874-43806906..15:44001645-44015047	Hela-S3	cervix:
9	chr15:43821060..43823469-chr15:43995355..43996867,2	K562	blood:
10	15:43924442-43930824..15:44001645-44015047	GM12878	blood:
11	15:43916541-43924442..15:44034348-44042259	K562	blood:
12	15:43792489-43802874..15:43916541-43924442	Hela-S3	cervix:
13	15:43924442-43930824..15:44001645-44015047	GM12878	blood:
14	15:43807815-43812531..15:44001645-44015047	Hela-S3	cervix:
15	15:43792489-43802874..15:44001645-44015047	GM12878	blood:
16	chr15:43946007..43947781-chr15:43949371..43952173,2	K562	blood:
17	15:43792489-43802874..15:44015129-44020909	GM12878	blood:
18	15:43782117-43785993..15:43931042-43936532	GM12878	blood:
19	15:43924442-43930824..15:44015129-44020909	GM12878	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MAP1A-1	chr15:43896982-43897099	ENSG00000240430.1
2	lnc-TP53BP1-5	chr15:43924469-43924561	NONHSAT042101
3	lnc-TP53BP1-5	chr15:43924915-43925417	NONHSAT042101

Variant related genes	Relation type
RNU6-353P	TF binding region
CATSPER2	TF binding region
ENSG00000238494	TF binding region
PDIA3P2	TF binding region
STRC	TF binding region
RNU6-610P	TF binding region
CKMT1A	TF binding region
STRCP1	TF binding region
ENSG00000249839	TF binding region
ENSG00000238535	TF binding region
RNU6-353P	CpG island
CATSPER2	CpG island
ENSG00000238494	CpG island
PDIA3P2	CpG island
STRC	CpG island
RNU6-610P	CpG island
CKMT1A	CpG island
STRCP1	CpG island
ENSG00000249839	CpG island
ENSG00000238535	CpG island
ENSG00000205771	chromatin interactions
ENSG00000166963	chromatin interactions
ENSG00000167004	chromatin interactions
ENSG00000166763	chromatin interactions
ENSG00000206991	chromatin interactions
ENSG00000067369	chromatin interactions
ENSG00000140264	chromatin interactions
ENSG00000222398	chromatin interactions
ENSG00000221792	chromatin interactions
ENSG00000237289	chromatin interactions
ENSG00000242028	chromatin interactions
ENSG00000238494	chromatin interactions
ENSG00000242866	chromatin interactions
ENSG00000166762	chromatin interactions

Extended variants
information (count: 2668 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:2668 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs571479180	chr15:43895714-43895715	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs546477870	chr15:43895729-43895730	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs539909292	chr15:43895737-43895738	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs141300494	chr15:43895810-43895811	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs370837733	chr15:43895843-43895844	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs576509550	chr15:43895853-43895854	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs188929259	chr15:43895859-43895860	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs555773661	chr15:43895893-43895894	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs193121356	chr15:43895904-43895905	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs376266158	chr15:43895944-43895945	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs145040278	chr15:43895954-43895955	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs533369657	chr15:43895967-43895968	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs543636241	chr15:43895977-43895978	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs563218239	chr15:43896030-43896031	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs529022050	chr15:43896031-43896032	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs371868130	chr15:43896186-43896187	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs374974955	chr15:43896195-43896196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs140238012	chr15:43896230-43896231	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs528109581	chr15:43896263-43896264	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs202189597	chr15:43896271-43896272	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs185800736	chr15:43896275-43896276	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs145658933	chr15:43896288-43896289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs138821063	chr15:43896306-43896307	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs140545217	chr15:43896309-43896310	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs373116749	chr15:43896348-43896349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs376047430	chr15:43896377-43896378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs2614818	chr15:43896414-43896415	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs537221720	chr15:43896435-43896436	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs192265557	chr15:43896440-43896441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs2614819	chr15:43896446-43896447	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs570044680	chr15:43896448-43896449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs2470136	chr15:43896482-43896483	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs535994338	chr15:43896491-43896492	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs529043400	chr15:43896493-43896494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs572418097	chr15:43896520-43896521	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs541294775	chr15:43896549-43896550	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs371513959	chr15:43896582-43896583	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs558005208	chr15:43896605-43896606	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs376104748	chr15:43896606-43896607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs377674360	chr15:43896620-43896621	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs563952879	chr15:43896658-43896659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs573606373	chr15:43896670-43896671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs542717773	chr15:43896728-43896729	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs559052939	chr15:43896734-43896735	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs150396823	chr15:43896735-43896736	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs183973715	chr15:43896744-43896745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs2614820	chr15:43896750-43896751	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs2614821	chr15:43896760-43896761	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs565165728	chr15:43896764-43896765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs2614822	chr15:43896798-43896799	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:65)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	21129771	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21045282	CNVD
Breast cancer	22032731	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Mental retardation	17124404	CNVD
Schizophrenia	23813976	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:279 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:43871400-43898000	Weak transcription	Gastric	stomach
2	chr15:43891600-43896600	Weak transcription	Duodenum Mucosa	Duodenum
3	chr15:43893000-43897200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr15:43913400-43914400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr15:43914000-43914400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr15:43914200-43914600	Enhancers	Fetal Intestine Small	intestine
7	chr15:43914600-43937400	Weak transcription	Fetal Intestine Small	intestine
8	chr15:43915000-43915400	Enhancers	Hela-S3	cervix
9	chr15:43915400-43941000	Weak transcription	Hela-S3	cervix
10	chr15:43917000-43918000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr15:43917200-43917800	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr15:43917400-43918000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr15:43917600-43917800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr15:43919600-43941600	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr15:43920400-43941400	Weak transcription	Brain Hippocampus Middle	brain
16	chr15:43921000-43940600	Weak transcription	Gastric	stomach
17	chr15:43921400-43950400	Weak transcription	Aorta	Aorta
18	chr15:43921800-43952600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr15:43922200-43922600	Enhancers	Placenta	Placenta
20	chr15:43922800-43937600	Weak transcription	Fetal Intestine Large	intestine
21	chr15:43923200-43937400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr15:43923200-43951800	Weak transcription	Brain Inferior Temporal Lobe	brain
23	chr15:43924200-43924800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr15:43925200-43939200	Weak transcription	Brain Angular Gyrus	brain
25	chr15:43925200-43939800	Weak transcription	Brain Anterior Caudate	brain
26	chr15:43929600-43940200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr15:43929800-43937600	Weak transcription	Skeletal Muscle Male	skeletal muscle
28	chr15:43930200-43930800	Enhancers	GM12878-XiMat	blood
29	chr15:43930600-43931200	Enhancers	Left Ventricle	heart
30	chr15:43930800-43931400	Flanking Active TSS	GM12878-XiMat	blood
31	chr15:43931000-43931200	Enhancers	Duodenum Smooth Muscle	Duodenum
32	chr15:43931000-43931400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr15:43931000-43931400	Enhancers	Duodenum Mucosa	Duodenum
34	chr15:43931200-43931400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr15:43931200-43943600	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr15:43931200-43952000	Weak transcription	Rectal Mucosa Donor 29	rectum
37	chr15:43931200-43952600	Weak transcription	Left Ventricle	heart
38	chr15:43931400-43939000	Weak transcription	Duodenum Mucosa	Duodenum
39	chr15:43931400-43942400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
40	chr15:43932800-43943600	Weak transcription	NHEK	skin
41	chr15:43933800-43941000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr15:43934200-43939200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr15:43934200-43939600	Weak transcription	Lung	lung
44	chr15:43934200-43940200	Weak transcription	Skeletal Muscle Female	skeletal muscle
45	chr15:43934200-43941400	Weak transcription	Fetal Stomach	stomach
46	chr15:43934200-43941600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr15:43935200-43942200	Weak transcription	Esophagus	oesophagus
48	chr15:43935400-43943200	Weak transcription	Ovary	ovary
49	chr15:43935800-43937400	Weak transcription	Brain Cingulate Gyrus	brain
50	chr15:43935800-43938200	Weak transcription	Stomach Smooth Muscle	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links