Variant report

Variant	nsv869701
Chromosome Location	chr11:3879297-3973762
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1739)
CpG islands
(count:549)
Chromatin interactive
region (count:90)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1739 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:3901140-3901652	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:3935042-3935565	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:3903969-3904188	K562	blood:	n/a	n/a
4	ARID3A	chr11:3963620-3964681	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:3899626-3900158	K562	blood:	n/a	n/a
6	ARID3A	chr11:3936183-3936306	K562	blood:	n/a	n/a
7	ARID3A	chr11:3926509-3927035	HepG2	liver:	n/a	n/a
8	ARID3A	chr11:3954317-3954983	HepG2	liver:	n/a	n/a
9	ARID3A	chr11:3901986-3902290	HepG2	liver:	n/a	n/a
10	ARID3A	chr11:3888567-3889552	K562	blood:	n/a	n/a
11	ARID3A	chr11:3881380-3881519	HepG2	liver:	n/a	n/a
12	ARID3A	chr11:3937306-3937641	HepG2	liver:	n/a	n/a
13	ARID3A	chr11:3941374-3941706	K562	blood:	n/a	n/a
14	ARID3A	chr11:3886662-3886675	K562	blood:	n/a	n/a
15	ARID3A	chr11:3888130-3888624	HepG2	liver:	n/a	n/a
16	ARID3A	chr11:3880659-3881511	K562	blood:	n/a	n/a
17	ARID3A	chr11:3913578-3913638	K562	blood:	n/a	n/a
18	ARID3A	chr11:3898691-3899153	HepG2	liver:	n/a	n/a
19	ATF1	chr11:3888442-3889323	K562	blood:	n/a	n/a
20	ATF1	chr11:3899823-3900218	K562	blood:	n/a	n/a
21	ATF1	chr11:3886834-3887792	K562	blood:	n/a	n/a
22	ATF1	chr11:3936155-3936404	K562	blood:	n/a	n/a
23	ATF1	chr11:3941341-3941668	K562	blood:	n/a	n/a
24	ATF1	chr11:3963575-3963897	K562	blood:	n/a	n/a
25	ATF1	chr11:3900635-3900850	K562	blood:	n/a	n/a
26	ATF1	chr11:3892477-3892821	K562	blood:	n/a	n/a
27	ATF1	chr11:3918014-3918032	K562	blood:	n/a	n/a
28	ATF2	chr11:3900493-3901414	GM12878	blood:	n/a	n/a
29	ATF2	chr11:3892427-3892886	GM12878	blood:	n/a	n/a
30	ATF2	chr11:3900477-3901207	GM12878	blood:	n/a	n/a
31	ATF2	chr11:3915215-3915773	GM12878	blood:	n/a	n/a
32	ATF2	chr11:3888312-3888862	GM12878	blood:	n/a	n/a
33	ATF2	chr11:3915271-3915923	GM12878	blood:	n/a	n/a
34	ATF2	chr11:3968153-3968697	GM12878	blood:	n/a	n/a
35	ATF2	chr11:3941225-3941691	GM12878	blood:	n/a	n/a
36	ATF3	chr11:3887026-3887391	K562	blood:	n/a	n/a
37	ATF3	chr11:3941328-3941540	K562	blood:	n/a	n/a
38	ATF3	chr11:3941346-3941692	K562	blood:	n/a	n/a
39	BACH1	chr11:3879632-3879643	K562	blood:	n/a	n/a
40	BACH1	chr11:3971565-3971765	H1-hESC	embryonic stem cell:	n/a	n/a
41	BACH1	chr11:3971505-3971849	K562	blood:	n/a	n/a
42	BATF	chr11:3915316-3915859	GM12878	blood:	n/a	chr11:3915842-3915852
43	BATF	chr11:3899095-3899569	GM12878	blood:	n/a	n/a
44	BATF	chr11:3941314-3941593	GM12878	blood:	n/a	chr11:3941471-3941482
45	BATF	chr11:3900603-3901181	GM12878	blood:	n/a	n/a
46	BATF	chr11:3900739-3901144	GM12878	blood:	n/a	n/a
47	BCL11A	chr11:3915359-3915879	GM12878	blood:	n/a	n/a
48	BCL11A	chr11:3900539-3901118	GM12878	blood:	n/a	chr11:3900660-3900669
49	BCL11A	chr11:3912048-3912291	GM12878	blood:	n/a	n/a
50	BCL11A	chr11:3894943-3895296	GM12878	blood:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:3915742-3915792	HPAEpiC	pulmonary alveolar:	n/a
2	chr11:3887906-3887956	AG09319	gingival:	n/a
3	chr11:3901552-3901602	HRPEpiC	eye:	n/a
4	chr11:3972838-3972888	AoSMC	blood vessel:	n/a
5	chr11:3915742-3915792	AG09309	skin:	n/a
6	chr11:3899234-3899284	AG04449	skin:	fetal
7	chr11:3972838-3972888	SK-N-MC	brain:	n/a
8	chr11:3926837-3926887	PFSK-1	brain:	n/a
9	chr11:3950928-3950978	HCF	heart:	n/a
10	chr11:3950928-3950978	T-47D	breast:	n/a
11	chr11:3880668-3880718	U87	brain:	n/a
12	chr11:3972838-3972888	PrEC	prostate:	n/a
13	chr11:3887906-3887956	RPTEC	kidney:	n/a
14	chr11:3901552-3901602	NHBE	bronchial:	n/a
15	chr11:3972838-3972888	Caco-2	colon:	n/a
16	chr11:3926837-3926887	GM12892	blood:	n/a
17	chr11:3950928-3950978	SKMC	muscle:	n/a
18	chr11:3950928-3950978	AG04450	lung:	fetal
19	chr11:3901552-3901602	AG04450	lung:	fetal
20	chr11:3899234-3899284	BE2_C	brain:	n/a
21	chr11:3926837-3926887	AG09319	gingival:	n/a
22	chr11:3901552-3901602	GM19239	blood:	n/a
23	chr11:3899234-3899284	GM12891	blood:	n/a
24	chr11:3915742-3915792	GM12891	blood:	n/a
25	chr11:3961397-3961447	HUVEC	blood vessel:	n/a
26	chr11:3899234-3899284	HL-60	blood:	n/a
27	chr11:3961397-3961447	IMR90	lung:	fetal
28	chr11:3926837-3926887	SAEC	small airway:	n/a
29	chr11:3887906-3887956	SAEC	small airway:	n/a
30	chr11:3915742-3915792	SK-N-SH	brain:	n/a
31	chr11:3926837-3926887	AG10803	skin:	n/a
32	chr11:3926837-3926887	ProgFib	skin:	n/a
33	chr11:3899234-3899284	NHBE	bronchial:	n/a
34	chr11:3899234-3899284	GM06990	blood:	n/a
35	chr11:3950928-3950978	Hepatocyte	liver:	n/a
36	chr11:3901552-3901602	HNPCEpiC	eye:	n/a
37	chr11:3950928-3950978	NH-A	brain:	n/a
38	chr11:3915742-3915792	K562	blood:	n/a
39	chr11:3901552-3901602	NHDF-neo	bronchial:	n/a
40	chr11:3915742-3915792	SK-N-MC	brain:	n/a
41	chr11:3899234-3899284	MCF-7	breast:	n/a
42	chr11:3972838-3972888	SK-N-SH_RA	brain:	n/a
43	chr11:3915742-3915792	SAEC	small airway:	n/a
44	chr11:3961397-3961447	HepG2	liver:	n/a
45	chr11:3950928-3950978	Hela-S3	cervix:	n/a
46	chr11:3972838-3972888	HEK293	kidney:	embryo
47	chr11:3950928-3950978	HAEpiC	amniotic membrane:	n/a
48	chr11:3926837-3926887	HNPCEpiC	eye:	n/a
49	chr11:3926837-3926887	RPTEC	kidney:	n/a
50	chr11:3899234-3899284	NH-A	brain:	n/a

(count:90 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:3906664..3909533-chr11:3913263..3915649,2	K562	blood:
2	chr11:3898534..3901352-chr11:3914445..3916336,2	K562	blood:
3	chr11:3856186..3858258-chr11:3896154..3898858,2	K562	blood:
4	chr11:3959785..3962625-chr11:3963394..3965455,2	K562	blood:
5	chr11:3851375..3853538-chr11:3878671..3880501,2	K562	blood:
6	chr11:3924387..3926675-chr11:3928971..3931483,2	K562	blood:
7	chr11:3921286..3923795-chr11:3928569..3931190,3	K562	blood:
8	chr11:3972776..3975865-chr11:3976108..3980315,4	K562	blood:
9	chr11:3886946..3888803-chr11:3894440..3896951,3	K562	blood:
10	chr11:3880298..3882156-chr11:3929385..3931487,2	K562	blood:
11	chr11:3948392..3949376-chr11:4093449..4094397,2	MCF-7	breast:
12	chr11:3945769..3947956-chr11:3954532..3958241,3	K562	blood:
13	chr11:3875349..3877164-chr11:3894334..3897310,2	MCF-7	breast:
14	chr11:3895361..3897220-chr11:3900552..3902972,2	K562	blood:
15	chr11:3900708..3902267-chr11:3904917..3907387,2	K562	blood:
16	chr11:3924735..3926822-chr11:3929983..3932371,3	K562	blood:
17	chr11:3945861..3948795-chr11:3974406..3976438,2	K562	blood:
18	chr11:3973583..3975273-chr11:3982575..3984995,2	K562	blood:
19	chr11:3892574..3897220-chr11:3897647..3902052,8	K562	blood:
20	chr11:3889318..3891193-chr11:3903211..3907192,3	K562	blood:
21	chr11:3952774..3955430-chr11:3970846..3973149,2	K562	blood:
22	chr11:3860976..3863338-chr11:3950724..3953405,2	K562	blood:
23	chr11:3892544..3895447-chr11:3927385..3929992,2	K562	blood:
24	chr11:3875794..3876774-chr11:3900109..3901106,2	K562	blood:
25	chr11:3921286..3923795-chr11:3928569..3931190,3	K562	blood:
26	chr11:3906079..3908316-chr11:3988710..3990857,2	K562	blood:
27	chr11:3892574..3897220-chr11:3897647..3902052,8	K562	blood:
28	chr11:3946137..3948260-chr11:3950901..3953972,3	MCF-7	breast:
29	chr11:3880710..3882363-chr11:4111617..4114224,2	K562	blood:
30	chr11:3963150..3965730-chr11:3971154..3972718,2	K562	blood:
31	chr11:3884366..3885941-chr11:3894780..3897079,2	K562	blood:
32	chr11:3880021..3883743-chr11:3910117..3913050,3	K562	blood:
33	chr11:3898534..3901352-chr11:3914445..3916336,2	K562	blood:
34	chr11:3921286..3923395-chr11:3927925..3930069,2	K562	blood:
35	chr11:3900708..3902267-chr11:3904917..3907387,2	K562	blood:
36	chr11:3885887..3888606-chr11:3895839..3898545,2	MCF-7	breast:
37	chr11:3887269..3888830-chr11:3914209..3915922,2	K562	blood:
38	chr11:3929305..3931209-chr11:4016785..4019728,2	K562	blood:
39	chr11:3857978..3860215-chr11:3891494..3894175,2	K562	blood:
40	chr11:3899401..3901421-chr11:3909382..3911737,2	K562	blood:
41	chr11:3952774..3955430-chr11:3970846..3973149,2	K562	blood:
42	chr11:3880298..3882156-chr11:3929385..3931487,2	K562	blood:
43	chr11:3966514..3968687-chr11:3969725..3973118,3	K562	blood:
44	chr11:3906966..3908700-chr11:3915127..3916837,2	MCF-7	breast:
45	chr11:3898017..3898634-chr3:12542224..12542813,2	Hela-S3	cervix:
46	chr11:3895497..3897326-chr11:3928476..3930571,2	K562	blood:
47	chr11:3876409..3878027-chr11:3879355..3881248,2	MCF-7	breast:
48	chr11:3875167..3877402-chr11:3891084..3894016,3	K562	blood:
49	chr11:3941075..3946343-chr11:3946471..3949436,5	K562	blood:
50	chr11:3895497..3897326-chr11:3928476..3930571,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000228661	TF binding region
ENSG00000206976	TF binding region
STIM1	TF binding region
ENSG00000230593	TF binding region
ENSG00000228661	CpG island
ENSG00000206976	CpG island
STIM1	CpG island
ENSG00000230593	CpG island
ENSG00000206976	chromatin interactions
ENSG00000230593	chromatin interactions
ENSG00000148985	chromatin interactions
ENSG00000263421	chromatin interactions
ENSG00000228661	chromatin interactions
ENSG00000229368	chromatin interactions
ENSG00000177105	chromatin interactions
ENSG00000167323	chromatin interactions

Extended variants
information (count: 3611 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:3611 , 50 per page) page: 1 2 3 4 5 6 7 ... 73

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs556834824	chr11:3879331-3879332	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs184484304	chr11:3879370-3879371	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs543601134	chr11:3879371-3879372	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs535963854	chr11:3879388-3879389	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs370455770	chr11:3879464-3879465	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs66816129	chr11:3879472-3879473	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs200624504	chr11:3879476-3879477	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs372423825	chr11:3879477-3879478	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs201205375	chr11:3879478-3879479	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs386749942	chr11:3879482-3879483	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs200418690	chr11:3879483-3879484	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs200569273	chr11:3879484-3879485	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs527673731	chr11:3879486-3879487	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs113597940	chr11:3879489-3879490	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs547572493	chr11:3879504-3879505	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs187985922	chr11:3879530-3879531	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs543791407	chr11:3879549-3879550	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs549015851	chr11:3879564-3879565	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs575064735	chr11:3879736-3879737	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs150928424	chr11:3879792-3879793	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs576063555	chr11:3879816-3879817	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs562819472	chr11:3879865-3879866	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs34345859	chr11:3879868-3879869	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs374569515	chr11:3879871-3879872	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs538891073	chr11:3879915-3879916	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs183879785	chr11:3879927-3879928	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs572691218	chr11:3879972-3879973	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs142071905	chr11:3880012-3880013	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs61899394	chr11:3880061-3880062	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs145819726	chr11:3880159-3880160	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs564910210	chr11:3880165-3880166	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs576170920	chr11:3880245-3880246	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs527456235	chr11:3880307-3880308	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs189048427	chr11:3880363-3880364	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs370751860	chr11:3880375-3880376	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs34695906	chr11:3880384-3880385	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs12280056	chr11:3880414-3880415	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs566984106	chr11:3880425-3880426	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs181776058	chr11:3880497-3880498	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs74050916	chr11:3880498-3880499	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs113072062	chr11:3880521-3880522	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs529951554	chr11:3880532-3880533	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs185720659	chr11:3880536-3880537	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs560964030	chr11:3880600-3880601	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs143960388	chr11:3880616-3880617	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs531666789	chr11:3880644-3880645	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs535849473	chr11:3880729-3880730	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs549843415	chr11:3880730-3880731	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs190630829	chr11:3880913-3880914	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs532731574	chr11:3880914-3880915	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	19432969	CNVD
Alzheimer''s disease	17576883	CNVD
Long-qt syndrome	17576883	CNVD
Emphysema	19352772	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Chordoma	18071362	CNVD
Breast cancer	16608533	CNVD
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Myelofibrosis	22110671	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Neuroblastoma	21124317	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Schizophrenia	21399695	CNVD
Gastric cancer	16891809	CNVD
Cancer	17160897	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	20016488	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Neuroblastoma	18923524	CNVD

Chromatin state (count:3599 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:3877000-3879400	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
2	chr11:3877200-3879600	Flanking Active TSS	Primary B cells from cord blood	blood
3	chr11:3877200-3881200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr11:3877400-3879400	Flanking Active TSS	Adipose Nuclei	Adipose
5	chr11:3877400-3879800	Flanking Active TSS	Primary hematopoietic stem cells	blood
6	chr11:3877400-3881200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
7	chr11:3877400-3881200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
8	chr11:3877400-3881400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
9	chr11:3877400-3882600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
10	chr11:3877600-3879400	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
11	chr11:3877600-3879400	Flanking Active TSS	Rectal Smooth Muscle	rectum
12	chr11:3877600-3881200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr11:3877600-3881400	Flanking Active TSS	Fetal Thymus	thymus
14	chr11:3877600-3883800	Flanking Active TSS	Primary T cells from cord blood	blood
15	chr11:3877800-3879400	Flanking Active TSS	HepG2	liver
16	chr11:3877800-3879600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
17	chr11:3877800-3881200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
18	chr11:3877800-3881200	Flanking Active TSS	Dnd41	blood
19	chr11:3878000-3879400	Flanking Active TSS	HMEC	breast
20	chr11:3878000-3880200	Active TSS	Brain Inferior Temporal Lobe	brain
21	chr11:3878000-3881200	Enhancers	Brain Germinal Matrix	brain
22	chr11:3878000-3881200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
23	chr11:3878000-3881400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
24	chr11:3878000-3882400	Enhancers	Cortex derived primary cultured neurospheres	brain
25	chr11:3878000-3883000	Weak transcription	Fetal Intestine Large	intestine
26	chr11:3878000-3883200	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
27	chr11:3878000-3883200	Enhancers	Fetal Heart	heart
28	chr11:3878200-3879400	Enhancers	Muscle Satellite Cultured Cells	--
29	chr11:3878200-3879600	Weak transcription	Brain Substantia Nigra	brain
30	chr11:3878200-3879800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr11:3878200-3880000	Weak transcription	HSMMtube	muscle
32	chr11:3878200-3880400	Active TSS	Fetal Muscle Trunk	muscle
33	chr11:3878200-3880400	Enhancers	Small Intestine	intestine
34	chr11:3878200-3880400	Weak transcription	NH-A	brain
35	chr11:3878200-3880600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
36	chr11:3878200-3880600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr11:3878200-3880600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr11:3878200-3880600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr11:3878200-3880600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr11:3878200-3880600	Enhancers	Brain Cingulate Gyrus	brain
41	chr11:3878200-3880600	Enhancers	Stomach Mucosa	stomach
42	chr11:3878200-3880600	Weak transcription	HSMM	muscle
43	chr11:3878200-3881000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
44	chr11:3878200-3881200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr11:3878200-3881200	Enhancers	Placenta	Placenta
46	chr11:3878200-3881200	Enhancers	Gastric	stomach
47	chr11:3878200-3881200	Enhancers	Pancreas	Pancrea
48	chr11:3878200-3881200	Enhancers	Spleen	Spleen
49	chr11:3878200-3886800	Weak transcription	NHLF	lung
50	chr11:3878400-3879400	Enhancers	Fetal Brain Female	brain

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