Variant report

Variant	nsv870352
Chromosome Location	chr12:105557770-105589263
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:105563565-105563865	K562	blood:	n/a	n/a
2	ARID3A	chr12:105570892-105571135	K562	blood:	n/a	n/a
3	ATF1	chr12:105563849-105564049	K562	blood:	n/a	n/a
4	BHLHE40	chr12:105569572-105569581	K562	blood:	n/a	n/a
5	CCNT2	chr12:105569446-105569721	K562	blood:	n/a	n/a
6	CEBPB	chr12:105583170-105583490	A549	lung:	n/a	chr12:105583291-105583304 chr12:105583291-105583302 chr12:105583336-105583347
7	CEBPB	chr12:105583133-105583451	K562	blood:	n/a	chr12:105583291-105583304 chr12:105583291-105583302 chr12:105583336-105583347
8	CEBPB	chr12:105560550-105560913	A549	lung:	n/a	chr12:105560732-105560743 chr12:105560697-105560708
9	CEBPB	chr12:105560586-105560849	Hela-S3	cervix:	n/a	chr12:105560732-105560743 chr12:105560697-105560708
10	CEBPB	chr12:105560565-105560867	HepG2	liver:	n/a	chr12:105560732-105560743 chr12:105560697-105560708
11	CEBPB	chr12:105560603-105560787	K562	blood:	n/a	chr12:105560732-105560743 chr12:105560697-105560708
12	CEBPB	chr12:105583150-105583436	HepG2	liver:	n/a	chr12:105583291-105583304 chr12:105583291-105583302 chr12:105583336-105583347
13	CEBPB	chr12:105560521-105560906	IMR90	lung:	n/a	chr12:105560542-105560553 chr12:105560732-105560743 chr12:105560697-105560708
14	CEBPB	chr12:105588806-105589113	HepG2	liver:	n/a	chr12:105588959-105588970
15	CEBPB	chr12:105583165-105583469	IMR90	lung:	n/a	chr12:105583291-105583304 chr12:105583291-105583302 chr12:105583336-105583347
16	CHD1	chr12:105560355-105560374	GM12878	blood:	n/a	n/a
17	CTCF	chr12:105585348-105585426	GM20000	blood:	n/a	n/a
18	CTCF	chr12:105584420-105584570	GM12874	blood:	n/a	n/a
19	CTCF	chr12:105569560-105569710	GM12874	blood:	n/a	chr12:105569664-105569673
20	CUX1	chr12:105565017-105565184	K562	blood:	n/a	n/a
21	CUX1	chr12:105565609-105565869	K562	blood:	n/a	n/a
22	CUX1	chr12:105570786-105570798	GM12878	blood:	n/a	n/a
23	E2F4	chr12:105580643-105580896	MCF10A-Er-Src	breast:	n/a	n/a
24	E2F4	chr12:105581152-105581338	MCF10A-Er-Src	breast:	n/a	n/a
25	EP300	chr12:105563862-105563913	K562	blood:	n/a	n/a
26	EP300	chr12:105569447-105569770	K562	blood:	n/a	chr12:105569550-105569559 chr12:105569687-105569696
27	FAM48A	chr12:105561594-105561625	GM12878	blood:	n/a	n/a
28	FOS	chr12:105560713-105560715	MCF10A-Er-Src	breast:	n/a	n/a
29	GATA1	chr12:105570721-105571503	PBDE	blood:	n/a	chr12:105571143-105571153
30	GATA1	chr12:105563348-105564178	PBDE	blood:	n/a	chr12:105564034-105564045
31	GATA1	chr12:105569135-105569866	K562	blood:	n/a	chr12:105569587-105569596 chr12:105569606-105569622 chr12:105569584-105569600 chr12:105569587-105569596 chr12:105569606-105569622 chr12:105569609-105569619 chr12:105569524-105569534 chr12:105569587-105569597 chr12:105569586-105569598
32	GATA1	chr12:105569147-105570255	PBDE	blood:	n/a	chr12:105569587-105569596 chr12:105569606-105569622 chr12:105569584-105569600 chr12:105569587-105569596 chr12:105569606-105569622 chr12:105569609-105569619 chr12:105569524-105569534 chr12:105569587-105569597 chr12:105569586-105569598
33	GATA2	chr12:105586678-105586982	SH-SY5Y	brain:	n/a	n/a
34	GATA3	chr12:105558565-105558773	SH-SY5Y	brain:	n/a	n/a
35	GATA3	chr12:105585251-105585494	SH-SY5Y	brain:	n/a	chr12:105585307-105585323 chr12:105585305-105585326 chr12:105585323-105585331
36	GATA3	chr12:105559705-105560159	SK-N-SH	brain:	n/a	n/a
37	IRF1	chr12:105569382-105569597	K562	blood:	n/a	n/a
38	IRF1	chr12:105563886-105564259	K562	blood:	n/a	n/a
39	JUND	chr12:105571131-105571184	K562	blood:	n/a	n/a
40	MAFF	chr12:105563914-105564498	HepG2	liver:	n/a	chr12:105564109-105564127 chr12:105564115-105564129
41	MAFF	chr12:105568153-105568162	K562	blood:	n/a	n/a
42	MAFF	chr12:105571143-105571221	K562	blood:	n/a	n/a
43	MAFF	chr12:105569239-105569505	K562	blood:	n/a	n/a
44	MAFF	chr12:105563889-105564564	K562	blood:	n/a	chr12:105564109-105564127 chr12:105564115-105564129
45	MAFF	chr12:105583100-105583400	K562	blood:	n/a	n/a
46	MAFK	chr12:105563928-105564522	IMR90	lung:	n/a	chr12:105564111-105564122 chr12:105564226-105564241 chr12:105564417-105564428 chr12:105564111-105564126 chr12:105564415-105564429 chr12:105564115-105564129 chr12:105564417-105564428 chr12:105564412-105564428 chr12:105564112-105564132 chr12:105564114-105564130
47	MAFK	chr12:105559968-105560152	IMR90	lung:	n/a	n/a
48	MAFK	chr12:105563927-105564574	HepG2	liver:	n/a	chr12:105564111-105564122 chr12:105564226-105564241 chr12:105564417-105564428 chr12:105564111-105564126 chr12:105564415-105564429 chr12:105564115-105564129 chr12:105564417-105564428 chr12:105564412-105564428 chr12:105564112-105564132 chr12:105564114-105564130
49	MAFK	chr12:105569261-105569532	HepG2	liver:	n/a	chr12:105569372-105569387
50	MAFK	chr12:105559920-105560165	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:105567515-105567565	BJ	skin:	n/a
2	chr12:105567515-105567565	IMR90	lung:	fetal
3	chr12:105567515-105567565	K562	blood:	n/a
4	chr12:105567515-105567565	MCF10A-Er-Src	breast:	n/a
5	chr12:105567515-105567565	HRCEpiC	kidney:	n/a
6	chr12:105567515-105567565	LNCaP	prostate:	n/a
7	chr12:105567515-105567565	NH-A	brain:	n/a
8	chr12:105567515-105567565	HMEC	breast:	n/a
9	chr12:105567515-105567565	AoSMC	blood vessel:	n/a
10	chr12:105567515-105567565	HepG2	liver:	n/a
11	chr12:105567515-105567565	HCT-116	colon:	n/a
12	chr12:105567515-105567565	HUVEC	blood vessel:	n/a
13	chr12:105567515-105567565	NHDF-neo	bronchial:	n/a
14	chr12:105567515-105567565	CMK	blood:	n/a
15	chr12:105567515-105567565	BE2_C	brain:	n/a
16	chr12:105567515-105567565	NT2-D1	testis:	n/a
17	chr12:105567515-105567565	HRPEpiC	eye:	n/a
18	chr12:105567515-105567565	SK-N-SH	brain:	n/a
19	chr12:105567515-105567565	GM12878	blood:	n/a
20	chr12:105567515-105567565	NHBE	bronchial:	n/a
21	chr12:105567515-105567565	HPAEpiC	pulmonary alveolar:	n/a
22	chr12:105567515-105567565	HCF	heart:	n/a
23	chr12:105567515-105567565	GM06990	blood:	n/a
24	chr12:105567515-105567565	HEK293	kidney:	embryo
25	chr12:105567515-105567565	SK-N-SH_RA	brain:	n/a
26	chr12:105567515-105567565	AG09309	skin:	n/a
27	chr12:105567515-105567565	ovcar-3	ovarian:	n/a
28	chr12:105567515-105567565	AG04449	skin:	fetal
29	chr12:105567515-105567565	Caco-2	colon:	n/a
30	chr12:105567515-105567565	Hepatocyte	liver:	n/a
31	chr12:105567515-105567565	AG09319	gingival:	n/a
32	chr12:105567515-105567565	SK-N-MC	brain:	n/a
33	chr12:105567515-105567565	H1-hESC	embryonic stem cell:	embryo
34	chr12:105567515-105567565	A549	lung:	n/a
35	chr12:105567515-105567565	AG10803	skin:	n/a
36	chr12:105567515-105567565	GM12892	blood:	n/a
37	chr12:105567515-105567565	PANC-1	pancreas:	n/a
38	chr12:105567515-105567565	ProgFib	skin:	n/a
39	chr12:105567515-105567565	HL-60	blood:	n/a
40	chr12:105567515-105567565	ECC-1	luminal epithelium:	n/a
41	chr12:105567515-105567565	RPTEC	kidney:	n/a
42	chr12:105567515-105567565	NB4	blood:	n/a
43	chr12:105567515-105567565	PrEC	prostate:	n/a
44	chr12:105567515-105567565	HCPEpiC	choroid plexus:	n/a
45	chr12:105567515-105567565	Hela-S3	cervix:	n/a
46	chr12:105567515-105567565	GM19239	blood:	n/a
47	chr12:105567515-105567565	HIPEpiC	eye:	n/a
48	chr12:105567515-105567565	Jurkat	blood:	n/a
49	chr12:105567515-105567565	HEEpiC	esophagus:	n/a
50	chr12:105567515-105567565	HCM	heart:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:105556392..105559099-chr12:105584648..105587108,2	K562	blood:
2	chr12:105561858..105564430-chr12:105566394..105568503,2	MCF-7	breast:
3	chr12:105557729..105562363-chr12:105563109..105566794,6	K562	blood:
4	chr12:105562609..105564624-chr12:105567516..105570192,2	K562	blood:
5	chr12:105557729..105562363-chr12:105563109..105566794,6	K562	blood:
6	chr12:105559645..105562741-chr12:105564536..105567836,4	K562	blood:
7	chr12:105564104..105568210-chr12:105569076..105573485,6	MCF-7	breast:
8	chr12:105558828..105561885-chr12:105562217..105566116,3	MCF-7	breast:
9	chr12:105558828..105561885-chr12:105562217..105566116,3	MCF-7	breast:
10	chr12:105564992..105569001-chr12:105627432..105630831,3	K562	blood:
11	chr12:105561858..105564430-chr12:105566394..105568503,2	MCF-7	breast:
12	chr12:105570915..105572891-chr12:105579294..105581496,2	K562	blood:
13	chr12:105585594..105587866-chr12:105590129..105592324,2	MCF-7	breast:
14	chr12:105586360..105589934-chr12:105601343..105605180,3	MCF-7	breast:
15	chr12:105558800..105560574-chr12:105563274..105565679,2	MCF-7	breast:
16	chr12:105559645..105562741-chr12:105564536..105567836,4	K562	blood:
17	chr12:105558800..105560574-chr12:105563274..105565679,2	MCF-7	breast:

Variant related genes	Relation type
APPL2	TF binding region
APPL2	CpG island
ENSG00000136044	chromatin interactions
ENSG00000136051	chromatin interactions
ENSG00000235162	chromatin interactions

Extended variants
information (count: 1309 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:1309 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376871440	chr12:105557843-105557844	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs182711801	chr12:105557864-105557865	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs372604617	chr12:105557881-105557882	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs375932805	chr12:105557908-105557909	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs369824204	chr12:105557916-105557917	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs373978329	chr12:105557924-105557925	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs376137196	chr12:105557998-105557999	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs537089931	chr12:105558007-105558008	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs113168943	chr12:105558017-105558018	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs143138958	chr12:105558019-105558020	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs61733563	chr12:105558037-105558038	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs61733561	chr12:105558038-105558039	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs372691974	chr12:105558039-105558040	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs375960032	chr12:105558042-105558043	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs370891573	chr12:105558063-105558064	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs373651225	chr12:105558089-105558090	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs553795130	chr12:105558090-105558091	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs576819795	chr12:105558124-105558125	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs568627356	chr12:105558126-105558127	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs201534659	chr12:105558162-105558163	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs536169135	chr12:105558176-105558177	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs150846766	chr12:105558207-105558208	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs556430097	chr12:105558273-105558274	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs183021903	chr12:105558274-105558275	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs554052043	chr12:105558275-105558276	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs572636416	chr12:105558308-105558309	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs146551772	chr12:105558325-105558326	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs541643499	chr12:105558332-105558333	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs572025152	chr12:105558333-105558334	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs143978580	chr12:105558334-105558335	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs367792203	chr12:105558410-105558411	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs371013220	chr12:105558471-105558472	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs199807811	chr12:105558483-105558484	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs200172761	chr12:105558484-105558485	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs368191809	chr12:105558547-105558548	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs117460788	chr12:105558566-105558567	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs574574526	chr12:105558601-105558602	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs188720075	chr12:105558623-105558624	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs117256370	chr12:105558633-105558634	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs532551191	chr12:105558728-105558729	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs369147745	chr12:105558758-105558759	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs58297772	chr12:105558791-105558792	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs58663296	chr12:105558793-105558794	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs73395783	chr12:105558830-105558831	Strong transcription Weak transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs193283371	chr12:105558882-105558883	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs139366712	chr12:105558952-105558953	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs377433663	chr12:105558987-105558988	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs568711917	chr12:105558998-105558999	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs545940014	chr12:105559009-105559010	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs150028411	chr12:105559057-105559058	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
small cell lung cancer	20016488	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21390271	CNVD
Cancer	20164919	CNVD
Breast cancer	22032731	CNVD
Cancer	16751803	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Wilms tumour	21544195	CNVD
Ovarian cancer	21720365	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17603634	CNVD
Breast cancer	16397240	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Sudden cardiac death	19188705	CNVD
Breast cancer	17133270	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Neurocytoma	17123091	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21364760	CNVD
Multiple myeloma	16616336	CNVD
Myelofibrosis	22110671	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:919 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:105505200-105559800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr12:105505200-105564000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr12:105505200-105567400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr12:105505200-105573000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr12:105505600-105573200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr12:105505800-105571400	Strong transcription	Rectal Mucosa Donor 31	rectum
7	chr12:105506400-105573000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr12:105506800-105568800	Strong transcription	Dnd41	blood
9	chr12:105506800-105572400	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr12:105507000-105573200	Strong transcription	Monocytes-CD14+_RO01746	blood
11	chr12:105507200-105571400	Strong transcription	Primary B cells from peripheral blood	blood
12	chr12:105507400-105565600	Strong transcription	Rectal Mucosa Donor 29	rectum
13	chr12:105507600-105571400	Strong transcription	HUVEC	blood vessel
14	chr12:105507600-105572800	Strong transcription	HUES6 Cell Line	embryonic stem cell
15	chr12:105507800-105563800	Strong transcription	Primary T helper cells fromperipheralblood	blood
16	chr12:105507800-105573200	Strong transcription	Placenta	Placenta
17	chr12:105508000-105565400	Strong transcription	Adipose Nuclei	Adipose
18	chr12:105508200-105572800	Strong transcription	Primary neutrophils fromperipheralblood	blood
19	chr12:105508400-105562000	Strong transcription	Primary B cells from cord blood	blood
20	chr12:105508600-105573000	Strong transcription	HUES64 Cell Line	embryonic stem cell
21	chr12:105508800-105565000	Strong transcription	Liver	Liver
22	chr12:105510000-105565200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr12:105513800-105567800	Weak transcription	Pancreas	Pancrea
24	chr12:105518600-105573200	Strong transcription	HSMM	muscle
25	chr12:105519400-105558400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
26	chr12:105522600-105586000	Weak transcription	Stomach Mucosa	stomach
27	chr12:105524600-105578200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr12:105525400-105583200	Weak transcription	Fetal Heart	heart
29	chr12:105527200-105565400	Strong transcription	Primary T helper cells PMA-I stimulated	--
30	chr12:105529800-105571400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr12:105532400-105577800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr12:105533200-105565200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr12:105537400-105559600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr12:105537400-105560400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr12:105539800-105565800	Strong transcription	Osteobl	bone
36	chr12:105542200-105557800	Weak transcription	K562	blood
37	chr12:105543800-105561600	Strong transcription	Fetal Thymus	thymus
38	chr12:105545200-105557800	Weak transcription	Aorta	Aorta
39	chr12:105545400-105558800	Strong transcription	NHDF-Ad	bronchial
40	chr12:105546600-105557800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr12:105546800-105625200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr12:105548600-105557800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
43	chr12:105549200-105567400	Weak transcription	Fetal Brain Male	brain
44	chr12:105549200-105567800	Weak transcription	Esophagus	oesophagus
45	chr12:105549800-105558000	Weak transcription	Colonic Mucosa	Colon
46	chr12:105549800-105567200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
47	chr12:105549800-105567200	Weak transcription	Brain Angular Gyrus	brain
48	chr12:105550000-105557800	Weak transcription	NHEK	skin
49	chr12:105550200-105557800	Weak transcription	Right Ventricle	heart
50	chr12:105550600-105561600	Strong transcription	Muscle Satellite Cultured Cells	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links