Variant report

Variant	nsv871224
Chromosome Location	chr1:98290577-98365310
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr1:98330283-98330429	H1-hESC	embryonic stem cell:	n/a	n/a
2	BATF	chr1:98314987-98315181	GM12878	blood:	n/a	n/a
3	BHLHE40	chr1:98293557-98293863	GM12878	blood:	n/a	n/a
4	BRCA1	chr1:98315427-98316172	Hela-S3	cervix:	n/a	n/a
5	CEBPB	chr1:98353733-98353979	IMR90	lung:	n/a	chr1:98353856-98353867
6	CEBPB	chr1:98319163-98319441	Hela-S3	cervix:	n/a	n/a
7	CEBPB	chr1:98299462-98299745	A549	lung:	n/a	chr1:98299621-98299632
8	CEBPB	chr1:98315355-98315986	HCT-116	colon:	n/a	chr1:98315683-98315694
9	CEBPB	chr1:98315515-98315882	A549	lung:	n/a	chr1:98315683-98315694
10	CEBPB	chr1:98299460-98299776	HepG2	liver:	n/a	chr1:98299621-98299632
11	CEBPB	chr1:98314085-98314371	HepG2	liver:	n/a	chr1:98314210-98314221
12	CEBPB	chr1:98315336-98316014	A549	lung:	n/a	chr1:98315683-98315694
13	CEBPB	chr1:98315460-98315887	A549	lung:	n/a	chr1:98315683-98315694
14	CEBPB	chr1:98353754-98353891	A549	lung:	n/a	chr1:98353856-98353867
15	CEBPB	chr1:98314089-98314389	Hela-S3	cervix:	n/a	chr1:98314210-98314221
16	CEBPB	chr1:98314149-98314250	H1-hESC	embryonic stem cell:	n/a	chr1:98314210-98314221
17	CEBPB	chr1:98338761-98339040	IMR90	lung:	n/a	chr1:98338884-98338895
18	CEBPB	chr1:98314113-98314377	A549	lung:	n/a	chr1:98314210-98314221
19	CEBPB	chr1:98315505-98315762	ECC-1	luminal epithelium:	n/a	chr1:98315683-98315694
20	CEBPB	chr1:98353680-98353978	HepG2	liver:	n/a	chr1:98353856-98353867
21	CEBPB	chr1:98315455-98315945	Hela-S3	cervix:	n/a	chr1:98315683-98315694
22	CEBPB	chr1:98315476-98315890	IMR90	lung:	n/a	chr1:98315683-98315694
23	CEBPB	chr1:98338769-98339043	HepG2	liver:	n/a	chr1:98338884-98338895
24	CEBPB	chr1:98315544-98315841	HCT-116	colon:	n/a	chr1:98315683-98315694
25	CEBPB	chr1:98314053-98314374	IMR90	lung:	n/a	chr1:98314210-98314221
26	CEBPB	chr1:98315505-98315889	MCF-7	breast:	n/a	chr1:98315683-98315694
27	CEBPB	chr1:98299523-98299768	IMR90	lung:	n/a	chr1:98299621-98299632
28	CHD2	chr1:98315502-98315865	Hela-S3	cervix:	n/a	n/a
29	CHD2	chr1:98293520-98293730	GM12878	blood:	n/a	n/a
30	CREB1	chr1:98293481-98293885	GM12878	blood:	n/a	n/a
31	CREB1	chr1:98293440-98293909	GM12878	blood:	n/a	n/a
32	CTCF	chr1:98330320-98330470	BE2_C	brain:	n/a	n/a
33	CTCF	chr1:98310820-98310970	GM12874	blood:	n/a	n/a
34	CTCF	chr1:98311504-98311571	Fibrobl	skin:	n/a	n/a
35	CTCF	chr1:98336279-98336382	HUVEC	blood vessel:	n/a	chr1:98336324-98336345
36	CTCF	chr1:98331831-98331880	GM20000	blood:	n/a	n/a
37	CTCF	chr1:98292540-98292690	BE2_C	brain:	n/a	n/a
38	CTCF	chr1:98336293-98336401	Hela-S3	cervix:	n/a	chr1:98336324-98336345
39	CUX1	chr1:98293505-98293890	GM12878	blood:	n/a	n/a
40	E2F4	chr1:98350836-98350966	MCF10A-Er-Src	breast:	n/a	n/a
41	E2F4	chr1:98315629-98315881	MCF10A-Er-Src	breast:	n/a	n/a
42	E2F4	chr1:98341578-98341837	MCF10A-Er-Src	breast:	n/a	chr1:98341578-98341587
43	EBF1	chr1:98293341-98293788	GM12878	blood:	n/a	chr1:98293524-98293533 chr1:98293522-98293533 chr1:98293524-98293534
44	EBF1	chr1:98293426-98293657	GM12878	blood:	n/a	chr1:98293524-98293533 chr1:98293522-98293533 chr1:98293524-98293534
45	EBF1	chr1:98298171-98298327	GM12878	blood:	n/a	n/a
46	EP300	chr1:98315486-98315828	SK-N-SH_RA	brain:	n/a	chr1:98315711-98315720 chr1:98315710-98315719
47	EP300	chr1:98291468-98292010	SK-N-SH_RA	brain:	n/a	chr1:98291966-98291980 chr1:98291618-98291628
48	EP300	chr1:98301397-98301683	SK-N-SH_RA	brain:	n/a	chr1:98301591-98301599
49	EP300	chr1:98302621-98302945	SK-N-SH_RA	brain:	n/a	n/a
50	EP300	chr1:98293446-98293742	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:98336448-98336498	SK-N-SH_RA	brain:	n/a
2	chr1:98336448-98336498	GM12892	blood:	n/a
3	chr1:98336448-98336498	HPAEpiC	pulmonary alveolar:	n/a
4	chr1:98336448-98336498	AG10803	skin:	n/a
5	chr1:98336448-98336498	NHBE	bronchial:	n/a
6	chr1:98336448-98336498	ovcar-3	ovarian:	n/a
7	chr1:98336448-98336498	CMK	blood:	n/a
8	chr1:98336448-98336498	AG09309	skin:	n/a
9	chr1:98336448-98336498	HRPEpiC	eye:	n/a
10	chr1:98336448-98336498	MCF10A-Er-Src	breast:	n/a
11	chr1:98336448-98336498	BJ	skin:	n/a
12	chr1:98336448-98336498	LNCaP	prostate:	n/a
13	chr1:98336448-98336498	GM19239	blood:	n/a
14	chr1:98336448-98336498	IMR90	lung:	fetal
15	chr1:98336448-98336498	SK-N-SH	brain:	n/a
16	chr1:98336448-98336498	A549	lung:	n/a
17	chr1:98336448-98336498	H1-hESC	embryonic stem cell:	embryo
18	chr1:98336448-98336498	HEK293	kidney:	embryo
19	chr1:98336448-98336498	GM06990	blood:	n/a
20	chr1:98336448-98336498	ProgFib	skin:	n/a
21	chr1:98336448-98336498	PFSK-1	brain:	n/a
22	chr1:98336448-98336498	NH-A	brain:	n/a
23	chr1:98336448-98336498	AG09319	gingival:	n/a
24	chr1:98336448-98336498	Hela-S3	cervix:	n/a
25	chr1:98336448-98336498	SK-N-MC	brain:	n/a
26	chr1:98336448-98336498	T-47D	breast:	n/a
27	chr1:98336448-98336498	K562	blood:	n/a
28	chr1:98336448-98336498	HMEC	breast:	n/a
29	chr1:98336448-98336498	HIPEpiC	eye:	n/a
30	chr1:98336448-98336498	HCT-116	colon:	n/a
31	chr1:98336448-98336498	RPTEC	kidney:	n/a
32	chr1:98336448-98336498	ECC-1	luminal epithelium:	n/a
33	chr1:98336448-98336498	BE2_C	brain:	n/a
34	chr1:98336448-98336498	NT2-D1	testis:	n/a
35	chr1:98336448-98336498	PANC-1	pancreas:	n/a
36	chr1:98336448-98336498	Caco-2	colon:	n/a
37	chr1:98336448-98336498	AG04449	skin:	fetal
38	chr1:98336448-98336498	U87	brain:	n/a
39	chr1:98336448-98336498	AG04450	lung:	fetal
40	chr1:98336448-98336498	Hepatocyte	liver:	n/a
41	chr1:98336448-98336498	NHDF-neo	bronchial:	n/a
42	chr1:98336448-98336498	SAEC	small airway:	n/a
43	chr1:98336448-98336498	Jurkat	blood:	n/a
44	chr1:98336448-98336498	HCM	heart:	n/a
45	chr1:98336448-98336498	HNPCEpiC	eye:	n/a
46	chr1:98336448-98336498	HAEpiC	amniotic membrane:	n/a
47	chr1:98336448-98336498	HCPEpiC	choroid plexus:	n/a
48	chr1:98336448-98336498	HEEpiC	esophagus:	n/a
49	chr1:98336448-98336498	AoSMC	blood vessel:	n/a
50	chr1:98336448-98336498	SKMC	muscle:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:98355629..98357274-chr1:98363279..98366044,2	K562	blood:
2	chr1:98355629..98357546-chr1:98364329..98366044,2	K562	blood:
3	chr1:98360000..98361724-chr1:98365980..98368297,2	K562	blood:
4	chr1:98277100..98278650-chr1:98293087..98294811,2	K562	blood:
5	chr1:98355629..98357274-chr1:98363279..98366044,2	K562	blood:
6	chr1:98355629..98357546-chr1:98364329..98366044,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SNX7-11	chr1:98321131-98322381	NONHSAT004723

Variant related genes	Relation type
ENSG00000270911	TF binding region
ENSG00000270911	CpG island

Extended variants
information (count: 2454 )
Associated
traits (count: 103 )

Variant overlapped rSNPs/rCNVs (count:2454 , 50 per page) page: 1 2 3 4 5 6 7 ... 50

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1974204	chr1:98290577-98290578	Enhancers Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs539161254	chr1:98290605-98290606	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs375663662	chr1:98290639-98290640	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs546732632	chr1:98290683-98290684	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs1974203	chr1:98290685-98290686	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs185289191	chr1:98290695-98290696	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs564325793	chr1:98290735-98290736	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs191186703	chr1:98290777-98290778	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs75904592	chr1:98290831-98290832	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs528592571	chr1:98290858-98290859	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs571671351	chr1:98290887-98290888	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs183400174	chr1:98290894-98290895	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs376245654	chr1:98290931-98290932	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs537022120	chr1:98290954-98290955	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs188868418	chr1:98291052-98291053	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs78104608	chr1:98291087-98291088	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs35346742	chr1:98291119-98291120	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs546023388	chr1:98291150-98291151	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs559895842	chr1:98291160-98291161	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs9970119	chr1:98291189-98291190	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs57452698	chr1:98291190-98291191	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs146541718	chr1:98291244-98291245	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs542494260	chr1:98291250-98291251	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs139077885	chr1:98291263-98291264	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs370612922	chr1:98291264-98291265	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs564078676	chr1:98291286-98291287	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs533037099	chr1:98291288-98291289	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs397940082	chr1:98291337-98291338	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs371887004	chr1:98291346-98291347	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs371848224	chr1:98291475-98291476	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs569319374	chr1:98291483-98291484	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs547156722	chr1:98291507-98291508	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs538127102	chr1:98291552-98291553	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs566635686	chr1:98291576-98291577	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs138055564	chr1:98291588-98291589	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs57990998	chr1:98291589-98291590	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs72199891	chr1:98291591-98291592	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs71821360	chr1:98291596-98291597	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs397805578	chr1:98291601-98291602	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs200250262	chr1:98291602-98291603	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs369804939	chr1:98291603-98291604	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs548778930	chr1:98291657-98291658	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs558117012	chr1:98291662-98291663	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs537761423	chr1:98291723-98291724	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs577888378	chr1:98291809-98291810	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs192943908	chr1:98291827-98291828	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs6676451	chr1:98291840-98291841	Enhancers Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs183535351	chr1:98291907-98291908	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs188122515	chr1:98291946-98291947	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs573637265	chr1:98291958-98291959	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:103)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Coronary Disease	20032323	CNVD
Prostate cancer	21965145	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Stargardt''s disease	17277736	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21385341	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Multiple myeloma	16461302	CNVD
Cancer	21129771	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Medulloblastoma	21979893	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Rett syndrome	21593744	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Ovarian cancer	21720365	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	22429812	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	17133270	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Esophageal adenocarcinoma	18820669	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Glioblastoma multiforme	21922591	CNVD
Autism	17483303	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Intestinal disease	21956041	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Gastric cancer	16891809	CNVD
Schizophrenia	17879154	CNVD
Mental retardation	17124404	CNVD
Intestinal disease	17828263	CNVD
Malignant melanoma	17260012	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:857 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:98240400-98309800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr1:98242200-98291600	Weak transcription	Dnd41	blood
3	chr1:98248600-98310600	Weak transcription	Primary B cells from cord blood	blood
4	chr1:98255800-98310800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr1:98257200-98315200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr1:98257600-98310200	Weak transcription	Primary hematopoietic stem cells	blood
7	chr1:98258000-98291400	Weak transcription	Primary T helper cells fromperipheralblood	blood
8	chr1:98258200-98293600	Weak transcription	Primary T cells from cord blood	blood
9	chr1:98270800-98293800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr1:98272800-98310200	Weak transcription	HSMM	muscle
11	chr1:98273600-98297600	Weak transcription	Psoas Muscle	Psoas
12	chr1:98274800-98311200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
13	chr1:98275600-98308400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr1:98276400-98300200	Weak transcription	Liver	Liver
15	chr1:98279000-98293600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr1:98279000-98295200	Weak transcription	Left Ventricle	heart
17	chr1:98280200-98316000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr1:98280400-98297400	Weak transcription	NHDF-Ad	bronchial
19	chr1:98280400-98298000	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr1:98286800-98294200	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr1:98287000-98297000	Weak transcription	Lung	lung
22	chr1:98287600-98309800	Weak transcription	Primary T cells fromperipheralblood	blood
23	chr1:98288400-98292600	Strong transcription	Monocytes-CD14+_RO01746	blood
24	chr1:98288800-98297400	Weak transcription	Fetal Brain Male	brain
25	chr1:98289400-98290600	Enhancers	ES-I3 Cell Line	embryonic stem cell
26	chr1:98289400-98298800	Weak transcription	Primary neutrophils fromperipheralblood	blood
27	chr1:98289800-98290800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr1:98289800-98293400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
29	chr1:98290000-98290800	Enhancers	Aorta	Aorta
30	chr1:98290000-98293400	Weak transcription	HUES64 Cell Line	embryonic stem cell
31	chr1:98290200-98290600	Enhancers	Osteobl	bone
32	chr1:98290200-98294000	Strong transcription	Primary monocytes fromperipheralblood	blood
33	chr1:98290400-98290600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr1:98290400-98290600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr1:98290400-98291600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr1:98290600-98293400	Weak transcription	Brain Inferior Temporal Lobe	brain
37	chr1:98290600-98297600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr1:98290600-98298000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr1:98290600-98298000	Weak transcription	Osteobl	bone
40	chr1:98290800-98293400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr1:98291400-98292000	Strong transcription	Primary T helper cells fromperipheralblood	blood
42	chr1:98291400-98295200	Weak transcription	Fetal Lung	lung
43	chr1:98291600-98292000	Strong transcription	Dnd41	blood
44	chr1:98291600-98292200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr1:98291600-98294200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr1:98291800-98293400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
47	chr1:98291800-98294200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr1:98292000-98293400	Weak transcription	Dnd41	blood
49	chr1:98292000-98297800	Weak transcription	Primary T helper cells fromperipheralblood	blood
50	chr1:98292200-98297800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links