Variant report

Variant	nsv871530
Chromosome Location	chr1:57793948-57858319
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:193)
CpG islands
(count:368)
Chromatin interactive
region (count:6)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:193 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr1:57850432-57850554	A549	lung:	n/a	chr1:57850477-57850488
2	CEBPB	chr1:57810407-57810538	HepG2	liver:	n/a	n/a
3	CEBPB	chr1:57801786-57801796	HepG2	liver:	n/a	n/a
4	CEBPB	chr1:57849385-57849579	HepG2	liver:	n/a	n/a
5	CEBPB	chr1:57850364-57850571	HepG2	liver:	n/a	chr1:57850477-57850488
6	CTCF	chr1:57843540-57843690	HRPEpiC	eye:	n/a	n/a
7	CTCF	chr1:57806456-57806553	MCF-7	breast:	n/a	n/a
8	CTCF	chr1:57806410-57806586	LNCaP	prostate:	n/a	n/a
9	CTCF	chr1:57843443-57843821	H1-hESC	embryonic stem cell:	n/a	n/a
10	CTCF	chr1:57806420-57806570	SAEC	small airway:	n/a	n/a
11	CTCF	chr1:57815316-57815495	HepG2	liver:	n/a	n/a
12	CTCF	chr1:57843620-57843770	Caco-2	colon:	n/a	n/a
13	CTCF	chr1:57815339-57815479	LNCaP	prostate:	n/a	n/a
14	CTCF	chr1:57806463-57806550	NHEK	skin:	n/a	n/a
15	CTCF	chr1:57806320-57806470	RPTEC	kidney:	n/a	n/a
16	CTCF	chr1:57843428-57843788	H1-hESC	embryonic stem cell:	n/a	n/a
17	CTCF	chr1:57843680-57843830	HepG2	liver:	n/a	n/a
18	CTCF	chr1:57806340-57806490	HepG2	liver:	n/a	n/a
19	CTCF	chr1:57833781-57833971	HepG2	liver:	n/a	n/a
20	CTCF	chr1:57806470-57806536	H1-hESC	embryonic stem cell:	n/a	n/a
21	CTCF	chr1:57843460-57843610	AG04450	lung:	n/a	n/a
22	CTCF	chr1:57806360-57806510	SAEC	small airway:	n/a	n/a
23	CTCF	chr1:57843640-57843790	Caco-2	colon:	n/a	n/a
24	CTCF	chr1:57806340-57806490	MCF-7	breast:	n/a	n/a
25	CTCF	chr1:57833840-57833990	HepG2	liver:	n/a	n/a
26	CTCF	chr1:57815365-57815471	LNCaP	prostate:	n/a	n/a
27	CTCF	chr1:57806458-57806536	GM19240	blood:	n/a	n/a
28	CTCF	chr1:57843621-57843675	K562	blood:	n/a	n/a
29	CTCF	chr1:57815267-57815548	K562	blood:	n/a	n/a
30	CTCF	chr1:57806420-57806570	Caco-2	colon:	n/a	n/a
31	CTCF	chr1:57843580-57843730	GM12867	blood:	n/a	n/a
32	CTCF	chr1:57806440-57806590	HMEC	breast:	n/a	n/a
33	CTCF	chr1:57843560-57843710	SK-N-SH_RA	brain:	n/a	n/a
34	CTCF	chr1:57806398-57806555	LNCaP	prostate:	n/a	n/a
35	CTCF	chr1:57806380-57806530	GM12874	blood:	n/a	n/a
36	CTCF	chr1:57806440-57806590	HEEpiC	esophagus:	n/a	n/a
37	CTCF	chr1:57806409-57806549	Pancreas_OC	pancreas:	n/a	n/a
38	CTCF	chr1:57806390-57806626	K562	blood:	n/a	n/a
39	CTCF	chr1:57815340-57815490	HRPEpiC	eye:	n/a	n/a
40	CTCF	chr1:57843550-57843679	K562	blood:	n/a	n/a
41	CTCF	chr1:57806340-57806490	WERI-Rb-1	eye:	n/a	n/a
42	CTCF	chr1:57806380-57806530	HepG2	liver:	n/a	n/a
43	CTCF	chr1:57806420-57806570	HRE	kidney:	n/a	n/a
44	CTCF	chr1:57806411-57806564	HepG2	liver:	n/a	n/a
45	CTCF	chr1:57843575-57843798	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr1:57806460-57806610	HMEC	breast:	n/a	n/a
47	CTCF	chr1:57806496-57806515	Hela-S3	cervix:	n/a	n/a
48	CTCF	chr1:57833931-57833934	Fibrobl	skin:	n/a	n/a
49	CTCF	chr1:57843580-57843730	AG10803	skin:	n/a	n/a
50	CTCF	chr1:57843600-57843750	NHEK	skin:	n/a	n/a

(count:368 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:57809419-57809469	HCF	heart:	n/a
2	chr1:57802279-57802329	Caco-2	colon:	n/a
3	chr1:57809419-57809469	HCF	heart:	n/a
4	chr1:57802279-57802329	Caco-2	colon:	n/a
5	chr1:57819219-57819269	U87	brain:	n/a
6	chr1:57816236-57816286	IMR90	lung:	fetal
7	chr1:57816236-57816286	RPTEC	kidney:	n/a
8	chr1:57819219-57819269	Jurkat	blood:	n/a
9	chr1:57822544-57822594	AG04449	skin:	fetal
10	chr1:57836927-57836977	AoSMC	blood vessel:	n/a
11	chr1:57836927-57836977	NHBE	bronchial:	n/a
12	chr1:57809419-57809469	A549	lung:	n/a
13	chr1:57809419-57809469	PFSK-1	brain:	n/a
14	chr1:57802279-57802329	A549	lung:	n/a
15	chr1:57809419-57809469	AG04449	skin:	fetal
16	chr1:57809419-57809469	GM12892	blood:	n/a
17	chr1:57809419-57809469	SK-N-MC	brain:	n/a
18	chr1:57822544-57822594	PFSK-1	brain:	n/a
19	chr1:57819219-57819269	H1-hESC	embryonic stem cell:	embryo
20	chr1:57822544-57822594	GM12892	blood:	n/a
21	chr1:57816236-57816286	AG09309	skin:	n/a
22	chr1:57819219-57819269	HRE	kidney:	n/a
23	chr1:57836927-57836977	SAEC	small airway:	n/a
24	chr1:57819219-57819269	HAEpiC	amniotic membrane:	n/a
25	chr1:57809419-57809469	SK-N-SH	brain:	n/a
26	chr1:57816236-57816286	HIPEpiC	eye:	n/a
27	chr1:57816236-57816286	HCPEpiC	choroid plexus:	n/a
28	chr1:57816236-57816286	HCF	heart:	n/a
29	chr1:57836927-57836977	AG09309	skin:	n/a
30	chr1:57802279-57802329	AG09319	gingival:	n/a
31	chr1:57819219-57819269	SAEC	small airway:	n/a
32	chr1:57819219-57819269	HRPEpiC	eye:	n/a
33	chr1:57809419-57809469	HMEC	breast:	n/a
34	chr1:57819219-57819269	SK-N-SH_RA	brain:	n/a
35	chr1:57816236-57816286	HRCEpiC	kidney:	n/a
36	chr1:57819219-57819269	AG04450	lung:	fetal
37	chr1:57802279-57802329	Hepatocyte	liver:	n/a
38	chr1:57809419-57809469	H1-hESC	embryonic stem cell:	embryo
39	chr1:57802279-57802329	HEK293	kidney:	embryo
40	chr1:57802279-57802329	HNPCEpiC	eye:	n/a
41	chr1:57819219-57819269	PFSK-1	brain:	n/a
42	chr1:57802279-57802329	AG10803	skin:	n/a
43	chr1:57822544-57822594	GM12878	blood:	n/a
44	chr1:57819219-57819269	AG09309	skin:	n/a
45	chr1:57822544-57822594	BE2_C	brain:	n/a
46	chr1:57822544-57822594	BJ	skin:	n/a
47	chr1:57809419-57809469	LNCaP	prostate:	n/a
48	chr1:57822544-57822594	GM06990	blood:	n/a
49	chr1:57816236-57816286	LNCaP	prostate:	n/a
50	chr1:57822544-57822594	SKMC	muscle:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:57798562..57800179-chr1:57803164..57805312,2	K562	blood:
2	chr1:57793484..57795323-chr1:57799611..57801917,2	K562	blood:
3	chr1:57797489..57800179-chr1:57802405..57805312,2	K562	blood:
4	chr1:57793484..57795323-chr1:57799611..57801917,2	K562	blood:
5	chr1:57798562..57800179-chr1:57803164..57805312,2	K562	blood:
6	chr1:57797489..57800179-chr1:57802405..57805312,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C8A-3	chr1:57852248-57852394	ENSG00000227935
2	lnc-C8A-3	chr1:57852562-57853122	ENSG00000227935

No data

Variant related genes	Relation type
ENSG00000227935	TF binding region
ENSG00000227935	CpG island

Extended variants
information (count: 2574 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:2574 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12401342	chr1:57793948-57793949	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs530153901	chr1:57793949-57793950	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs115702875	chr1:57793961-57793962	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs184629391	chr1:57793986-57793987	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs374495702	chr1:57793989-57793990	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs367914712	chr1:57793993-57793994	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs190312125	chr1:57794024-57794025	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs536687466	chr1:57794026-57794027	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs552289568	chr1:57794041-57794042	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs75247557	chr1:57794052-57794053	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs538143767	chr1:57794168-57794169	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs555174899	chr1:57794169-57794170	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs568644153	chr1:57794170-57794171	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs11207008	chr1:57794173-57794174	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs553862772	chr1:57794199-57794200	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs146460727	chr1:57794232-57794233	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs74466341	chr1:57794239-57794240	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs557602484	chr1:57794298-57794299	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs139117772	chr1:57794356-57794357	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs143145206	chr1:57794379-57794380	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs561559489	chr1:57794440-57794441	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs371408511	chr1:57794494-57794495	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs553865736	chr1:57794544-57794545	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs527441651	chr1:57794548-57794549	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs543543742	chr1:57794595-57794596	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs540330688	chr1:57794596-57794597	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs115073583	chr1:57794598-57794599	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs182551303	chr1:57794606-57794607	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs552577833	chr1:57794618-57794619	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs6700275	chr1:57794624-57794625	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs139131303	chr1:57794757-57794758	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs548567275	chr1:57794778-57794779	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs568679324	chr1:57794795-57794796	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs534343535	chr1:57794816-57794817	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs12057878	chr1:57794893-57794894	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs554397518	chr1:57794905-57794906	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs570595342	chr1:57794916-57794917	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs539136785	chr1:57794927-57794928	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs117594684	chr1:57794929-57794930	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs575911195	chr1:57794931-57794932	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs184331545	chr1:57794992-57794993	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs555192334	chr1:57795011-57795012	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs149510304	chr1:57795030-57795031	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs144136460	chr1:57795105-57795106	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs557777791	chr1:57795106-57795107	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs189463972	chr1:57795148-57795149	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs532669284	chr1:57795149-57795150	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs166514	chr1:57795150-57795151	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs68120093	chr1:57795151-57795152	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs605774	chr1:57795164-57795165	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Papillary thyroid carcinoma	21436994	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Coronary Disease	20032323	CNVD
Prostate cancer	21965145	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Stargardt''s disease	17277736	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21385341	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Multiple myeloma	16461302	CNVD
Melanoma	17363583	CNVD
Cancer	21129771	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Rett syndrome	21593744	CNVD
Meckel-Gruber syndrome	21572526	CNVD
Breast cancer	16620391	CNVD
Multiple myeloma	16616336	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Developmental delay	19490664	CNVD
Glioblastoma multiforme	22286061	CNVD
Ovarian cancer	21720365	CNVD
Breast cancer	22522925	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Developmental delay	21147756	CNVD

Chromatin state (count:315 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:57791200-57794200	Enhancers	Stomach Smooth Muscle	stomach
2	chr1:57791200-57798600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr1:57792400-57806200	Weak transcription	Fetal Intestine Small	intestine
4	chr1:57792800-57794200	Enhancers	Fetal Brain Female	brain
5	chr1:57793800-57794000	Enhancers	Fetal Brain Male	brain
6	chr1:57793800-57794600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr1:57793800-57796200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr1:57794000-57801400	Weak transcription	Fetal Brain Male	brain
9	chr1:57794600-57796200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr1:57794800-57795200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr1:57794800-57795200	Enhancers	Ovary	ovary
12	chr1:57796200-57796600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr1:57798600-57799200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr1:57799200-57801600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr1:57799600-57800000	Enhancers	Right Ventricle	heart
16	chr1:57799800-57800000	Enhancers	Left Ventricle	heart
17	chr1:57800000-57826600	Weak transcription	Left Ventricle	heart
18	chr1:57801200-57803200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr1:57801400-57802200	Enhancers	Fetal Brain Male	brain
20	chr1:57801600-57803800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr1:57801800-57803200	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr1:57802000-57803200	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr1:57802000-57803800	Enhancers	HUES48 Cell Line	embryonic stem cell
24	chr1:57802200-57802400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr1:57802200-57802600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
26	chr1:57802200-57802600	Enhancers	Fetal Lung	lung
27	chr1:57802200-57803000	Enhancers	ES-I3 Cell Line	embryonic stem cell
28	chr1:57802200-57803200	Enhancers	HUES64 Cell Line	embryonic stem cell
29	chr1:57802200-57803400	Enhancers	HUES6 Cell Line	embryonic stem cell
30	chr1:57802200-57803400	Enhancers	iPS-15b Cell Line	embryonic stem cell
31	chr1:57802200-57809000	Weak transcription	Fetal Brain Male	brain
32	chr1:57802400-57806200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
33	chr1:57802600-57803200	Enhancers	H1 Cell Line	embryonic stem cell
34	chr1:57802600-57803200	Enhancers	H9 Cell Line	embryonic stem cell
35	chr1:57802600-57803200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr1:57803200-57804200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr1:57803200-57816000	Weak transcription	H9 Cell Line	embryonic stem cell
38	chr1:57803800-57805600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr1:57803800-57811600	Weak transcription	HUES48 Cell Line	embryonic stem cell
40	chr1:57804200-57804600	Genic enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr1:57804600-57805200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr1:57805200-57807200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr1:57805600-57805800	Enhancers	Fetal Brain Female	brain
44	chr1:57805600-57806400	Enhancers	Liver	Liver
45	chr1:57805600-57806800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr1:57806000-57807400	Weak transcription	Fetal Brain Female	brain
47	chr1:57806200-57806400	Enhancers	Fetal Intestine Small	intestine
48	chr1:57806200-57807600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr1:57806800-57810400	Weak transcription	Fetal Heart	heart
50	chr1:57806800-57810800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links