Variant report

Variant nsv871840
Chromosome Location chr1:103384610-103455217
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:204 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:103345600-103385600 Weak transcription HSMMtube muscle
2 chr1:103352600-103403200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:103363800-103385400 Weak transcription NH-A brain
4 chr1:103369600-103498600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:103371200-103385000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr1:103376000-103385800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:103378800-103400000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:103380000-103399000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:103380800-103393000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:103381200-103399400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:103381400-103385800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:103382200-103393000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr1:103384400-103385800 Enhancers HSMM muscle
14 chr1:103384400-103386200 Enhancers Muscle Satellite Cultured Cells --
15 chr1:103384400-103386200 Enhancers Osteobl bone
16 chr1:103384400-103387400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:103384600-103385200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:103384600-103386200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:103385000-103387000 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:103385200-103386000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:103385400-103385600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr1:103385400-103386000 Enhancers NH-A brain
23 chr1:103385600-103385800 Enhancers HSMMtube muscle
24 chr1:103385600-103386000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:103385800-103386000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:103385800-103388800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:103385800-103401000 Weak transcription HSMM muscle
28 chr1:103386000-103386200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:103386000-103407000 Weak transcription NH-A brain
30 chr1:103386200-103393000 Weak transcription Osteobl bone
31 chr1:103386200-103399600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:103386200-103482000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:103387000-103394400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:103387400-103392800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:103388800-103392800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:103392800-103394200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:103392800-103394200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:103393000-103393400 Active TSS Osteobl bone
39 chr1:103393000-103393600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:103393000-103394200 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr1:103393400-103393600 Flanking Active TSS Osteobl bone
42 chr1:103393600-103399200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:103394200-103399000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:103394200-103399000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:103394200-103399000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:103394400-103395000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:103395000-103395200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:103395200-103397800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:103397800-103399400 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr1:103397800-103414200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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