Variant report

Variant	nsv872461
Chromosome Location	chr1:155151493-155169633
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1416)
CpG islands
(count:1773)
Chromatin interactive
region (count:121)
LncRNA
region (count:7)
Mature miRNA
region (count: 2)
miRNA target
sites (count:1)

(count:1416 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:155163135-155163500	K562	blood:	n/a	n/a
2	ARID3A	chr1:155163429-155163588	HepG2	liver:	n/a	n/a
3	ATF1	chr1:155164174-155164886	K562	blood:	n/a	chr1:155164565-155164579
4	ATF2	chr1:155164399-155164767	GM12878	blood:	n/a	chr1:155164567-155164578 chr1:155164565-155164579
5	ATF2	chr1:155164030-155164950	H1-hESC	embryonic stem cell:	n/a	chr1:155164567-155164578 chr1:155164565-155164579
6	ATF2	chr1:155164025-155164982	H1-hESC	embryonic stem cell:	n/a	chr1:155164567-155164578 chr1:155164565-155164579
7	ATF2	chr1:155165668-155167095	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr1:155165142-155167396	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr1:155165115-155165658	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr1:155164267-155164714	GM12878	blood:	n/a	chr1:155164567-155164578 chr1:155164565-155164579
11	ATF2	chr1:155168003-155168531	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr1:155163180-155163620	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF3	chr1:155164340-155164892	K562	blood:	n/a	chr1:155164567-155164580 chr1:155164569-155164576 chr1:155164565-155164578 chr1:155164569-155164579 chr1:155164566-155164579 chr1:155164566-155164579 chr1:155164712-155164726 chr1:155164565-155164580 chr1:155164568-155164579 chr1:155164567-155164578 chr1:155164569-155164579
14	ATF3	chr1:155164164-155164878	K562	blood:	n/a	chr1:155164567-155164580 chr1:155164569-155164576 chr1:155164565-155164578 chr1:155164569-155164579 chr1:155164566-155164579 chr1:155164566-155164579 chr1:155164712-155164726 chr1:155164565-155164580 chr1:155164568-155164579 chr1:155164567-155164578 chr1:155164569-155164579
15	ATF3	chr1:155164014-155164924	A549	lung:	n/a	chr1:155164567-155164580 chr1:155164569-155164576 chr1:155164565-155164578 chr1:155164569-155164579 chr1:155164566-155164579 chr1:155164566-155164579 chr1:155164712-155164726 chr1:155164565-155164580 chr1:155164568-155164579 chr1:155164567-155164578 chr1:155164569-155164579
16	ATF3	chr1:155163143-155163855	A549	lung:	n/a	chr1:155163657-155163677
17	ATF3	chr1:155164292-155164893	A549	lung:	n/a	chr1:155164567-155164580 chr1:155164569-155164576 chr1:155164565-155164578 chr1:155164569-155164579 chr1:155164566-155164579 chr1:155164566-155164579 chr1:155164712-155164726 chr1:155164565-155164580 chr1:155164568-155164579 chr1:155164567-155164578 chr1:155164569-155164579
18	ATF3	chr1:155163200-155163730	A549	lung:	n/a	chr1:155163657-155163677
19	BACH1	chr1:155163141-155163800	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr1:155163286-155163675	K562	blood:	n/a	n/a
21	BACH1	chr1:155164346-155164546	K562	blood:	n/a	n/a
22	BACH1	chr1:155164127-155164777	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr1:155158577-155158581	H1-hESC	embryonic stem cell:	n/a	n/a
24	BCL11A	chr1:155157852-155158151	GM12878	blood:	n/a	n/a
25	BCL3	chr1:155162937-155164820	A549	lung:	n/a	n/a
26	BCL3	chr1:155157821-155158153	GM12878	blood:	n/a	n/a
27	BCL3	chr1:155163979-155164716	A549	lung:	n/a	n/a
28	BCL3	chr1:155163030-155163766	A549	lung:	n/a	n/a
29	BCLAF1	chr1:155163190-155163678	GM12878	blood:	n/a	n/a
30	BHLHE40	chr1:155163064-155164834	K562	blood:	n/a	n/a
31	BHLHE40	chr1:155164136-155164487	HepG2	liver:	n/a	n/a
32	BHLHE40	chr1:155164076-155164823	GM12878	blood:	n/a	n/a
33	BHLHE40	chr1:155161078-155161718	HepG2	liver:	n/a	n/a
34	BHLHE40	chr1:155164093-155164569	A549	lung:	n/a	n/a
35	BHLHE40	chr1:155157785-155158391	GM12878	blood:	n/a	n/a
36	BRCA1	chr1:155163274-155163644	H1-hESC	embryonic stem cell:	n/a	n/a
37	BRCA1	chr1:155164214-155164875	H1-hESC	embryonic stem cell:	n/a	n/a
38	BRCA1	chr1:155162848-155163722	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr1:155163005-155163071	GM12878	blood:	n/a	n/a
40	BRCA1	chr1:155164270-155164893	Hela-S3	cervix:	n/a	n/a
41	BRCA1	chr1:155163410-155163579	HepG2	liver:	n/a	n/a
42	BRCA1	chr1:155164583-155164783	GM12878	blood:	n/a	n/a
43	BRCA1	chr1:155165730-155166565	H1-hESC	embryonic stem cell:	n/a	n/a
44	CBX3	chr1:155164058-155164458	K562	blood:	n/a	n/a
45	CBX3	chr1:155163257-155163620	K562	blood:	n/a	n/a
46	CBX3	chr1:155162734-155164889	K562	blood:	n/a	n/a
47	CCNT2	chr1:155162883-155163703	K562	blood:	n/a	chr1:155162948-155162957 chr1:155162941-155162950
48	CCNT2	chr1:155164160-155164940	K562	blood:	n/a	chr1:155164839-155164848
49	CEBPB	chr1:155163299-155163490	K562	blood:	n/a	n/a
50	CEBPB	chr1:155151241-155151779	A549	lung:	n/a	n/a

(count:1773 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:155157194-155157244	HCT-116	colon:	n/a
2	chr1:155161784-155161834	NH-A	brain:	n/a
3	chr1:155157194-155157244	IMR90	lung:	fetal
4	chr1:155163205-155163255	HMEC	breast:	n/a
5	chr1:155157194-155157244	HCT-116	colon:	n/a
6	chr1:155161784-155161834	NH-A	brain:	n/a
7	chr1:155157194-155157244	IMR90	lung:	fetal
8	chr1:155163205-155163255	HMEC	breast:	n/a
9	chr1:155164363-155164413	T-47D	breast:	n/a
10	chr1:155152367-155152417	A549	lung:	n/a
11	chr1:155162871-155162921	H1-hESC	embryonic stem cell:	embryo
12	chr1:155162756-155162806	GM19239	blood:	n/a
13	chr1:155163661-155163711	HL-60	blood:	n/a
14	chr1:155167780-155167830	A549	lung:	n/a
15	chr1:155157194-155157244	MCF-7	breast:	n/a
16	chr1:155163542-155163592	NHBE	bronchial:	n/a
17	chr1:155161679-155161729	SKMC	muscle:	n/a
18	chr1:155163542-155163592	GM12891	blood:	n/a
19	chr1:155163013-155163063	HUVEC	blood vessel:	n/a
20	chr1:155164676-155164726	GM12892	blood:	n/a
21	chr1:155163240-155163290	NH-A	brain:	n/a
22	chr1:155157194-155157244	HCPEpiC	choroid plexus:	n/a
23	chr1:155161833-155161883	HepG2	liver:	n/a
24	chr1:155165037-155165087	HCM	heart:	n/a
25	chr1:155164873-155164923	Caco-2	colon:	n/a
26	chr1:155162871-155162921	PANC-1	pancreas:	n/a
27	chr1:155162871-155162921	AG10803	skin:	n/a
28	chr1:155152367-155152417	HUVEC	blood vessel:	n/a
29	chr1:155152367-155152417	HRE	kidney:	n/a
30	chr1:155161833-155161883	HPAEpiC	pulmonary alveolar:	n/a
31	chr1:155161221-155161271	HIPEpiC	eye:	n/a
32	chr1:155157194-155157244	HRPEpiC	eye:	n/a
33	chr1:155163013-155163063	Hela-S3	cervix:	n/a
34	chr1:155165346-155165396	IMR90	lung:	fetal
35	chr1:155163240-155163290	PrEC	prostate:	n/a
36	chr1:155157194-155157244	SK-N-MC	brain:	n/a
37	chr1:155163661-155163711	HRPEpiC	eye:	n/a
38	chr1:155152367-155152417	Jurkat	blood:	n/a
39	chr1:155161679-155161729	HPAEpiC	pulmonary alveolar:	n/a
40	chr1:155163240-155163290	SK-N-SH_RA	brain:	n/a
41	chr1:155164363-155164413	RPTEC	kidney:	n/a
42	chr1:155152367-155152417	AG10803	skin:	n/a
43	chr1:155164676-155164726	HepG2	liver:	n/a
44	chr1:155164676-155164726	Jurkat	blood:	n/a
45	chr1:155165346-155165396	GM19239	blood:	n/a
46	chr1:155161211-155161261	CMK	blood:	n/a
47	chr1:155163542-155163592	IMR90	lung:	fetal
48	chr1:155163240-155163290	K562	blood:	n/a
49	chr1:155163661-155163711	PrEC	prostate:	n/a
50	chr1:155161221-155161271	PANC-1	pancreas:	n/a

(count:121 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr1:155105295..155110704-chr1:155161873..155165835,7	K562	blood:
2	chr1:155111495..155114008-chr1:155163515..155166006,3	K562	blood:
3	chr1:155163009..155163576-chr5:43121348..43122173,2	Hela-S3	cervix:
4	chr1:155163628..155164371-chr12:52541163..52541796,2	Hela-S3	cervix:
5	chr1:155163254..155164121-chr1:178995131..178996078,2	Hela-S3	cervix:
6	chr1:155106788..155108939-chr1:155162594..155164354,3	MCF-7	breast:
7	chr1:154939910..154941909-chr1:155165314..155168020,2	MCF-7	breast:
8	chr1:155163631..155164535-chr11:124543329..124544039,2	Hela-S3	cervix:
9	chr1:155164294..155166772-chr1:155270473..155272083,2	K562	blood:
10	chr1:155163169..155163906-chr1:155176359..155177228,4	MCF-7	breast:
11	chr1:155162671..155164140-chr15:65588192..65588839,3	Hela-S3	cervix:
12	chr1:155163789..155164613-chr6:34393377..34394245,2	Hela-S3	cervix:
13	chr1:155049427..155051718-chr1:155163518..155166382,2	K562	blood:
14	chr1:155160177..155166575-chr1:155191666..155199927,14	MCF-7	breast:
15	chr1:155164680..155165274-chr22:38713861..38714386,2	Hela-S3	cervix:
16	chr1:155162882..155163515-chr8:48873266..48874033,2	Hela-S3	cervix:
17	chr1:155162741..155164778-chr1:155231161..155233767,3	K562	blood:
18	chr1:155163173..155164182-chr10:74032582..74033760,3	Hela-S3	cervix:
19	chr1:155023320..155025791-chr1:155164716..155166404,2	K562	blood:
20	chr1:155163305..155163871-chr19:41222728..41223580,2	Hela-S3	cervix:
21	chr1:155110723..155112742-chr1:155150988..155153173,2	K562	blood:
22	chr1:155161998..155167332-chr1:155208163..155212538,6	K562	blood:
23	chr1:155162882..155163604-chr6:26033354..26033888,2	Hela-S3	cervix:
24	chr1:154192824..154194792-chr1:155163140..155164963,2	K562	blood:
25	chr1:155160390..155165295-chr1:155194589..155199400,14	K562	blood:
26	chr1:155164474..155166178-chr1:155292022..155293780,2	K562	blood:
27	chr1:155148301..155150189-chr1:155162933..155164249,12	MCF-7	breast:
28	chr1:155164001..155164833-chr17:41392833..41393515,2	Hela-S3	cervix:
29	chr1:155162888..155163772-chr1:155196595..155197463,2	MCF-7	breast:
30	chr1:155164065..155164688-chr5:40833264..40834066,2	Hela-S3	cervix:
31	chr1:155163753..155165613-chr1:155247738..155249904,2	K562	blood:
32	chr1:155034206..155036966-chr1:155163322..155165857,2	MCF-7	breast:
33	chr1:155164184..155164715-chr10:114833652..114834357,2	Hela-S3	cervix:
34	chr1:155160293..155162117-chr1:155291803..155294447,2	K562	blood:
35	chr1:155090194..155092132-chr1:155163035..155164929,2	MCF-7	breast:
36	chr1:155094769..155105017-chr1:155135344..155151845,46	MCF-7	breast:
37	chr1:155161598..155164529-chr1:155278690..155280381,2	MCF-7	breast:
38	chr1:155143901..155153030-chr1:155191166..155199183,23	MCF-7	breast:
39	chr1:154945649..154947897-chr1:155163027..155164595,2	K562	blood:
40	chr1:155106165..155110704-chr1:155161873..155165835,8	K562	blood:
41	chr1:155162847..155164513-chr1:155220020..155222402,2	K562	blood:
42	chr1:155055391..155058180-chr1:155162719..155165085,4	K562	blood:
43	chr1:155161236..155164985-chr1:155290580..155295192,7	K562	blood:
44	chr1:155165434..155167473-chr1:155242958..155244687,2	MCF-7	breast:
45	chr1:155167345..155170267-chr1:155238790..155240384,2	MCF-7	breast:
46	chr1:155162843..155163672-chr19:47776511..47777264,2	Hela-S3	cervix:
47	chr1:155162983..155163857-chr1:155292790..155293293,2	K562	blood:
48	chr1:155145302..155146232-chr1:155163021..155163628,3	K562	blood:
49	chr1:155163287..155163915-chr14:50154460..50155250,2	Hela-S3	cervix:
50	chr1:155162933..155163891-chr7:150777812..150778399,2	HCT-116	colon:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-THBS3-2	chr1:155165778-155166233	NONHSAT006702
2	lnc-MTX1-1	chr1:155168375-155168409	ENSG00000231064.1
3	lnc-THBS3-2	chr1:155165379-155165690	NONHSAT006702
4	lnc-KRTCAP2-2	chr1:155162578-155162707	NONHSAT006698
5	lnc-KRTCAP2-2	chr1:155162577-155162700	NONHSAT006696
6	lnc-KRTCAP2-2	chr1:155161994-155162065	NONHSAT006698
7	lnc-KRTCAP2-2	chr1:155161654-155162101	NONHSAT006696

miRNA name	Chromosome Location	mirBase accession
hsa-miR-92b-5p	chr1:155164987-155165008	MIMAT0004792
hsa-miR-92b-3p	chr1:155165028-155165049	MIMAT0003218

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	MUC1	hsa-miR-145-5p	chr1:155158330-155158348

Variant related genes	Relation type
MIR92B	TF binding region
THBS3	TF binding region
ENSG00000231064	TF binding region
MUC1	TF binding region
ENSG00000273088	TF binding region
MIR92B	CpG island
THBS3	CpG island
ENSG00000231064	CpG island
MUC1	CpG island
ENSG00000273088	CpG island
ENSG00000270800	chromatin interactions
ENSG00000179933	chromatin interactions
ENSG00000143537	chromatin interactions
ENSG00000064199	chromatin interactions
ENSG00000232519	chromatin interactions
ENSG00000116521	chromatin interactions
ENSG00000116539	chromatin interactions
ENSG00000174374	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000171223	chromatin interactions
ENSG00000149273	chromatin interactions
ENSG00000160691	chromatin interactions
ENSG00000160753	chromatin interactions
ENSG00000160685	chromatin interactions
ENSG00000170144	chromatin interactions
ENSG00000137259	chromatin interactions
ENSG00000124614	chromatin interactions
ENSG00000204569	chromatin interactions
ENSG00000266559	chromatin interactions
ENSG00000123815	chromatin interactions
ENSG00000086544	chromatin interactions
ENSG00000143612	chromatin interactions
ENSG00000166886	chromatin interactions
ENSG00000143569	chromatin interactions
ENSG00000129282	chromatin interactions
ENSG00000140941	chromatin interactions
ENSG00000143590	chromatin interactions
ENSG00000204634	chromatin interactions
ENSG00000263721	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000216109	chromatin interactions
ENSG00000160752	chromatin interactions
ENSG00000103264	chromatin interactions
ENSG00000176444	chromatin interactions
ENSG00000243364	chromatin interactions
ENSG00000179085	chromatin interactions
ENSG00000229337	chromatin interactions
ENSG00000160767	chromatin interactions
ENSG00000111678	chromatin interactions
ENSG00000235919	chromatin interactions
ENSG00000100813	chromatin interactions
ENSG00000100479	chromatin interactions
ENSG00000068308	chromatin interactions
ENSG00000108423	chromatin interactions
ENSG00000163463	chromatin interactions
ENSG00000143627	chromatin interactions
ENSG00000203761	chromatin interactions
ENSG00000173207	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000164896	chromatin interactions
ENSG00000110013	chromatin interactions
ENSG00000013588	chromatin interactions
ENSG00000172757	chromatin interactions
ENSG00000163462	chromatin interactions
ENSG00000202027	chromatin interactions
ENSG00000158435	chromatin interactions
ENSG00000172262	chromatin interactions
ENSG00000177628	chromatin interactions
ENSG00000164327	chromatin interactions
ENSG00000168209	chromatin interactions
ENSG00000108443	chromatin interactions
ENSG00000160766	chromatin interactions
ENSG00000251246	chromatin interactions
ENSG00000238923	chromatin interactions
ENSG00000125459	chromatin interactions
ENSG00000104738	chromatin interactions
ENSG00000161204	chromatin interactions
ENSG00000169241	chromatin interactions
ENSG00000213923	chromatin interactions
ENSG00000225855	chromatin interactions
ENSG00000169242	chromatin interactions
ENSG00000114346	chromatin interactions
ENSG00000011275	chromatin interactions
ENSG00000156482	chromatin interactions
GPX1	Mature miRNA region
SMAP2	Mature miRNA region
KMT2D	Mature miRNA region
FAM3C	Mature miRNA region
IGSF8	Mature miRNA region
METRN	Mature miRNA region
FBXO21	Mature miRNA region
ZNF282	Mature miRNA region
PWP1	Mature miRNA region
NCAPD2	Mature miRNA region
MBNL1	Mature miRNA region
ZSCAN18	Mature miRNA region
PPIL1	Mature miRNA region
NONO	Mature miRNA region
WARS	Mature miRNA region
COPA	Mature miRNA region
GRB2	Mature miRNA region
USP6NL	Mature miRNA region
PLA2G12A	Mature miRNA region
XPO7	Mature miRNA region
SPC24	Mature miRNA region
RERE	Mature miRNA region
RBM8A	Mature miRNA region
PTBP1	Mature miRNA region
LARS	Mature miRNA region
CAD	Mature miRNA region
TCP11L1	Mature miRNA region
MRPS23	Mature miRNA region
REXO2	Mature miRNA region
IK	Mature miRNA region
BRD8	Mature miRNA region
TPT1	Mature miRNA region
NIPA2	Mature miRNA region
CDKN1C	Mature miRNA region
HIST1H2BI	Mature miRNA region
FOXN3	Mature miRNA region
DDT	Mature miRNA region
MSH3	Mature miRNA region
ANKRD52	Mature miRNA region
DEXI	Mature miRNA region
HAGH	Mature miRNA region
RBBP5	Mature miRNA region
NLK	Mature miRNA region
GLOD4	Mature miRNA region
ABR	Mature miRNA region
DDX3X	Mature miRNA region
FASN	Mature miRNA region
SRP68	Mature miRNA region
NCL	Mature miRNA region
GPI	Mature miRNA region
PRRC2A	Mature miRNA region
ATP13A1	Mature miRNA region
RNF181	Mature miRNA region
AP1B1	Mature miRNA region
PYCR2	Mature miRNA region
NACC2	Mature miRNA region
CACNG8	Mature miRNA region
AP2A2	Mature miRNA region
HIST1H2AM	Mature miRNA region
SFXN1	Mature miRNA region
CAMSAP1	Mature miRNA region
PSMD3	Mature miRNA region
BCKDK	Mature miRNA region
RPL3	Mature miRNA region
ORAOV1	Mature miRNA region
PRKCSH	Mature miRNA region
FBN2	Mature miRNA region
ADAT1	Mature miRNA region
PHRF1	Mature miRNA region
SIN3A	Mature miRNA region
MAPK1	Mature miRNA region
GRHPR	Mature miRNA region
SOGA1	Mature miRNA region
PDIK1L	Mature miRNA region
TCOF1	Mature miRNA region
NABP2	Mature miRNA region
MMS19	Mature miRNA region
TLN1	Mature miRNA region
KIAA1671	Mature miRNA region
RPS28	Mature miRNA region
SSRP1	Mature miRNA region
CAPRIN1	Mature miRNA region
LTBP3	Mature miRNA region
GATA6	Mature miRNA region
UNC5B	Mature miRNA region
OR6V1	Mature miRNA region
THAP10	Mature miRNA region
IFIT3	Mature miRNA region
KEAP1	Mature miRNA region
HEATR2	Mature miRNA region
SYMPK	Mature miRNA region
HIST2H2AC	Mature miRNA region
TMEM115	Mature miRNA region
MT-CO1	Mature miRNA region
PFKFB4	Mature miRNA region
FJX1	Mature miRNA region
CISD1	Mature miRNA region
MPHOSPH10	Mature miRNA region
GNAI2	Mature miRNA region
ACTN4	Mature miRNA region
AKAP8	Mature miRNA region
SAMD4B	Mature miRNA region
PA2G4	Mature miRNA region
CSDE1	Mature miRNA region
MAP3K2	Mature miRNA region
IARS2	Mature miRNA region
XRCC1	Mature miRNA region
NFATC2IP	Mature miRNA region
RBM10	Mature miRNA region
TSPYL1	Mature miRNA region
USF1	Mature miRNA region
GATAD2A	Mature miRNA region
SFPQ	Mature miRNA region
RNF168	Mature miRNA region
UBE2Q2	Mature miRNA region
PGAM1	Mature miRNA region
HSPA1B	Mature miRNA region
SLCO4A1	Mature miRNA region
DNAJC30	Mature miRNA region
RPLP0	Mature miRNA region
PSMB3	Mature miRNA region
HIST4H4	Mature miRNA region
FAM58A	Mature miRNA region
RAN	Mature miRNA region
DENND4A	Mature miRNA region
HIST1H2BO	Mature miRNA region
CTC1	Mature miRNA region
ADCK4	Mature miRNA region
ZBTB48	Mature miRNA region
C9orf64	Mature miRNA region
UROD	Mature miRNA region
GNB2	Mature miRNA region
TUBB6	Mature miRNA region
RPAP1	Mature miRNA region
PARK7	Mature miRNA region
GSS	Mature miRNA region
PIN4	Mature miRNA region
DOCK11	Mature miRNA region
PFN1	Mature miRNA region
CRIM1	Mature miRNA region
PHF19	Mature miRNA region
PABPN1	Mature miRNA region
EIF2B2	Mature miRNA region
MYH10	Mature miRNA region
MRPL39	Mature miRNA region
RPS4X	Mature miRNA region
CAPN15	Mature miRNA region
LDLR	Mature miRNA region
IARS	Mature miRNA region
SLC25A4	Mature miRNA region
TNPO2	Mature miRNA region
CEP152	Mature miRNA region
APOLD1	Mature miRNA region
RRP1	Mature miRNA region
SKI	Mature miRNA region
SRGAP1	Mature miRNA region
NPM1	Mature miRNA region
RTKN2	Mature miRNA region
EDF1	Mature miRNA region
ASF1B	Mature miRNA region
RPL8	Mature miRNA region
GSTM3	Mature miRNA region
FKBP4	Mature miRNA region
ATP5G3	Mature miRNA region
ARID1B	Mature miRNA region
BBX	Mature miRNA region
LYST	Mature miRNA region
ACOX1	Mature miRNA region
EFNB1	Mature miRNA region
SYNGAP1	Mature miRNA region
ABCA3	Mature miRNA region
MDK	Mature miRNA region
PCMTD1	Mature miRNA region
RBM14	Mature miRNA region
MEX3B	Mature miRNA region
NDE1	Mature miRNA region
ARL6IP4	Mature miRNA region
RPS3A	Mature miRNA region
GPR55	Mature miRNA region
FBXO31	Mature miRNA region
KDM2A	Mature miRNA region
DLST	Mature miRNA region
HIST1H2AJ	Mature miRNA region
OGFR	Mature miRNA region
HPS6	Mature miRNA region
KDM3A	Mature miRNA region
RNASEK	Mature miRNA region
POFUT1	Mature miRNA region
LUC7L3	Mature miRNA region
CIT	Mature miRNA region
EZH2	Mature miRNA region
PHF23	Mature miRNA region
ORC1	Mature miRNA region
PSMA7	Mature miRNA region
POM121	Mature miRNA region
FLNB	Mature miRNA region
PIGO	Mature miRNA region
PRR5	Mature miRNA region
TRAFD1	Mature miRNA region
CCDC22	Mature miRNA region
ILF3	Mature miRNA region
MAFK	Mature miRNA region
SLC25A5	Mature miRNA region
SUPT5H	Mature miRNA region
PRMT5	Mature miRNA region
EIF2AK1	Mature miRNA region
PARVG	Mature miRNA region
EIF3A	Mature miRNA region
ALDOA	Mature miRNA region
SMARCC2	Mature miRNA region
BAG6	Mature miRNA region
TAF12	Mature miRNA region
WDR82	Mature miRNA region
SURF6	Mature miRNA region
SLC15A1	Mature miRNA region
PRRC2B	Mature miRNA region
YWHAE	Mature miRNA region
G6PD	Mature miRNA region
FLNA	Mature miRNA region
RPS14	Mature miRNA region
AMIGO1	Mature miRNA region
ERICH1	Mature miRNA region
STRBP	Mature miRNA region
XPO5	Mature miRNA region
SCAF1	Mature miRNA region
U2AF2	Mature miRNA region
PPP1CB	Mature miRNA region
PLXND1	Mature miRNA region
SMG1	Mature miRNA region
MRPL53	Mature miRNA region
SNRNP70	Mature miRNA region

Extended variants
information (count: 771 )
Associated
traits (count: 101 )

Variant overlapped rSNPs/rCNVs (count:771 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11264341	chr1:155151493-155151494	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance disease
2	rs569052904	chr1:155151498-155151499	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs374322169	chr1:155151515-155151516	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs148274827	chr1:155151553-155151554	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs559601020	chr1:155151596-155151597	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs533048623	chr1:155151656-155151657	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs368250505	chr1:155151683-155151684	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs551177008	chr1:155151717-155151718	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs569498355	chr1:155151723-155151724	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs9426886	chr1:155151754-155151755	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs549062825	chr1:155151762-155151763	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs567363903	chr1:155151769-155151770	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs375203674	chr1:155151800-155151801	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs553047970	chr1:155151819-155151820	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs534071833	chr1:155151833-155151834	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs114525519	chr1:155151837-155151838	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs570765420	chr1:155151889-155151890	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs538932642	chr1:155151891-155151892	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs557624257	chr1:155151892-155151893	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs539806550	chr1:155151911-155151912	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs556539810	chr1:155151951-155151952	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs543580709	chr1:155151977-155151978	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs555508703	chr1:155151989-155151990	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs150200936	chr1:155152045-155152046	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs570027349	chr1:155152064-155152065	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs376438576	chr1:155152084-155152085	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs367820042	chr1:155152093-155152094	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs200248319	chr1:155152094-155152095	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs143047790	chr1:155152120-155152121	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs541041708	chr1:155152124-155152125	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs76872124	chr1:155152205-155152206	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs369568615	chr1:155152209-155152210	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs372905417	chr1:155152210-155152211	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs200280987	chr1:155152212-155152213	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs376153941	chr1:155152221-155152222	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs201782832	chr1:155152229-155152230	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs370747351	chr1:155152239-155152240	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs374448627	chr1:155152257-155152258	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs144348158	chr1:155152258-155152259	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs200642219	chr1:155152266-155152267	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs376526448	chr1:155152267-155152268	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs202106443	chr1:155152273-155152274	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs370196346	chr1:155152296-155152297	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs563190780	chr1:155152336-155152337	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs148757333	chr1:155152364-155152365	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs374432261	chr1:155152368-155152369	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs540479338	chr1:155152400-155152401	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs139756484	chr1:155152403-155152404	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs555672350	chr1:155152455-155152456	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs528552235	chr1:155152474-155152475	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:101)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Non-small cell lung cancer	21385341	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21183584	CNVD
Multiple myeloma	16461302	CNVD
Lung cancer	18438408	CNVD
Rett syndrome	21593744	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Systemic lupus erythematosus	21956041	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Non-small cell lung cancer	21829676	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	17899364	CNVD
Bladder cancer	19088036	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Retinoblastoma	19183342	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	17060936	CNVD
Multiple myeloma	16616336	CNVD
Type 2 diabetes	19141583	CNVD
Chordoma	18071362	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Urothelial carcinoma	21177765	CNVD
Burkitt''s lymphoma	19759907	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21509527	CNVD
Bladder cancer	21909424	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Testicular germ cell tumor	18059402	CNVD
Trisomy 5 syndrome	21098271	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Glioblastoma multiforme	21138945	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21611746	CNVD
Neuroblastoma	18923191	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Dihydropyrimidine dehydrogenase deficiency	18421352	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1314 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:155146400-155157600	Weak transcription	Right Atrium	heart
2	chr1:155146600-155163000	Weak transcription	Aorta	Aorta
3	chr1:155147600-155151600	Weak transcription	Osteobl	bone
4	chr1:155147600-155157200	Weak transcription	Right Ventricle	heart
5	chr1:155148400-155157800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr1:155148800-155154800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
7	chr1:155148800-155155200	Strong transcription	HUES48 Cell Line	embryonic stem cell
8	chr1:155149000-155152600	Enhancers	Stomach Mucosa	stomach
9	chr1:155149000-155155400	Strong transcription	HUES64 Cell Line	embryonic stem cell
10	chr1:155149200-155152200	Enhancers	Placenta	Placenta
11	chr1:155149200-155152800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
12	chr1:155149400-155153000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr1:155149400-155157400	Strong transcription	H9 Cell Line	embryonic stem cell
14	chr1:155149600-155152600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr1:155149600-155152600	Strong transcription	Primary hematopoietic stem cells	blood
16	chr1:155149600-155152600	Strong transcription	Muscle Satellite Cultured Cells	--
17	chr1:155149600-155152600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr1:155149600-155152600	Strong transcription	NHLF	lung
19	chr1:155149600-155152800	Strong transcription	iPS-15b Cell Line	embryonic stem cell
20	chr1:155149600-155152800	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr1:155149600-155152800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr1:155149600-155152800	Strong transcription	Primary T cells from cord blood	blood
23	chr1:155149600-155153200	Strong transcription	HUES6 Cell Line	embryonic stem cell
24	chr1:155149600-155155000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr1:155149600-155156600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr1:155149600-155156800	Strong transcription	H1 Cell Line	embryonic stem cell
27	chr1:155149600-155157400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
28	chr1:155149600-155157400	Weak transcription	Fetal Intestine Large	intestine
29	chr1:155149600-155158000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr1:155149600-155158200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr1:155149600-155158800	Weak transcription	A549	lung
32	chr1:155149600-155162000	Weak transcription	Rectal Smooth Muscle	rectum
33	chr1:155149600-155162600	Weak transcription	Small Intestine	intestine
34	chr1:155149600-155162800	Weak transcription	NHDF-Ad	bronchial
35	chr1:155149800-155151600	Weak transcription	Colonic Mucosa	Colon
36	chr1:155149800-155151800	Weak transcription	Rectal Mucosa Donor 31	rectum
37	chr1:155149800-155152600	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr1:155149800-155152600	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr1:155149800-155152600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
40	chr1:155149800-155152600	Strong transcription	Brain Substantia Nigra	brain
41	chr1:155149800-155152800	Strong transcription	Primary T helper cells PMA-I stimulated	--
42	chr1:155149800-155152800	Strong transcription	Brain Hippocampus Middle	brain
43	chr1:155149800-155152800	Strong transcription	Brain Inferior Temporal Lobe	brain
44	chr1:155149800-155152800	Strong transcription	Fetal Thymus	thymus
45	chr1:155149800-155153000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
46	chr1:155149800-155153000	Strong transcription	Thymus	Thymus
47	chr1:155149800-155153400	Weak transcription	Rectal Mucosa Donor 29	rectum
48	chr1:155149800-155154200	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr1:155149800-155154400	Weak transcription	Fetal Intestine Small	intestine
50	chr1:155149800-155154400	Weak transcription	Lung	lung

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