No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs12087284 |
chr1:172511969-172511970 |
Enhancers Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs544625148 |
chr1:172511978-172511979 |
Enhancers Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs563187671 |
chr1:172512050-172512051 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs367972572 |
chr1:172512083-172512084 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs533204796 |
chr1:172512091-172512092 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs544979700 |
chr1:172512109-172512110 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs560088427 |
chr1:172512174-172512175 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs527797500 |
chr1:172512180-172512181 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs376751927 |
chr1:172512191-172512192 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs116719536 |
chr1:172512261-172512262 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs148416057 |
chr1:172512281-172512282 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs142507323 |
chr1:172512284-172512285 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs74124232 |
chr1:172512292-172512293 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
14 |
rs571504915 |
chr1:172512296-172512297 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs376930295 |
chr1:172512313-172512314 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs74124233 |
chr1:172512382-172512383 |
Weak transcription Enhancers Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs553817417 |
chr1:172512411-172512412 |
Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs565636447 |
chr1:172512416-172512417 |
Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs115291158 |
chr1:172512451-172512452 |
Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs554646280 |
chr1:172512508-172512509 |
Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs140136938 |
chr1:172512614-172512615 |
Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs189371286 |
chr1:172512633-172512634 |
Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs556606542 |
chr1:172512640-172512641 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs180960508 |
chr1:172512725-172512726 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs369835061 |
chr1:172512728-172512729 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs72727516 |
chr1:172512733-172512734 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
27 |
rs565661528 |
chr1:172512791-172512792 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs111755666 |
chr1:172512797-172512798 |
Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs561426651 |
chr1:172512816-172512817 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs531441977 |
chr1:172512818-172512819 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs577125915 |
chr1:172512837-172512838 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs546135722 |
chr1:172512899-172512900 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs536201736 |
chr1:172512937-172512938 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs532455482 |
chr1:172512959-172512960 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs530398968 |
chr1:172512968-172512969 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs562891692 |
chr1:172512980-172512981 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs547662676 |
chr1:172512986-172512987 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs59521518 |
chr1:172512991-172512992 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs554555981 |
chr1:172512999-172513000 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs140903652 |
chr1:172513003-172513004 |
Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs149805616 |
chr1:172513059-172513060 |
Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs373070534 |
chr1:172513119-172513120 |
Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs201071815 |
chr1:172513124-172513125 |
Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs569710163 |
chr1:172513127-172513128 |
Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs553226622 |
chr1:172513335-172513336 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs536717760 |
chr1:172513361-172513362 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs542289859 |
chr1:172513363-172513364 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs12750740 |
chr1:172513444-172513445 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
49 |
rs577776461 |
chr1:172513447-172513448 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs370319694 |
chr1:172513468-172513469 |
Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|