Variant report

Variant nsv872643
Chromosome Location chr1:188931828-189128124
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:188936200-188936800 Enhancers iPS-18 Cell Line embryonic stem cell
2 chr1:188955600-188956400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr1:188955800-188956400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:188955800-188956400 Enhancers HUES6 Cell Line embryonic stem cell
5 chr1:188955800-188956600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:188956200-188956400 Enhancers HUES48 Cell Line embryonic stem cell
7 chr1:188956200-188956600 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr1:188956200-188956800 Enhancers iPS-15b Cell Line embryonic stem cell
9 chr1:188956400-188959200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:188956800-188961400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr1:188958800-188959400 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr1:188959200-188960000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:188959400-188959600 Enhancers HUES48 Cell Line embryonic stem cell
14 chr1:188959600-188961600 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr1:188961400-188962600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:188961400-188963000 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr1:188961600-188963000 Enhancers HUES48 Cell Line embryonic stem cell
18 chr1:188962000-188962600 Enhancers HUES6 Cell Line embryonic stem cell
19 chr1:188962000-188962600 Enhancers HUES64 Cell Line embryonic stem cell
20 chr1:188962200-188962600 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr1:188990000-188990800 Enhancers A549 lung
22 chr1:188990800-188991200 Flanking Active TSS A549 lung
23 chr1:188991200-188991800 Enhancers A549 lung
24 chr1:188991800-188996400 Weak transcription A549 lung
25 chr1:188996400-188996600 Active TSS A549 lung
26 chr1:188996600-188996800 Flanking Active TSS A549 lung
27 chr1:188996800-188997000 Enhancers A549 lung
28 chr1:189008000-189008600 Enhancers Fetal Lung lung
29 chr1:189015400-189015800 Enhancers Fetal Brain Female brain
30 chr1:189044400-189045000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:189055000-189055600 Enhancers Fetal Brain Male brain
32 chr1:189091000-189092000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:189091200-189091800 Enhancers Placenta Amnion Placenta Amnion
34 chr1:189098000-189102000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:189106200-189110600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:189110400-189111000 ZNF genes & repeats Pancreas Pancrea
37 chr1:189110600-189111000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:189111000-189118800 Weak transcription Pancreas Pancrea
39 chr1:189115600-189116600 Enhancers Brain Germinal Matrix brain
40 chr1:189118400-189120000 Active TSS Pancreatic Islets Pancreatic Islet
41 chr1:189118800-189119200 Active TSS iPS-15b Cell Line embryonic stem cell
42 chr1:189118800-189119200 Active TSS Liver Liver
43 chr1:189118800-189119200 Active TSS Gastric stomach
44 chr1:189118800-189119400 Active TSS Duodenum Mucosa Duodenum
45 chr1:189118800-189119400 Active TSS Fetal Intestine Large intestine
46 chr1:189118800-189119400 ZNF genes & repeats Pancreas Pancrea
47 chr1:189118800-189119400 Active TSS Rectal Mucosa Donor 29 rectum
48 chr1:189118800-189120200 Active TSS A549 lung
49 chr1:189118800-189121800 Active TSS K562 blood
50 chr1:189127200-189127600 Active TSS K562 blood

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