Variant report

Variant nsv872658
Chromosome Location chr1:189069537-189675416
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:287 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:189091000-189092000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
2 chr1:189091200-189091800 Enhancers Placenta Amnion Placenta Amnion
3 chr1:189098000-189102000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:189106200-189110600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:189110400-189111000 ZNF genes & repeats Pancreas Pancrea
6 chr1:189110600-189111000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:189111000-189118800 Weak transcription Pancreas Pancrea
8 chr1:189115600-189116600 Enhancers Brain Germinal Matrix brain
9 chr1:189118400-189120000 Active TSS Pancreatic Islets Pancreatic Islet
10 chr1:189118800-189119200 Active TSS iPS-15b Cell Line embryonic stem cell
11 chr1:189118800-189119200 Active TSS Liver Liver
12 chr1:189118800-189119200 Active TSS Gastric stomach
13 chr1:189118800-189119400 Active TSS Duodenum Mucosa Duodenum
14 chr1:189118800-189119400 Active TSS Fetal Intestine Large intestine
15 chr1:189118800-189119400 ZNF genes & repeats Pancreas Pancrea
16 chr1:189118800-189119400 Active TSS Rectal Mucosa Donor 29 rectum
17 chr1:189118800-189120200 Active TSS A549 lung
18 chr1:189118800-189121800 Active TSS K562 blood
19 chr1:189127200-189127600 Active TSS K562 blood
20 chr1:189152000-189152400 Enhancers Fetal Heart heart
21 chr1:189154000-189154600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:189154000-189154800 Enhancers HUES64 Cell Line embryonic stem cell
23 chr1:189154000-189155000 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr1:189154200-189154800 Enhancers HUES48 Cell Line embryonic stem cell
25 chr1:189154200-189155200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:189154400-189155000 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr1:189165000-189165200 Enhancers Pancreatic Islets Pancreatic Islet
28 chr1:189165600-189167200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:189174200-189174800 Enhancers Fetal Adrenal Gland Adrenal Gland
30 chr1:189175000-189175400 Enhancers A549 lung
31 chr1:189181800-189182600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr1:189182000-189182800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:189194000-189194800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
34 chr1:189194600-189194800 ZNF genes & repeats Gastric stomach
35 chr1:189196000-189196400 Active TSS Primary T killer memory cells from peripheral blood blood
36 chr1:189237000-189237200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
37 chr1:189237000-189237400 ZNF genes & repeats Liver Liver
38 chr1:189237200-189237800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
39 chr1:189237200-189238800 ZNF genes & repeats Adipose Nuclei Adipose
40 chr1:189280800-189281600 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr1:189281000-189281200 Enhancers HUES64 Cell Line embryonic stem cell
42 chr1:189281000-189281200 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr1:189281000-189281400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:189281000-189282200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:189281000-189283400 Enhancers K562 blood
46 chr1:189281200-189281600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:189281200-189282200 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr1:189281400-189281600 Enhancers iPS-18 Cell Line embryonic stem cell
49 chr1:189281400-189281800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:189281400-189282400 Weak transcription HUES64 Cell Line embryonic stem cell

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