Variant report

Variant nsv872859
Chromosome Location chr1:194377156-194590401
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:194376600-194380200 Weak transcription Fetal Lung lung
2 chr1:194380200-194380600 Enhancers Fetal Lung lung
3 chr1:194380600-194383200 Weak transcription Fetal Lung lung
4 chr1:194383200-194383400 ZNF genes & repeats Fetal Lung lung
5 chr1:194388800-194389200 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:194389200-194389600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:194389600-194390000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:194390000-194400600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:194400400-194400600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:194406600-194406800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:194411000-194413800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:194411400-194411800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr1:194411400-194412000 Enhancers Brain Substantia Nigra brain
14 chr1:194411400-194412200 Enhancers Cortex derived primary cultured neurospheres brain
15 chr1:194411400-194413400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:194411600-194412000 Enhancers Brain Angular Gyrus brain
17 chr1:194411600-194412000 Enhancers Brain Anterior Caudate brain
18 chr1:194411600-194412000 Enhancers Brain Hippocampus Middle brain
19 chr1:194411600-194412000 Enhancers Brain Inferior Temporal Lobe brain
20 chr1:194411600-194412400 Enhancers Brain Germinal Matrix brain
21 chr1:194411600-194412400 Enhancers Fetal Brain Female brain
22 chr1:194411800-194412000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:194412000-194412400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
24 chr1:194412000-194412400 Active TSS Brain Substantia Nigra brain
25 chr1:194412000-194412600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:194412000-194412600 Active TSS Brain Angular Gyrus brain
27 chr1:194412000-194412800 Active TSS Brain Anterior Caudate brain
28 chr1:194412000-194412800 Active TSS Brain Hippocampus Middle brain
29 chr1:194412200-194412400 Active TSS Brain Cingulate Gyrus brain
30 chr1:194412200-194412600 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr1:194412200-194412600 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr1:194412200-194412600 Active TSS Brain Inferior Temporal Lobe brain
33 chr1:194412200-194412800 Enhancers iPS-20b Cell Line embryonic stem cell
34 chr1:194412400-194412600 Flanking Active TSS Brain Cingulate Gyrus brain
35 chr1:194412400-194412600 Flanking Active TSS Brain Substantia Nigra brain
36 chr1:194412400-194413200 Weak transcription Brain Germinal Matrix brain
37 chr1:194412600-194412800 Enhancers Brain Cingulate Gyrus brain
38 chr1:194412600-194413200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:194412600-194413600 Enhancers Brain Substantia Nigra brain
40 chr1:194412600-194413800 Enhancers Cortex derived primary cultured neurospheres brain
41 chr1:194412800-194413400 Enhancers Brain Anterior Caudate brain
42 chr1:194413200-194413400 Enhancers Brain Germinal Matrix brain
43 chr1:194413200-194413800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:194413600-194413800 Enhancers Brain Inferior Temporal Lobe brain
45 chr1:194437200-194437600 Active TSS Right Atrium heart
46 chr1:194443200-194444400 Enhancers Cortex derived primary cultured neurospheres brain
47 chr1:194443200-194444400 Enhancers Fetal Brain Male brain
48 chr1:194443200-194445800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
49 chr1:194443800-194444200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:194444000-194444200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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