Variant report

Variant nsv872951
Chromosome Location chr1:196027872-196166278
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:247 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:196032200-196032600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:196032400-196033200 Enhancers A549 lung
3 chr1:196032600-196033400 Enhancers Hela-S3 cervix
4 chr1:196032600-196033400 Enhancers NH-A brain
5 chr1:196032800-196033600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:196033000-196033400 Enhancers Muscle Satellite Cultured Cells --
7 chr1:196033000-196033800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:196033200-196033600 Enhancers HMEC breast
9 chr1:196047800-196048000 Enhancers A549 lung
10 chr1:196047800-196048400 Enhancers Muscle Satellite Cultured Cells --
11 chr1:196048000-196048400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:196048000-196048400 Flanking Active TSS A549 lung
13 chr1:196048000-196048400 Enhancers HMEC breast
14 chr1:196048000-196048400 Enhancers NHEK skin
15 chr1:196055200-196055400 Enhancers ES-WA7 Cell Line embryonic stem cell
16 chr1:196057600-196058200 Enhancers NHDF-Ad bronchial
17 chr1:196058800-196059600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:196059200-196059400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:196059600-196060800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:196059600-196061000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr1:196060800-196061600 Enhancers Primary hematopoietic stem cells short term culture blood
22 chr1:196060800-196061600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:196060800-196061800 Enhancers Fetal Brain Male brain
24 chr1:196061000-196061400 Enhancers Primary hematopoietic stem cells blood
25 chr1:196061000-196061800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:196064000-196064200 Enhancers Fetal Stomach stomach
27 chr1:196064200-196065600 Weak transcription Fetal Stomach stomach
28 chr1:196065600-196065800 Enhancers Fetal Stomach stomach
29 chr1:196065600-196067600 Enhancers Fetal Lung lung
30 chr1:196065800-196066600 Weak transcription Fetal Stomach stomach
31 chr1:196066000-196067400 Enhancers Brain Hippocampus Middle brain
32 chr1:196066000-196067600 Enhancers Brain Inferior Temporal Lobe brain
33 chr1:196066200-196068200 Enhancers Brain Cingulate Gyrus brain
34 chr1:196066400-196067000 Enhancers Brain Germinal Matrix brain
35 chr1:196066400-196067200 Enhancers Brain Angular Gyrus brain
36 chr1:196066400-196067600 Enhancers Brain Substantia Nigra brain
37 chr1:196066400-196067800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:196066600-196067000 Enhancers Fetal Stomach stomach
39 chr1:196066600-196067600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:196066600-196067600 Enhancers Cortex derived primary cultured neurospheres brain
41 chr1:196066600-196067800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
42 chr1:196066800-196067800 Enhancers Brain Anterior Caudate brain
43 chr1:196067000-196067600 Weak transcription Brain Germinal Matrix brain
44 chr1:196067000-196067800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
45 chr1:196067200-196067400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:196067400-196069200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:196067600-196067800 Enhancers Brain Germinal Matrix brain
48 chr1:196069200-196070400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:196073800-196074200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
50 chr1:196074200-196078000 Weak transcription HUES6 Cell Line embryonic stem cell

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