Variant report

Variant	nsv872957
Chromosome Location	chr1:196347066-196411281
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:364)
CpG islands
(count:61)
Chromatin interactive
region (count:23)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:364 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:196407397-196407967	HepG2	liver:	n/a	n/a
2	ARID3A	chr1:196406898-196407098	HepG2	liver:	n/a	n/a
3	ATF1	chr1:196387028-196387094	K562	blood:	n/a	n/a
4	ATF1	chr1:196407672-196407858	K562	blood:	n/a	n/a
5	BCL3	chr1:196407470-196407932	A549	lung:	n/a	chr1:196407582-196407591
6	BCL3	chr1:196407344-196407987	A549	lung:	n/a	chr1:196407582-196407591
7	BRCA1	chr1:196367855-196367981	Hela-S3	cervix:	n/a	n/a
8	CCNT2	chr1:196407669-196407890	K562	blood:	n/a	n/a
9	CEBPB	chr1:196407401-196407879	A549	lung:	n/a	chr1:196407626-196407637 chr1:196407627-196407638 chr1:196407625-196407642
10	CEBPB	chr1:196368807-196369027	A549	lung:	n/a	n/a
11	CEBPB	chr1:196407402-196407885	HepG2	liver:	n/a	chr1:196407626-196407637 chr1:196407627-196407638 chr1:196407625-196407642
12	CEBPB	chr1:196368733-196369150	HepG2	liver:	n/a	n/a
13	CEBPB	chr1:196404848-196404958	A549	lung:	n/a	n/a
14	CEBPB	chr1:196407462-196407817	HepG2	liver:	n/a	chr1:196407626-196407637 chr1:196407627-196407638 chr1:196407625-196407642
15	CEBPB	chr1:196407466-196407875	A549	lung:	n/a	chr1:196407626-196407637 chr1:196407627-196407638 chr1:196407625-196407642
16	CEBPB	chr1:196407326-196408041	A549	lung:	n/a	chr1:196407626-196407637 chr1:196407627-196407638 chr1:196407625-196407642
17	CEBPB	chr1:196376262-196376879	Hela-S3	cervix:	n/a	chr1:196376644-196376655 chr1:196376642-196376655 chr1:196376644-196376655
18	CEBPB	chr1:196368429-196369163	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr1:196370623-196370979	HepG2	liver:	n/a	n/a
20	CEBPB	chr1:196375055-196375195	HepG2	liver:	n/a	n/a
21	CEBPB	chr1:196376545-196376780	IMR90	lung:	n/a	chr1:196376644-196376655 chr1:196376642-196376655 chr1:196376644-196376655
22	CEBPB	chr1:196407551-196407754	HepG2	liver:	n/a	chr1:196407626-196407637 chr1:196407627-196407638 chr1:196407625-196407642
23	CREB1	chr1:196407625-196407827	A549	lung:	n/a	n/a
24	CREB1	chr1:196407458-196407930	HepG2	liver:	n/a	n/a
25	CREB1	chr1:196407392-196407942	HepG2	liver:	n/a	n/a
26	CTCF	chr1:196394800-196394950	MCF-7	breast:	n/a	n/a
27	CTCF	chr1:196394720-196394870	HVMF	connective:	n/a	n/a
28	CTCF	chr1:196394760-196394910	HMF	breast:	n/a	n/a
29	CTCF	chr1:196394540-196394690	HCM	heart:	n/a	n/a
30	CTCF	chr1:196394760-196394910	HPF	lung:	n/a	n/a
31	CTCF	chr1:196394780-196394930	HCM	heart:	n/a	n/a
32	CTCF	chr1:196394760-196394910	NHEK	skin:	n/a	n/a
33	CTCF	chr1:196394780-196394930	NHDF-neo	bronchial:	n/a	n/a
34	CTCF	chr1:196394800-196394950	HPAF	blood vessel:	n/a	n/a
35	CTCF	chr1:196394700-196394850	HMEC	breast:	n/a	n/a
36	CTCF	chr1:196394960-196395110	HPAF	blood vessel:	n/a	n/a
37	CTCF	chr1:196394840-196394990	HFF	foreskin:	n/a	n/a
38	CTCF	chr1:196394800-196394950	AG04450	lung:	n/a	n/a
39	CTCF	chr1:196394740-196394970	HCT-116	colon:	n/a	n/a
40	CTCF	chr1:196394740-196394890	HMF	breast:	n/a	n/a
41	CTCF	chr1:196394800-196394950	RPTEC	kidney:	n/a	n/a
42	CTCF	chr1:196394860-196395010	HRE	kidney:	n/a	n/a
43	CTCF	chr1:196394860-196395010	HCM	heart:	n/a	n/a
44	CTCF	chr1:196394740-196394890	HA-sp	spinal cord:	n/a	n/a
45	CTCF	chr1:196394840-196394990	HEK293	kidney:	n/a	n/a
46	CTCF	chr1:196394760-196394910	RPTEC	kidney:	n/a	n/a
47	CTCF	chr1:196394800-196394950	HRE	kidney:	n/a	n/a
48	CTCF	chr1:196394820-196394970	NHEK	skin:	n/a	n/a
49	CTCF	chr1:196386007-196386053	GM10248	blood:	n/a	n/a
50	CTCF	chr1:196370185-196370215	GM20000	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:196370245-196370295	MCF10A-Er-Src	breast:	n/a
2	chr1:196370245-196370295	H1-hESC	embryonic stem cell:	embryo
3	chr1:196370245-196370295	CMK	blood:	n/a
4	chr1:196370245-196370295	Caco-2	colon:	n/a
5	chr1:196370245-196370295	NH-A	brain:	n/a
6	chr1:196370245-196370295	ProgFib	skin:	n/a
7	chr1:196370245-196370295	A549	lung:	n/a
8	chr1:196370245-196370295	MCF-7	breast:	n/a
9	chr1:196370245-196370295	AG09319	gingival:	n/a
10	chr1:196370245-196370295	HEEpiC	esophagus:	n/a
11	chr1:196370245-196370295	HepG2	liver:	n/a
12	chr1:196370245-196370295	U87	brain:	n/a
13	chr1:196370245-196370295	Hela-S3	cervix:	n/a
14	chr1:196370245-196370295	ovcar-3	ovarian:	n/a
15	chr1:196370245-196370295	HAEpiC	amniotic membrane:	n/a
16	chr1:196370245-196370295	AG09309	skin:	n/a
17	chr1:196370245-196370295	HMEC	breast:	n/a
18	chr1:196370245-196370295	NHDF-neo	bronchial:	n/a
19	chr1:196370245-196370295	GM06990	blood:	n/a
20	chr1:196370245-196370295	PANC-1	pancreas:	n/a
21	chr1:196370245-196370295	T-47D	breast:	n/a
22	chr1:196370245-196370295	PrEC	prostate:	n/a
23	chr1:196370245-196370295	HEK293	kidney:	embryo
24	chr1:196370245-196370295	SK-N-MC	brain:	n/a
25	chr1:196370245-196370295	NT2-D1	testis:	n/a
26	chr1:196370245-196370295	NHBE	bronchial:	n/a
27	chr1:196370245-196370295	SK-N-SH_RA	brain:	n/a
28	chr1:196370245-196370295	ECC-1	luminal epithelium:	n/a
29	chr1:196370245-196370295	IMR90	lung:	fetal
30	chr1:196370245-196370295	HUVEC	blood vessel:	n/a
31	chr1:196370245-196370295	HRPEpiC	eye:	n/a
32	chr1:196370245-196370295	HRE	kidney:	n/a
33	chr1:196370245-196370295	HPAEpiC	pulmonary alveolar:	n/a
34	chr1:196370245-196370295	K562	blood:	n/a
35	chr1:196370245-196370295	RPTEC	kidney:	n/a
36	chr1:196370245-196370295	HNPCEpiC	eye:	n/a
37	chr1:196370245-196370295	LNCaP	prostate:	n/a
38	chr1:196370245-196370295	GM12892	blood:	n/a
39	chr1:196370245-196370295	HCT-116	colon:	n/a
40	chr1:196370245-196370295	NB4	blood:	n/a
41	chr1:196370245-196370295	HCF	heart:	n/a
42	chr1:196370245-196370295	Jurkat	blood:	n/a
43	chr1:196370245-196370295	AG04449	skin:	fetal
44	chr1:196370245-196370295	AG10803	skin:	n/a
45	chr1:196370245-196370295	AG04450	lung:	fetal
46	chr1:196370245-196370295	HL-60	blood:	n/a
47	chr1:196370245-196370295	HRCEpiC	kidney:	n/a
48	chr1:196370245-196370295	PFSK-1	brain:	n/a
49	chr1:196370245-196370295	GM19239	blood:	n/a
50	chr1:196370245-196370295	BJ	skin:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:196352575..196354631-chr1:196357298..196358845,2	K562	blood:
2	chr1:196373223..196374737-chr1:196383662..196386245,2	MCF-7	breast:
3	chr1:196366632..196369217-chr1:212900913..212902488,2	K562	blood:
4	chr1:196410955..196413395-chr1:196417085..196419825,2	MCF-7	breast:
5	chr1:196361773..196364376-chr1:196366014..196367979,3	K562	blood:
6	chr1:196364017..196366304-chr1:196368706..196370485,2	K562	blood:
7	chr1:196361773..196364376-chr1:196366014..196367979,3	K562	blood:
8	chr1:196350682..196352387-chr1:196355306..196358065,2	K562	blood:
9	chr1:196407532..196410061-chr1:196416342..196417933,2	K562	blood:
10	chr1:196340059..196341876-chr1:196348067..196350218,2	K562	blood:
11	chr1:196349642..196352554-chr1:196364645..196367133,2	K562	blood:
12	chr1:196360024..196360898-chr9:82652545..82653460,2	MCF-7	breast:
13	chr1:196350682..196352387-chr1:196355306..196358065,2	K562	blood:
14	chr1:196373223..196374737-chr1:196383662..196386245,2	MCF-7	breast:
15	chr1:196408264..196409800-chr1:196411591..196414146,2	K562	blood:
16	chr1:196349642..196352554-chr1:196364645..196367133,2	K562	blood:
17	chr1:196372518..196376500-chr1:196378398..196382162,4	K562	blood:
18	chr1:196342199..196343885-chr1:196346631..196348426,2	K562	blood:
19	chr1:196355400..196357247-chr1:196358830..196361358,2	K562	blood:
20	chr1:196372518..196376500-chr1:196378398..196382162,4	K562	blood:
21	chr1:196364017..196366304-chr1:196368706..196370485,2	K562	blood:
22	chr1:196352575..196354631-chr1:196357298..196358845,2	K562	blood:
23	chr1:196355400..196357247-chr1:196358830..196361358,2	K562	blood:

No data

Variant related genes	Relation type
KCNT2	TF binding region
KCNT2	CpG island

Extended variants
information (count: 2390 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:2390 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12127589	chr1:196347066-196347067	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs113018560	chr1:196347076-196347077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs538846395	chr1:196347079-196347080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs141689620	chr1:196347082-196347083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs536574692	chr1:196347118-196347119	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs554817651	chr1:196347171-196347172	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs527724839	chr1:196347212-196347213	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs12405050	chr1:196347240-196347241	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs537036376	chr1:196347241-196347242	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs12135314	chr1:196347257-196347258	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs577272271	chr1:196347276-196347277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs368686874	chr1:196347286-196347287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs541489005	chr1:196347311-196347312	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs184392556	chr1:196347318-196347319	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs572190553	chr1:196347345-196347346	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs542585308	chr1:196347437-196347438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs188780598	chr1:196347487-196347488	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs531595212	chr1:196347509-196347510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs181292597	chr1:196347572-196347573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs542234100	chr1:196347587-196347588	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs150550843	chr1:196347597-196347598	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs532123171	chr1:196347645-196347646	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs560908300	chr1:196347667-196347668	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs551998390	chr1:196347723-196347724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs576258512	chr1:196347724-196347725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs377489218	chr1:196347765-196347766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs558365539	chr1:196347804-196347805	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs12407653	chr1:196347810-196347811	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs139569260	chr1:196347837-196347838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs149731351	chr1:196347860-196347861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs111659768	chr1:196347922-196347923	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs112455099	chr1:196347940-196347941	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs563888936	chr1:196347943-196347944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs113930603	chr1:196347957-196347958	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs552177953	chr1:196347975-196347976	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs12729822	chr1:196347991-196347992	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs12725793	chr1:196348006-196348007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs570793549	chr1:196348071-196348072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs73067641	chr1:196348080-196348081	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs34964094	chr1:196348096-196348097	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs532393587	chr1:196348121-196348122	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs553410667	chr1:196348288-196348289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs569534967	chr1:196348298-196348299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs553309048	chr1:196348348-196348349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs377442127	chr1:196348370-196348371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs572195226	chr1:196348379-196348380	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs146753610	chr1:196348423-196348424	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs113176561	chr1:196348425-196348426	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs554757663	chr1:196348483-196348484	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs576426127	chr1:196348521-196348522	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	20688739	CNVD
Breast cancer	21611746	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	19010865	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Mental retardation	21062444	CNVD
Liver carcinoma	19366792	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Breast cancer	22522925	CNVD
Intellectual disability	21811512	CNVD

Chromatin state (count:299 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:196343400-196377200	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr1:196343600-196362200	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr1:196343600-196369200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr1:196343800-196362200	Weak transcription	Liver	Liver
5	chr1:196346200-196348000	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr1:196346200-196349400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr1:196346200-196355600	Weak transcription	Fetal Lung	lung
8	chr1:196348600-196348800	Enhancers	Rectal Smooth Muscle	rectum
9	chr1:196348800-196349200	Enhancers	Fetal Brain Male	brain
10	chr1:196348800-196349400	Weak transcription	Rectal Smooth Muscle	rectum
11	chr1:196349200-196349400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr1:196349400-196350000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr1:196349400-196350200	Enhancers	Rectal Smooth Muscle	rectum
14	chr1:196349400-196368600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr1:196349600-196350000	Enhancers	Pancreatic Islets	Pancreatic Islet
16	chr1:196349600-196350200	Active TSS	Fetal Brain Female	brain
17	chr1:196350000-196350200	Bivalent Enhancer	Pancreatic Islets	Pancreatic Islet
18	chr1:196350800-196351000	Enhancers	Skeletal Muscle Female	skeletal muscle
19	chr1:196351600-196353000	Enhancers	HepG2	liver
20	chr1:196353600-196354000	Active TSS	Fetal Muscle Trunk	muscle
21	chr1:196354000-196354400	Enhancers	Fetal Heart	heart
22	chr1:196354000-196354400	Active TSS	Fetal Muscle Leg	muscle
23	chr1:196354400-196354600	Enhancers	HSMMtube	muscle
24	chr1:196354400-196354800	Flanking Active TSS	Fetal Heart	heart
25	chr1:196354800-196355000	Enhancers	Fetal Heart	heart
26	chr1:196355000-196355200	Flanking Active TSS	Fetal Heart	heart
27	chr1:196355000-196356600	Weak transcription	HSMMtube	muscle
28	chr1:196356400-196357400	Enhancers	Osteobl	bone
29	chr1:196356400-196375600	Weak transcription	Fetal Kidney	kidney
30	chr1:196356600-196357400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr1:196356600-196357400	Enhancers	HSMM	muscle
32	chr1:196356600-196357400	Enhancers	HSMMtube	muscle
33	chr1:196356600-196357400	Enhancers	NH-A	brain
34	chr1:196357400-196362400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr1:196357400-196362600	Weak transcription	HSMM	muscle
36	chr1:196357400-196363200	Weak transcription	HSMMtube	muscle
37	chr1:196358000-196393800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
38	chr1:196361600-196362600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr1:196361800-196362800	Weak transcription	Fetal Brain Male	brain
40	chr1:196362000-196362200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr1:196362200-196363000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr1:196362200-196363200	Enhancers	HUES48 Cell Line	embryonic stem cell
43	chr1:196362200-196363400	Enhancers	Muscle Satellite Cultured Cells	--
44	chr1:196362200-196363600	Enhancers	Liver	Liver
45	chr1:196362400-196362600	Enhancers	NHDF-Ad	bronchial
46	chr1:196362400-196363400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr1:196362600-196363000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr1:196362600-196363000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr1:196362600-196363200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr1:196362600-196363200	Flanking Active TSS	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links