Variant report

Variant	nsv873349
Chromosome Location	chr1:239475925-239587512
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr1:239512029-239512060	K562	blood:	n/a	n/a
2	ATF1	chr1:239571294-239571413	K562	blood:	n/a	n/a
3	ATF1	chr1:239582959-239582960	K562	blood:	n/a	n/a
4	BACH1	chr1:239549812-239550171	H1-hESC	embryonic stem cell:	n/a	n/a
5	CEBPB	chr1:239549707-239549979	H1-hESC	embryonic stem cell:	n/a	n/a
6	CEBPB	chr1:239552222-239552477	A549	lung:	n/a	chr1:239552465-239552477 chr1:239552379-239552392
7	CEBPB	chr1:239478320-239478939	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr1:239587340-239587627	ECC-1	luminal epithelium:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
9	CEBPB	chr1:239587331-239587639	A549	lung:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
10	CEBPB	chr1:239513986-239514194	A549	lung:	n/a	chr1:239514022-239514035
11	CEBPB	chr1:239587255-239587634	H1-hESC	embryonic stem cell:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
12	CEBPB	chr1:239587283-239587638	Hela-S3	cervix:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
13	CEBPB	chr1:239587365-239587610	MCF-7	breast:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
14	CEBPB	chr1:239522649-239522780	A549	lung:	n/a	chr1:239522754-239522767 chr1:239522754-239522765 chr1:239522754-239522765
15	CEBPB	chr1:239496705-239497062	HepG2	liver:	n/a	chr1:239496870-239496883 chr1:239496872-239496883 chr1:239496872-239496881 chr1:239496870-239496881 chr1:239496870-239496883
16	CEBPB	chr1:239587310-239587653	A549	lung:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
17	CEBPB	chr1:239512338-239512591	HepG2	liver:	n/a	chr1:239512449-239512462
18	CEBPB	chr1:239478325-239478922	H1-hESC	embryonic stem cell:	n/a	n/a
19	CEBPB	chr1:239587306-239587625	K562	blood:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
20	CEBPB	chr1:239587267-239587639	IMR90	lung:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
21	CEBPB	chr1:239587268-239587619	A549	lung:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
22	CEBPB	chr1:239587278-239587635	HepG2	liver:	n/a	chr1:239587442-239587455 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587443-239587454 chr1:239587444-239587453 chr1:239587444-239587453 chr1:239587442-239587455
23	CEBPB	chr1:239552208-239552537	HepG2	liver:	n/a	chr1:239552465-239552477 chr1:239552379-239552392
24	CHD1	chr1:239550036-239550282	H1-hESC	embryonic stem cell:	n/a	n/a
25	CHD1	chr1:239550579-239550595	H1-hESC	embryonic stem cell:	n/a	n/a
26	CHD2	chr1:239549614-239550093	H1-hESC	embryonic stem cell:	n/a	chr1:239549736-239549746
27	CHD2	chr1:239571319-239571529	K562	blood:	n/a	n/a
28	CTBP2	chr1:239549362-239551324	H1-hESC	embryonic stem cell:	n/a	n/a
29	CTCF	chr1:239526420-239526570	Caco-2	colon:	n/a	n/a
30	CTCF	chr1:239568880-239569030	GM12872	blood:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
31	CTCF	chr1:239568920-239569070	BJ	skin:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
32	CTCF	chr1:239568900-239569050	GM12875	blood:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
33	CTCF	chr1:239568940-239569090	HAc	cerebellar:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
34	CTCF	chr1:239549660-239549810	HCM	heart:	n/a	n/a
35	CTCF	chr1:239568880-239569030	A549	lung:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
36	CTCF	chr1:239568880-239569030	AG04449	skin:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
37	CTCF	chr1:239568894-239569070	LNCaP	prostate:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
38	CTCF	chr1:239568920-239569070	HBMEC	blood vessel:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
39	CTCF	chr1:239568820-239568970	GM12865	blood:	n/a	n/a
40	CTCF	chr1:239568840-239568990	BJ	skin:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
41	CTCF	chr1:239568548-239569274	A549	lung:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
42	CTCF	chr1:239569025-239569027	GM10248	blood:	n/a	n/a
43	CTCF	chr1:239568900-239569050	HPAF	blood vessel:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
44	CTCF	chr1:239568480-239568630	HRPEpiC	eye:	n/a	n/a
45	CTCF	chr1:239549900-239550050	AG09309	skin:	n/a	n/a
46	CTCF	chr1:239568880-239569030	AG04450	lung:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
47	CTCF	chr1:239568900-239569050	AG09319	gingival:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
48	CTCF	chr1:239568900-239569050	Hela-S3	cervix:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
49	CTCF	chr1:239568920-239569070	RPTEC	kidney:	n/a	chr1:239568955-239568973 chr1:239568957-239568978 chr1:239568956-239568972
50	CTCF	chr1:239539180-239539330	HEK293	kidney:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:239550283-239550333	ECC-1	luminal epithelium:	n/a
2	chr1:239550283-239550333	ECC-1	luminal epithelium:	n/a
3	chr1:239552128-239552178	K562	blood:	n/a
4	chr1:239552128-239552178	SKMC	muscle:	n/a
5	chr1:239550578-239550628	GM12878	blood:	n/a
6	chr1:239554854-239554904	HNPCEpiC	eye:	n/a
7	chr1:239550578-239550628	SK-N-SH_RA	brain:	n/a
8	chr1:239550303-239550353	H1-hESC	embryonic stem cell:	embryo
9	chr1:239549830-239549880	PFSK-1	brain:	n/a
10	chr1:239550177-239550227	GM12892	blood:	n/a
11	chr1:239550303-239550353	BE2_C	brain:	n/a
12	chr1:239546278-239546328	AoSMC	blood vessel:	n/a
13	chr1:239549853-239549903	BE2_C	brain:	n/a
14	chr1:239549798-239549848	AoSMC	blood vessel:	n/a
15	chr1:239550177-239550227	K562	blood:	n/a
16	chr1:239550303-239550353	K562	blood:	n/a
17	chr1:239549600-239549650	IMR90	lung:	fetal
18	chr1:239550578-239550628	GM12891	blood:	n/a
19	chr1:239551249-239551299	GM12892	blood:	n/a
20	chr1:239549798-239549848	Caco-2	colon:	n/a
21	chr1:239551249-239551299	HepG2	liver:	n/a
22	chr1:239551177-239551227	HepG2	liver:	n/a
23	chr1:239549798-239549848	HRCEpiC	kidney:	n/a
24	chr1:239550578-239550628	ProgFib	skin:	n/a
25	chr1:239549830-239549880	CMK	blood:	n/a
26	chr1:239549626-239549676	HRE	kidney:	n/a
27	chr1:239554854-239554904	GM06990	blood:	n/a
28	chr1:239549626-239549676	HEEpiC	esophagus:	n/a
29	chr1:239551177-239551227	HL-60	blood:	n/a
30	chr1:239550578-239550628	GM12892	blood:	n/a
31	chr1:239549830-239549880	GM19239	blood:	n/a
32	chr1:239549577-239549627	RPTEC	kidney:	n/a
33	chr1:239550177-239550227	HRCEpiC	kidney:	n/a
34	chr1:239550535-239550585	ECC-1	luminal epithelium:	n/a
35	chr1:239551177-239551227	Caco-2	colon:	n/a
36	chr1:239549600-239549650	U87	brain:	n/a
37	chr1:239552128-239552178	NHDF-neo	bronchial:	n/a
38	chr1:239550283-239550333	HCM	heart:	n/a
39	chr1:239485905-239485955	HCF	heart:	n/a
40	chr1:239549798-239549848	GM12878	blood:	n/a
41	chr1:239551177-239551227	IMR90	lung:	fetal
42	chr1:239549600-239549650	LNCaP	prostate:	n/a
43	chr1:239551040-239551090	HIPEpiC	eye:	n/a
44	chr1:239550535-239550585	HEK293	kidney:	embryo
45	chr1:239552128-239552178	U87	brain:	n/a
46	chr1:239550578-239550628	BE2_C	brain:	n/a
47	chr1:239546278-239546328	SKMC	muscle:	n/a
48	chr1:239485905-239485955	HIPEpiC	eye:	n/a
49	chr1:239551249-239551299	PFSK-1	brain:	n/a
50	chr1:239550283-239550333	HNPCEpiC	eye:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:239568368..239569174-chr1:240061173..240062000,5	MCF-7	breast:
2	chr1:239525984..239528866-chr1:239536104..239539077,2	K562	blood:
3	chr1:239525984..239528866-chr1:239536104..239539077,2	K562	blood:
4	chr1:239568673..239569405-chr1:239927263..239928086,2	MCF-7	breast:
5	chr1:239568492..239569620-chr1:240060954..240062072,4	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHRM3-1	chr1:239571520-239571549	NONHSAT010473
2	lnc-CHRM3-1	chr1:239550010-239550527	NONHSAT139940
3	lnc-CHRM3-1	chr1:239549865-239550527	NONHSAT010470
4	lnc-CHRM3-1	chr1:239550010-239550527	NONHSAT010471
5	lnc-CHRM3-1	chr1:239550220-239550527	NONHSAT010472

Variant related genes	Relation type
CHRM3	TF binding region
CHRM3	CpG island

Extended variants
information (count: 3398 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:3398 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10495431	chr1:239475925-239475926	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs549452033	chr1:239475995-239475996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs114636747	chr1:239476034-239476035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs377524332	chr1:239476040-239476041	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs553056508	chr1:239476042-239476043	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs147317910	chr1:239476044-239476045	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs371872298	chr1:239476054-239476055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs187699304	chr1:239476057-239476058	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs16838262	chr1:239476075-239476076	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs575907023	chr1:239476076-239476077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs542806147	chr1:239476084-239476085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs4233476	chr1:239476141-239476142	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs6692301	chr1:239476145-239476146	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs550818495	chr1:239476162-239476163	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs141032694	chr1:239476198-239476199	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs564514923	chr1:239476199-239476200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs532303731	chr1:239476215-239476216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs544094021	chr1:239476226-239476227	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs76139048	chr1:239476228-239476229	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs76440062	chr1:239476321-239476322	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs548042715	chr1:239476323-239476324	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs374663669	chr1:239476324-239476325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs538288660	chr1:239476333-239476334	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs143360050	chr1:239476365-239476366	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs528550413	chr1:239476366-239476367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs6703608	chr1:239476369-239476370	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs6695112	chr1:239476381-239476382	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs35075348	chr1:239476412-239476413	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs534346983	chr1:239476425-239476426	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs12239974	chr1:239476494-239476495	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs577128306	chr1:239476657-239476658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs10925868	chr1:239476669-239476670	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs557263405	chr1:239476677-239476678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs536867239	chr1:239476706-239476707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs370908391	chr1:239476759-239476760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs114264991	chr1:239476780-239476781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs182149607	chr1:239476852-239476853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs10925869	chr1:239476853-239476854	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs74149023	chr1:239476898-239476899	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs576429157	chr1:239476941-239476942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs543761117	chr1:239476949-239476950	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs139056163	chr1:239476965-239476966	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs371834604	chr1:239477035-239477036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs542031317	chr1:239477060-239477061	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs377745692	chr1:239477069-239477070	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs560069005	chr1:239477086-239477087	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs72752692	chr1:239477107-239477108	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs528620718	chr1:239477151-239477152	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs547111983	chr1:239477174-239477175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs187984862	chr1:239477191-239477192	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Hepatocellular carcinoma	16750200	CNVD
Arrhythmogenic right ventricular cardiomyopathy	17576883	CNVD
Multiple myeloma	16616336	CNVD
Developmental delay	21147756	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:691 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:239472600-239478200	Weak transcription	Fetal Intestine Small	intestine
2	chr1:239472600-239485600	Weak transcription	Pancreas	Pancrea
3	chr1:239478200-239478600	Enhancers	Fetal Intestine Small	intestine
4	chr1:239478200-239479400	Active TSS	Liver	Liver
5	chr1:239478200-239479400	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr1:239478400-239479200	Active TSS	Duodenum Mucosa	Duodenum
7	chr1:239478600-239479000	Active TSS	Fetal Intestine Large	intestine
8	chr1:239478600-239479000	Active TSS	Fetal Intestine Small	intestine
9	chr1:239478600-239479000	Active TSS	Stomach Mucosa	stomach
10	chr1:239478600-239479600	Enhancers	Rectal Mucosa Donor 31	rectum
11	chr1:239478800-239479000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr1:239479000-239479200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr1:239479000-239479200	Weak transcription	Fetal Intestine Large	intestine
14	chr1:239479000-239479400	Enhancers	Rectal Mucosa Donor 29	rectum
15	chr1:239479000-239481200	Enhancers	Fetal Intestine Small	intestine
16	chr1:239479200-239480200	Weak transcription	Duodenum Mucosa	Duodenum
17	chr1:239479200-239480200	Enhancers	Fetal Intestine Large	intestine
18	chr1:239479200-239480400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr1:239479400-239479800	Enhancers	Liver	Liver
20	chr1:239479400-239480400	Enhancers	Sigmoid Colon	Sigmoid Colon
21	chr1:239480200-239480400	Enhancers	Duodenum Mucosa	Duodenum
22	chr1:239480200-239480600	Weak transcription	Fetal Intestine Large	intestine
23	chr1:239480400-239485200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr1:239480600-239481600	Enhancers	Fetal Intestine Large	intestine
25	chr1:239483000-239483600	Enhancers	Fetal Heart	heart
26	chr1:239485200-239485600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr1:239485600-239485800	Enhancers	Pancreas	Pancrea
28	chr1:239486400-239486800	Enhancers	iPS-18 Cell Line	embryonic stem cell
29	chr1:239499000-239499400	Enhancers	Fetal Intestine Large	intestine
30	chr1:239499200-239499400	Enhancers	Duodenum Mucosa	Duodenum
31	chr1:239499200-239499400	Enhancers	Sigmoid Colon	Sigmoid Colon
32	chr1:239499200-239502600	Enhancers	Fetal Intestine Small	intestine
33	chr1:239499400-239500600	Weak transcription	Fetal Intestine Large	intestine
34	chr1:239499600-239502000	Weak transcription	Sigmoid Colon	Sigmoid Colon
35	chr1:239500600-239501200	Weak transcription	Duodenum Mucosa	Duodenum
36	chr1:239500600-239502600	Enhancers	Fetal Intestine Large	intestine
37	chr1:239501200-239501400	Enhancers	Duodenum Mucosa	Duodenum
38	chr1:239501200-239502400	Enhancers	Rectal Mucosa Donor 31	rectum
39	chr1:239501400-239501600	Flanking Active TSS	Duodenum Mucosa	Duodenum
40	chr1:239501600-239502000	Active TSS	Duodenum Mucosa	Duodenum
41	chr1:239502000-239502200	Flanking Active TSS	Duodenum Mucosa	Duodenum
42	chr1:239502000-239502200	Enhancers	Sigmoid Colon	Sigmoid Colon
43	chr1:239502200-239504600	Weak transcription	Sigmoid Colon	Sigmoid Colon
44	chr1:239504000-239504200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr1:239504200-239512000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr1:239506600-239507200	Enhancers	Colon Smooth Muscle	Colon
47	chr1:239506800-239507600	Enhancers	Fetal Muscle Trunk	muscle
48	chr1:239507200-239507600	Enhancers	Adipose Nuclei	Adipose
49	chr1:239512000-239512600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr1:239512200-239512600	Enhancers	Fetal Kidney	kidney

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