Variant report

Variant nsv873377
Chromosome Location chr1:242607583-243114662
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:1393 , 50 per page) page: 1 2 3 4 5 6 7 ... 28
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:242590400-242610200 Weak transcription HMEC breast
2 chr1:242594400-242610600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:242597200-242610600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:242597600-242610000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr1:242597600-242612400 Weak transcription Aorta Aorta
6 chr1:242597800-242619000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:242599600-242612600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:242604000-242611000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:242605800-242609800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:242606000-242609800 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr1:242606400-242609800 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:242606400-242610000 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr1:242606400-242610800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:242609800-242610000 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr1:242609800-242610000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:242609800-242610800 Enhancers iPS-20b Cell Line embryonic stem cell
17 chr1:242609800-242613200 Enhancers HUES6 Cell Line embryonic stem cell
18 chr1:242609800-242613200 Enhancers HUES64 Cell Line embryonic stem cell
19 chr1:242609800-242613400 Enhancers H1 Cell Line embryonic stem cell
20 chr1:242609800-242613600 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr1:242610000-242610400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:242610000-242610600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:242610000-242610800 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:242610000-242611000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr1:242610000-242611400 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr1:242610000-242613400 Enhancers HUES48 Cell Line embryonic stem cell
27 chr1:242610200-242611000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:242610200-242611000 Enhancers HMEC breast
29 chr1:242610200-242613400 Enhancers iPS-18 Cell Line embryonic stem cell
30 chr1:242610400-242610800 Enhancers Fetal Adrenal Gland Adrenal Gland
31 chr1:242610400-242611400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:242610600-242610800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:242610600-242611200 Enhancers NHEK skin
34 chr1:242610600-242611400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:242610600-242612000 Enhancers H9 Cell Line embryonic stem cell
36 chr1:242610600-242612200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:242610800-242611000 Enhancers ES-WA7 Cell Line embryonic stem cell
38 chr1:242610800-242611200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
39 chr1:242610800-242611400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:242610800-242611800 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:242610800-242612200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr1:242610800-242613000 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr1:242611000-242611200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr1:242611000-242611400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:242611000-242611600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
46 chr1:242611000-242612000 Active TSS Brain Germinal Matrix brain
47 chr1:242611000-242613000 Active TSS Brain Inferior Temporal Lobe brain
48 chr1:242611000-242613600 Enhancers Cortex derived primary cultured neurospheres brain
49 chr1:242611000-242632200 Weak transcription HMEC breast
50 chr1:242611200-242613200 Enhancers iPS-20b Cell Line embryonic stem cell

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