Variant report

Variant	nsv873423
Chromosome Location	chr1:246923861-246978504
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:539)
CpG islands
(count:2079)
Chromatin interactive
region (count:41)
LncRNA
region (count:32)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:539 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr1:246952177-246952496	H1-hESC	embryonic stem cell:	n/a	n/a
2	BCL3	chr1:246961509-246961834	GM12878	blood:	n/a	n/a
3	BCLAF1	chr1:246936225-246936868	GM12878	blood:	n/a	n/a
4	BHLHE40	chr1:246975943-246976244	HepG2	liver:	n/a	n/a
5	BHLHE40	chr1:246961064-246961178	K562	blood:	n/a	n/a
6	BHLHE40	chr1:246968492-246968773	HepG2	liver:	n/a	n/a
7	BHLHE40	chr1:246958086-246958377	K562	blood:	n/a	n/a
8	BRCA1	chr1:246948780-246948917	GM12878	blood:	n/a	n/a
9	CBX3	chr1:246960849-246961178	K562	blood:	n/a	n/a
10	CBX3	chr1:246945245-246946092	K562	blood:	n/a	n/a
11	CEBPB	chr1:246932550-246932995	IMR90	lung:	n/a	n/a
12	CEBPB	chr1:246968456-246968815	HepG2	liver:	n/a	n/a
13	CEBPB	chr1:246968498-246968701	HepG2	liver:	n/a	n/a
14	CEBPB	chr1:246945440-246945711	IMR90	lung:	n/a	n/a
15	CEBPB	chr1:246971523-246971796	HepG2	liver:	n/a	chr1:246971663-246971674
16	CEBPB	chr1:246958868-246958981	H1-hESC	embryonic stem cell:	n/a	n/a
17	CEBPB	chr1:246977415-246977759	HepG2	liver:	n/a	chr1:246977575-246977586
18	CEBPB	chr1:246945459-246945696	HepG2	liver:	n/a	n/a
19	CEBPB	chr1:246932562-246932991	Hela-S3	cervix:	n/a	n/a
20	CHD1	chr1:246936262-246936438	GM12878	blood:	n/a	n/a
21	CHD2	chr1:246951297-246951689	HepG2	liver:	n/a	chr1:246951311-246951321
22	CHD2	chr1:246948608-246948795	HepG2	liver:	n/a	n/a
23	CHD2	chr1:246932699-246932883	Hela-S3	cervix:	n/a	n/a
24	CHD2	chr1:246968439-246968445	H1-hESC	embryonic stem cell:	n/a	n/a
25	CHD2	chr1:246953803-246953918	HepG2	liver:	n/a	n/a
26	CHD2	chr1:246958101-246958430	Hela-S3	cervix:	n/a	n/a
27	CHD2	chr1:246952470-246952539	HepG2	liver:	n/a	n/a
28	CREB1	chr1:246936369-246936938	GM12878	blood:	n/a	n/a
29	CTCF	chr1:246945920-246946070	AG04450	lung:	n/a	n/a
30	CTCF	chr1:246972940-246973090	GM06990	blood:	n/a	n/a
31	CTCF	chr1:246972896-246973027	A549	lung:	n/a	n/a
32	CTCF	chr1:246972880-246973030	GM12878	blood:	n/a	n/a
33	CTCF	chr1:246972920-246973070	A549	lung:	n/a	n/a
34	CTCF	chr1:246972840-246973130	NHLF	lung:	n/a	n/a
35	CTCF	chr1:246972929-246973021	GM12878	blood:	n/a	n/a
36	CTCF	chr1:246972860-246973010	HVMF	connective:	n/a	n/a
37	CTCF	chr1:246972916-246973022	Gliobla	brain:	n/a	n/a
38	CTCF	chr1:246945960-246946110	HBMEC	blood vessel:	n/a	n/a
39	CTCF	chr1:246946060-246946210	HPAF	blood vessel:	n/a	n/a
40	CTCF	chr1:246972860-246973010	HCPEpiC	choroid plexus:	n/a	n/a
41	CTCF	chr1:246948880-246949030	GM12870	blood:	n/a	n/a
42	CTCF	chr1:246946080-246946230	AG04450	lung:	n/a	n/a
43	CTCF	chr1:246972900-246973050	HCT-116	colon:	n/a	n/a
44	CTCF	chr1:246948260-246948410	HUVEC	blood vessel:	n/a	chr1:246948379-246948392 chr1:246948379-246948388
45	CTCF	chr1:246972840-246972990	GM12871	blood:	n/a	n/a
46	CTCF	chr1:246972860-246973010	AG04449	skin:	n/a	n/a
47	CTCF	chr1:246972981-246973005	Medullo	brain:	n/a	n/a
48	CTCF	chr1:246939163-246939240	LNCaP	prostate:	n/a	n/a
49	CTCF	chr1:246945905-246945966	GM19239	blood:	n/a	n/a
50	CTCF	chr1:246972860-246973010	MCF-7	breast:	n/a	n/a

(count:2079 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:246958927-246958977	HMEC	breast:	n/a
2	chr1:246952215-246952265	NHDF-neo	bronchial:	n/a
3	chr1:246958927-246958977	NHBE	bronchial:	n/a
4	chr1:246955186-246955236	MCF-7	breast:	n/a
5	chr1:246931896-246931946	HCM	heart:	n/a
6	chr1:246958927-246958977	HMEC	breast:	n/a
7	chr1:246952215-246952265	NHDF-neo	bronchial:	n/a
8	chr1:246958927-246958977	NHBE	bronchial:	n/a
9	chr1:246955186-246955236	MCF-7	breast:	n/a
10	chr1:246931896-246931946	HCM	heart:	n/a
11	chr1:246958421-246958471	HRE	kidney:	n/a
12	chr1:246977054-246977104	IMR90	lung:	fetal
13	chr1:246959150-246959200	AG10803	skin:	n/a
14	chr1:246952508-246952558	HPAEpiC	pulmonary alveolar:	n/a
15	chr1:246952495-246952545	ovcar-3	ovarian:	n/a
16	chr1:246958957-246959007	IMR90	lung:	fetal
17	chr1:246977054-246977104	GM12892	blood:	n/a
18	chr1:246943745-246943795	MCF10A-Er-Src	breast:	n/a
19	chr1:246952048-246952098	A549	lung:	n/a
20	chr1:246953273-246953323	HNPCEpiC	eye:	n/a
21	chr1:246959150-246959200	Caco-2	colon:	n/a
22	chr1:246958862-246958912	AG04449	skin:	fetal
23	chr1:246943745-246943795	AG09319	gingival:	n/a
24	chr1:246952889-246952939	PrEC	prostate:	n/a
25	chr1:246943745-246943795	GM12891	blood:	n/a
26	chr1:246954130-246954180	PrEC	prostate:	n/a
27	chr1:246939249-246939299	AoSMC	blood vessel:	n/a
28	chr1:246958421-246958471	U87	brain:	n/a
29	chr1:246930936-246930986	GM12891	blood:	n/a
30	chr1:246954479-246954529	K562	blood:	n/a
31	chr1:246930955-246931005	PANC-1	pancreas:	n/a
32	chr1:246954397-246954447	PFSK-1	brain:	n/a
33	chr1:246939249-246939299	CMK	blood:	n/a
34	chr1:246939249-246939299	HMEC	breast:	n/a
35	chr1:246958862-246958912	AG04450	lung:	fetal
36	chr1:246952362-246952412	SK-N-SH_RA	brain:	n/a
37	chr1:246958927-246958977	HEK293	kidney:	embryo
38	chr1:246952048-246952098	MCF10A-Er-Src	breast:	n/a
39	chr1:246939407-246939457	SK-N-MC	brain:	n/a
40	chr1:246977054-246977104	HIPEpiC	eye:	n/a
41	chr1:246930936-246930986	MCF-7	breast:	n/a
42	chr1:246954130-246954180	NHDF-neo	bronchial:	n/a
43	chr1:246952508-246952558	BJ	skin:	n/a
44	chr1:246954397-246954447	BJ	skin:	n/a
45	chr1:246958862-246958912	HNPCEpiC	eye:	n/a
46	chr1:246952118-246952168	GM06990	blood:	n/a
47	chr1:246942431-246942481	HCT-116	colon:	n/a
48	chr1:246948597-246948647	Hela-S3	cervix:	n/a
49	chr1:246948597-246948647	NHBE	bronchial:	n/a
50	chr1:246939499-246939549	HRPEpiC	eye:	n/a

(count:41 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:246942351..246945041-chr1:246952061..246954954,2	K562	blood:
2	chr1:246940112..246942102-chr1:247093044..247095026,2	K562	blood:
3	chr1:246941558..246944485-chr20:45985608..45987605,2	MCF-7	breast:
4	chr1:246932646..246935152-chr1:246979853..246982699,2	K562	blood:
5	chr1:246944573..246947572-chr1:246947936..246950947,5	K562	blood:
6	chr1:246961516..246963761-chr1:246966339..246968259,2	K562	blood:
7	chr1:246966820..246969788-chr1:246972705..246974206,2	MCF-7	breast:
8	chr1:246922007..246925353-chr1:246926619..246930863,4	K562	blood:
9	chr1:246943277..246944793-chr1:246945937..246947774,2	K562	blood:
10	chr1:246922007..246925353-chr1:246926619..246930863,4	K562	blood:
11	chr1:246959485..246962350-chr1:246964445..246966193,2	K562	blood:
12	chr1:246934177..246937192-chr1:246941017..246944440,4	K562	blood:
13	chr1:246959485..246962350-chr1:246964445..246966193,2	K562	blood:
14	chr1:246946643..246948588-chr1:247104112..247106785,2	K562	blood:
15	chr1:246935414..246937125-chr1:246938877..246940791,2	K562	blood:
16	chr1:246929352..246931655-chr1:246940972..246943621,2	K562	blood:
17	chr1:246933982..246937125-chr1:246938877..246940973,4	K562	blood:
18	chr1:246940232..246941968-chr1:246942195..246944093,2	K562	blood:
19	chr1:246951287..246953566-chr1:246953954..246955878,2	K562	blood:
20	chr1:246929333..246931322-chr1:246952226..246954934,2	MCF-7	breast:
21	chr1:246860479..246862658-chr1:246926455..246929333,2	MCF-7	breast:
22	chr1:246933982..246937125-chr1:246938877..246940973,4	K562	blood:
23	chr1:246947863..246950737-chr1:246955534..246958026,3	K562	blood:
24	chr1:246960568..246961069-chr15:101792577..101793077,2	Hela-S3	cervix:
25	chr1:246939030..246940776-chr1:246947263..246949787,2	MCF-7	breast:
26	chr1:246966820..246969788-chr1:246972705..246974206,2	MCF-7	breast:
27	chr1:246935414..246937125-chr1:246938877..246940791,2	K562	blood:
28	chr1:246940173..246942753-chr1:246943130..246945283,2	MCF-7	breast:
29	chr1:246959981..246962716-chr1:246996728..246998857,2	K562	blood:
30	chr1:246945490..246947572-chr1:246949447..246951570,2	K562	blood:
31	chr1:246961516..246963761-chr1:246966339..246968259,2	K562	blood:
32	chr1:246937235..246940255-chr1:246941352..246944349,3	K562	blood:
33	chr1:246941244..246944008-chr1:246946969..246949951,3	MCF-7	breast:
34	chr1:246947185..246952305-chr1:246952338..246955724,5	K562	blood:
35	chr1:246929352..246931655-chr1:246940972..246943621,2	K562	blood:
36	chr1:246940232..246941968-chr1:246942195..246944093,2	K562	blood:
37	chr1:246951802..246955219-chr1:246959555..246964384,5	K562	blood:
38	chr1:246947863..246950737-chr1:246955534..246958026,3	K562	blood:
39	chr1:246941244..246944008-chr1:246946969..246949951,3	MCF-7	breast:
40	chr1:246951802..246955947-chr1:246959836..246963718,4	K562	blood:
41	chr1:246940173..246942753-chr1:246943130..246945283,2	MCF-7	breast:

(count:32 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SCCPDH-1	chr1:246955359-246955687	XLOC_000643
2	lnc-SCCPDH-1	chr1:246953748-246954788	XLOC_000643
3	lnc-SCCPDH-1	chr1:246946701-246947345	NONHSAT010736
4	lnc-CNST-3	chr1:246928783-246929034	NONHSAT010721
5	lnc-SCCPDH-1	chr1:246952810-246953000	NONHSAT010737
6	lnc-SCCPDH-1	chr1:246935603-246939074	ENSG00000260855.1
7	lnc-SCCPDH-1	chr1:246952694-246953000	NONHSAT010736
8	lnc-SCCPDH-1	chr1:246952810-246953000	NONHSAT010738
9	lnc-SCCPDH-1	chr1:246955359-246955689	XLOC_000643
10	lnc-SCCPDH-1	chr1:246954044-246954488	NONHSAT010738
11	lnc-SCCPDH-1	chr1:246947183-246947345	NONHSAT010737
12	lnc-SCCPDH-1	chr1:246953748-246954148	XLOC_000643
13	lnc-SCCPDH-1	chr1:246952919-246953000	XLOC_000643
14	lnc-SCCPDH-1	chr1:246947201-246947345	NONHSAT010738
15	lnc-SCCPDH-1	chr1:246952810-246953000	XLOC_000643
16	lnc-SCCPDH-1	chr1:246935607-246937461	NONHSAT010724
17	lnc-SCCPDH-1	chr1:246954044-246954148	XLOC_000643
18	lnc-SCCPDH-1	chr1:246953926-246954148	XLOC_000643
19	lnc-SCCPDH-1	chr1:246952785-246953000	NONHSAT139944
20	lnc-SCCPDH-1	chr1:246953748-246954148	NONHSAT010736
21	lnc-SCCPDH-1	chr1:246955359-246955691	NONHSAT010736
22	lnc-SCCPDH-1	chr1:246955359-246955790	XLOC_000643
23	lnc-SCCPDH-1	chr1:246952396-246953000	ENSG00000227953.2
24	lnc-SCCPDH-1	chr1:246953748-246954148	NONHSAT139944
25	lnc-SCCPDH-1	chr1:246952827-246953000	XLOC_000643
26	lnc-SCCPDH-1	chr1:246953748-246954148	NONHSAT010737
27	lnc-SCCPDH-1	chr1:246955359-246955607	NONHSAT139944
28	lnc-SCCPDH-1	chr1:246937472-246939075	NONHSAT010724
29	lnc-SCCPDH-1	chr1:246955359-246955843	NONHSAT010737
30	lnc-CNST-3	chr1:246926951-246927131	NONHSAT010721
31	lnc-SCCPDH-1	chr1:246947036-246947345	XLOC_000643
32	lnc-SCCPDH-1	chr1:246953748-246955687	ENSG00000227953.2

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	SCCPDH	hsa-miR-15b-5p	chr1:246931173-246931194

Variant related genes	Relation type
KIF28P	TF binding region
ENSG00000260855	TF binding region
ENSG00000235386	TF binding region
ENSG00000227953	TF binding region
ENSG00000252495	TF binding region
ENSG00000228879	TF binding region
KIF28P	CpG island
ENSG00000260855	CpG island
ENSG00000235386	CpG island
ENSG00000227953	CpG island
ENSG00000252495	CpG island
ENSG00000228879	CpG island
ENSG00000252011	chromatin interactions
ENSG00000260855	chromatin interactions
ENSG00000223519	chromatin interactions
ENSG00000227953	chromatin interactions
ENSG00000235386	chromatin interactions
ENSG00000153207	chromatin interactions
DDX3Y	miRNA target sites
DDX42	miRNA target sites
E2F3	miRNA target sites
C9orf5	miRNA target sites

Extended variants
information (count: 2490 )
Associated
traits (count: 85 )

Variant overlapped rSNPs/rCNVs (count:2490 , 50 per page) page: 1 2 3 4 5 6 7 ... 50

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6697063	chr1:246923861-246923862	Weak transcription Genic enhancers Strong transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs570234151	chr1:246923873-246923874	Weak transcription Genic enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs186422906	chr1:246923889-246923890	Weak transcription Genic enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs370395218	chr1:246923965-246923966	Weak transcription Genic enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs372301527	chr1:246923979-246923980	Weak transcription Genic enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs115102714	chr1:246924005-246924006	Weak transcription Genic enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs545527277	chr1:246924020-246924021	Weak transcription Genic enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs376409094	chr1:246924130-246924131	Weak transcription Genic enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs142667448	chr1:246924174-246924175	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs575676994	chr1:246924286-246924287	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs544492035	chr1:246924304-246924305	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs6426332	chr1:246924317-246924318	Weak transcription Genic enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs375493060	chr1:246924371-246924372	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs567056627	chr1:246924414-246924415	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs75135397	chr1:246924479-246924480	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs556038047	chr1:246924489-246924490	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs532636793	chr1:246924518-246924519	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552733651	chr1:246924552-246924553	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs368633505	chr1:246924638-246924639	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs12123234	chr1:246924656-246924657	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs4926447	chr1:246924668-246924669	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs548605327	chr1:246924790-246924791	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs7549965	chr1:246924796-246924797	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs367652552	chr1:246924864-246924865	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs578174756	chr1:246924865-246924866	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs555709386	chr1:246924875-246924876	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs553669102	chr1:246924887-246924888	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs148969063	chr1:246924895-246924896	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs57851997	chr1:246924948-246924949	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs143510121	chr1:246924964-246924965	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs555879094	chr1:246924985-246924986	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs575740871	chr1:246924986-246924987	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs191311456	chr1:246924988-246924989	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs561747091	chr1:246925028-246925029	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs567841236	chr1:246925085-246925086	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs543908093	chr1:246925086-246925087	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs372501256	chr1:246925092-246925093	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs528807135	chr1:246925106-246925107	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs556041421	chr1:246925130-246925131	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs540958055	chr1:246925149-246925150	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs137919153	chr1:246925150-246925151	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs57384976	chr1:246925154-246925155	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs142442770	chr1:246925162-246925163	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs562930867	chr1:246925229-246925230	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs74152240	chr1:246925230-246925231	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs553589452	chr1:246925233-246925234	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs561683753	chr1:246925243-246925244	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs138527904	chr1:246925272-246925273	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs141355058	chr1:246925283-246925284	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs572201085	chr1:246925294-246925295	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:85)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Neuroblastoma	21899760	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	20729466	CNVD
Testicular germ cell tumor	18059402	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Basal cell lymphoma	17053054	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16616336	CNVD
Ovarian cancer	21720365	CNVD
Glioblastoma multiforme	22291905	CNVD
Myelofibrosis	22110671	CNVD
Disease	21936942	CNVD
laryngomalacia	21936942	CNVD
GLUT3 deficiency syndrome	20509907	CNVD
Developmental delay	21373258	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Developmental delay	19490664	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Cutaneous malignant melanoma	18794153	CNVD
Astrocytoma	17934521	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Breast cancer	20409316	CNVD
Fibroblasts	17951408	CNVD
Lung cancer	17951408	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1564 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:246888400-246946400	Weak transcription	Small Intestine	intestine
2	chr1:246888600-246945600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr1:246889000-246929000	Weak transcription	Stomach Mucosa	stomach
4	chr1:246892600-246924400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr1:246895000-246942200	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr1:246895400-246938600	Weak transcription	Fetal Heart	heart
7	chr1:246901200-246924000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr1:246902800-246952800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr1:246904600-246942800	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr1:246905000-246924000	Weak transcription	Placenta Amnion	Placenta Amnion
11	chr1:246905000-246945800	Weak transcription	Psoas Muscle	Psoas
12	chr1:246905800-246931600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr1:246911800-246925000	Weak transcription	Fetal Lung	lung
14	chr1:246912600-246930800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr1:246912600-246932200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr1:246912800-246933200	Weak transcription	K562	blood
17	chr1:246917600-246931000	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr1:246917600-246931200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr1:246917600-246936000	Weak transcription	Primary B cells from peripheral blood	blood
20	chr1:246917800-246930800	Weak transcription	H1 Cell Line	embryonic stem cell
21	chr1:246918000-246930200	Weak transcription	Right Ventricle	heart
22	chr1:246920800-246931200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
23	chr1:246920800-246944200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr1:246921000-246931800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr1:246921200-246943200	Strong transcription	Dnd41	blood
26	chr1:246921600-246945800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr1:246922000-246927400	Strong transcription	Liver	Liver
28	chr1:246922000-246929800	Strong transcription	Fetal Thymus	thymus
29	chr1:246922000-246932000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr1:246922000-246936400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr1:246922200-246925400	Strong transcription	Brain Substantia Nigra	brain
32	chr1:246922200-246926400	Strong transcription	Brain Germinal Matrix	brain
33	chr1:246922200-246927600	Strong transcription	Duodenum Mucosa	Duodenum
34	chr1:246922200-246927600	Strong transcription	Fetal Stomach	stomach
35	chr1:246922200-246928400	Strong transcription	HSMMtube	muscle
36	chr1:246922200-246930400	Strong transcription	Duodenum Smooth Muscle	Duodenum
37	chr1:246922200-246931200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr1:246922200-246931200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr1:246922200-246932200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr1:246922200-246932800	Strong transcription	HepG2	liver
41	chr1:246922200-246933000	Strong transcription	Fetal Intestine Large	intestine
42	chr1:246922200-246934400	Strong transcription	Placenta	Placenta
43	chr1:246922200-246936000	Strong transcription	Primary neutrophils fromperipheralblood	blood
44	chr1:246922200-246936000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr1:246922200-246936200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr1:246922200-246937000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
47	chr1:246922200-246944600	Strong transcription	Fetal Muscle Trunk	muscle
48	chr1:246922400-246925400	Strong transcription	NHDF-Ad	bronchial
49	chr1:246922400-246925600	Strong transcription	Fetal Kidney	kidney
50	chr1:246922400-246926600	Strong transcription	Stomach Smooth Muscle	stomach

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