Variant report

Variant nsv873770
Chromosome Location chr2:30952987-30984850
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:184 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30902400-30954000 Weak transcription Gastric stomach
2 chr2:30940600-30969600 Weak transcription Stomach Mucosa stomach
3 chr2:30945800-30955400 Weak transcription Fetal Intestine Small intestine
4 chr2:30946800-30953200 Weak transcription Fetal Stomach stomach
5 chr2:30947400-30953000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr2:30950000-30954200 Weak transcription Duodenum Mucosa Duodenum
7 chr2:30951400-30954000 Strong transcription Rectal Mucosa Donor 31 rectum
8 chr2:30953000-30953600 Strong transcription Rectal Mucosa Donor 29 rectum
9 chr2:30953200-30954000 Strong transcription Fetal Stomach stomach
10 chr2:30953600-30965200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr2:30954000-30955800 Strong transcription Gastric stomach
12 chr2:30954000-30965400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:30955200-30955400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
14 chr2:30955400-30957200 Enhancers Fetal Intestine Small intestine
15 chr2:30955400-30959400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr2:30955800-30956000 ZNF genes & repeats Gastric stomach
17 chr2:30956000-30964000 Weak transcription Gastric stomach
18 chr2:30956400-30957000 Enhancers Fetal Intestine Large intestine
19 chr2:30957000-30969800 Weak transcription Fetal Intestine Large intestine
20 chr2:30957200-30964400 Weak transcription Fetal Intestine Small intestine
21 chr2:30959000-30960000 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr2:30959200-30959800 Enhancers HMEC breast
23 chr2:30959400-30959800 Enhancers NHEK skin
24 chr2:30959400-30960000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr2:30959400-30960200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr2:30959400-30960400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:30959400-30960600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
28 chr2:30959400-30962000 Weak transcription Right Atrium heart
29 chr2:30959600-30959800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr2:30960000-30963800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr2:30960200-30960400 Enhancers Brain Hippocampus Middle brain
32 chr2:30960400-30980000 Weak transcription Brain Hippocampus Middle brain
33 chr2:30961000-30965400 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr2:30961400-30961600 Enhancers Pancreas Pancrea
35 chr2:30961400-30964800 Weak transcription Fetal Stomach stomach
36 chr2:30961600-30978400 Weak transcription Pancreas Pancrea
37 chr2:30962000-30970200 Weak transcription Brain Substantia Nigra brain
38 chr2:30962600-30967600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr2:30963600-30969600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:30963800-30964800 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr2:30964000-30964400 Enhancers Adipose Nuclei Adipose
42 chr2:30964000-30970600 Strong transcription Gastric stomach
43 chr2:30964400-30965400 Weak transcription Duodenum Mucosa Duodenum
44 chr2:30964400-30969000 Strong transcription Fetal Intestine Small intestine
45 chr2:30964400-30978600 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr2:30964800-30965200 Strong transcription Fetal Stomach stomach
47 chr2:30965200-30965600 ZNF genes & repeats Fetal Stomach stomach
48 chr2:30965200-30966000 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr2:30965400-30965800 Strong transcription Pancreatic Islets Pancreatic Islet
50 chr2:30965400-30966000 Strong transcription Duodenum Mucosa Duodenum

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