Variant report

Variant	nsv874114
Chromosome Location	chr2:52521126-52628235
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr2:52562997-52563330	H1-hESC	embryonic stem cell:	n/a	chr2:52563100-52563114
2	BACH1	chr2:52565069-52565261	H1-hESC	embryonic stem cell:	n/a	n/a
3	CBX3	chr2:52554738-52555164	HCT-116	colon:	n/a	n/a
4	CEBPB	chr2:52568887-52569285	HepG2	liver:	n/a	n/a
5	CEBPB	chr2:52570199-52570514	A549	lung:	n/a	chr2:52570356-52570367 chr2:52570358-52570367 chr2:52570356-52570369 chr2:52570358-52570367 chr2:52570358-52570367
6	CEBPB	chr2:52562704-52563282	ECC-1	luminal epithelium:	n/a	chr2:52562955-52562968 chr2:52563083-52563094 chr2:52563266-52563277 chr2:52562956-52562967
7	CEBPB	chr2:52570882-52571236	H1-hESC	embryonic stem cell:	n/a	n/a
8	CEBPB	chr2:52570208-52570547	Hela-S3	cervix:	n/a	chr2:52570356-52570367 chr2:52570358-52570367 chr2:52570356-52570369 chr2:52570358-52570367 chr2:52570358-52570367
9	CEBPB	chr2:52562730-52563288	ECC-1	luminal epithelium:	n/a	chr2:52562955-52562968 chr2:52563083-52563094 chr2:52563266-52563277 chr2:52562956-52562967
10	CEBPB	chr2:52623783-52624296	HepG2	liver:	n/a	chr2:52624106-52624117
11	CEBPB	chr2:52570175-52570518	H1-hESC	embryonic stem cell:	n/a	chr2:52570356-52570367 chr2:52570358-52570367 chr2:52570356-52570369 chr2:52570358-52570367 chr2:52570358-52570367
12	CEBPB	chr2:52562815-52563192	IMR90	lung:	n/a	chr2:52562955-52562968 chr2:52563083-52563094 chr2:52562956-52562967
13	CEBPB	chr2:52616319-52616570	HepG2	liver:	n/a	chr2:52616446-52616457 chr2:52616447-52616458 chr2:52616446-52616459
14	CEBPB	chr2:52562773-52563118	HepG2	liver:	n/a	chr2:52562955-52562968 chr2:52563083-52563094 chr2:52562956-52562967
15	CEBPB	chr2:52569536-52570532	IMR90	lung:	n/a	chr2:52570356-52570367 chr2:52570358-52570367 chr2:52570356-52570369 chr2:52570358-52570367 chr2:52570358-52570367
16	CEBPB	chr2:52568912-52569271	HepG2	liver:	n/a	n/a
17	CEBPB	chr2:52570177-52570534	HepG2	liver:	n/a	chr2:52570356-52570367 chr2:52570358-52570367 chr2:52570356-52570369 chr2:52570358-52570367 chr2:52570358-52570367
18	CEBPB	chr2:52569009-52569163	HepG2	liver:	n/a	n/a
19	CEBPB	chr2:52562807-52563121	A549	lung:	n/a	chr2:52562955-52562968 chr2:52563083-52563094 chr2:52562956-52562967
20	CEBPB	chr2:52562875-52563266	H1-hESC	embryonic stem cell:	n/a	chr2:52562955-52562968 chr2:52563083-52563094 chr2:52562956-52562967
21	CTCF	chr2:52567497-52567583	H1-hESC	embryonic stem cell:	n/a	n/a
22	CTCF	chr2:52567460-52567610	HAc	cerebellar:	n/a	n/a
23	CTCF	chr2:52567430-52567681	IMR90	lung:	n/a	n/a
24	CTCF	chr2:52567440-52567590	HCPEpiC	choroid plexus:	n/a	n/a
25	CTCF	chr2:52613860-52614010	GM12875	blood:	n/a	n/a
26	CTCF	chr2:52524865-52524936	Lung_OC	lung:	n/a	n/a
27	CTCF	chr2:52567400-52567550	BE2_C	brain:	n/a	n/a
28	CTCF	chr2:52585340-52585400	GM20000	blood:	n/a	n/a
29	CTCF	chr2:52535760-52535910	GM12865	blood:	n/a	n/a
30	CTCF	chr2:52549827-52549833	GM20000	blood:	n/a	n/a
31	CTCF	chr2:52567460-52567610	WERI-Rb-1	eye:	n/a	n/a
32	CTCF	chr2:52567440-52567590	AG04450	lung:	n/a	n/a
33	CTCF	chr2:52567480-52567630	AG04449	skin:	n/a	n/a
34	CTCF	chr2:52566062-52566160	GM13976	blood:	n/a	n/a
35	CTCF	chr2:52567480-52567630	HCPEpiC	choroid plexus:	n/a	n/a
36	CTCF	chr2:52567240-52567390	HAc	cerebellar:	n/a	n/a
37	CTCF	chr2:52594040-52594190	GM12869	blood:	n/a	n/a
38	E2F4	chr2:52567940-52568322	MCF10A-Er-Src	breast:	n/a	n/a
39	E2F4	chr2:52580808-52581008	MCF10A-Er-Src	breast:	n/a	n/a
40	E2F4	chr2:52562812-52562995	MCF10A-Er-Src	breast:	n/a	n/a
41	EBF1	chr2:52621468-52621493	GM12878	blood:	n/a	n/a
42	EP300	chr2:52562566-52563428	ECC-1	luminal epithelium:	n/a	chr2:52562953-52562967 chr2:52562811-52562825 chr2:52563102-52563111
43	EP300	chr2:52596370-52596765	T-47D	breast:	n/a	n/a
44	EP300	chr2:52613433-52613450	GM12878	blood:	n/a	n/a
45	FOS	chr2:52564135-52564316	MCF10A-Er-Src	breast:	n/a	n/a
46	FOS	chr2:52567985-52568351	MCF10A-Er-Src	breast:	n/a	chr2:52568163-52568171 chr2:52568162-52568172 chr2:52568162-52568172 chr2:52568161-52568173
47	FOS	chr2:52564169-52564368	MCF10A-Er-Src	breast:	n/a	n/a
48	FOS	chr2:52546119-52546263	MCF10A-Er-Src	breast:	n/a	chr2:52546159-52546169 chr2:52546159-52546169 chr2:52546159-52546169 chr2:52546159-52546169 chr2:52546160-52546169
49	FOS	chr2:52564168-52564351	MCF10A-Er-Src	breast:	n/a	n/a
50	FOS	chr2:52562948-52563267	MCF10A-Er-Src	breast:	n/a	chr2:52563103-52563112 chr2:52563102-52563111

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:52614831-52614881	MCF10A-Er-Src	breast:	n/a
2	chr2:52571550-52571600	HMEC	breast:	n/a
3	chr2:52571550-52571600	HUVEC	blood vessel:	n/a
4	chr2:52614831-52614881	MCF10A-Er-Src	breast:	n/a
5	chr2:52571550-52571600	HMEC	breast:	n/a
6	chr2:52571550-52571600	HUVEC	blood vessel:	n/a
7	chr2:52614831-52614881	HNPCEpiC	eye:	n/a
8	chr2:52571550-52571600	HCM	heart:	n/a
9	chr2:52571550-52571600	HL-60	blood:	n/a
10	chr2:52614831-52614881	SKMC	muscle:	n/a
11	chr2:52614831-52614881	K562	blood:	n/a
12	chr2:52614831-52614881	GM19239	blood:	n/a
13	chr2:52571550-52571600	NH-A	brain:	n/a
14	chr2:52614831-52614881	SK-N-SH	brain:	n/a
15	chr2:52571550-52571600	T-47D	breast:	n/a
16	chr2:52571550-52571600	GM19239	blood:	n/a
17	chr2:52571550-52571600	HRCEpiC	kidney:	n/a
18	chr2:52614831-52614881	Jurkat	blood:	n/a
19	chr2:52614831-52614881	H1-hESC	embryonic stem cell:	embryo
20	chr2:52571550-52571600	BJ	skin:	n/a
21	chr2:52571550-52571600	SKMC	muscle:	n/a
22	chr2:52571550-52571600	AG10803	skin:	n/a
23	chr2:52571550-52571600	SK-N-SH	brain:	n/a
24	chr2:52571550-52571600	HRPEpiC	eye:	n/a
25	chr2:52614831-52614881	LNCaP	prostate:	n/a
26	chr2:52614831-52614881	ovcar-3	ovarian:	n/a
27	chr2:52614831-52614881	HMEC	breast:	n/a
28	chr2:52571550-52571600	ProgFib	skin:	n/a
29	chr2:52571550-52571600	ovcar-3	ovarian:	n/a
30	chr2:52571550-52571600	NHBE	bronchial:	n/a
31	chr2:52614831-52614881	IMR90	lung:	fetal
32	chr2:52614831-52614881	HCM	heart:	n/a
33	chr2:52571550-52571600	HepG2	liver:	n/a
34	chr2:52614831-52614881	GM12878	blood:	n/a
35	chr2:52614831-52614881	PrEC	prostate:	n/a
36	chr2:52614831-52614881	AG09309	skin:	n/a
37	chr2:52571550-52571600	PrEC	prostate:	n/a
38	chr2:52571550-52571600	GM12892	blood:	n/a
39	chr2:52571550-52571600	U87	brain:	n/a
40	chr2:52571550-52571600	IMR90	lung:	fetal
41	chr2:52614831-52614881	HPAEpiC	pulmonary alveolar:	n/a
42	chr2:52571550-52571600	PFSK-1	brain:	n/a
43	chr2:52614831-52614881	MCF-7	breast:	n/a
44	chr2:52614831-52614881	Hela-S3	cervix:	n/a
45	chr2:52614831-52614881	HEK293	kidney:	embryo
46	chr2:52614831-52614881	U87	brain:	n/a
47	chr2:52614831-52614881	PFSK-1	brain:	n/a
48	chr2:52571550-52571600	CMK	blood:	n/a
49	chr2:52614831-52614881	BJ	skin:	n/a
50	chr2:52614831-52614881	HCPEpiC	choroid plexus:	n/a

No.	Distal block	Cell Line	Cell type
1	chr2:52521422..52524399-chr2:52528510..52532522,3	K562	blood:
2	chr2:52618576..52620644-chr2:52620820..52623618,2	MCF-7	breast:
3	chr2:52618576..52620644-chr2:52620820..52623618,2	MCF-7	breast:
4	chr2:52521422..52524399-chr2:52528510..52532522,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHAC2-3	chr2:52616601-52617150	XLOC_001468
2	lnc-CHAC2-3	chr2:52600256-52600309	XLOC_001468
3	lnc-CHAC2-4	chr2:52580012-52580100	ENSG00000231918.1
4	lnc-CHAC2-4	chr2:52543370-52543438	ENSG00000231918.1
5	lnc-ASB3-11	chr2:52576407-52576478	NONHSAT070669
6	lnc-ASB3-11	chr2:52575330-52575504	NONHSAT070669
7	lnc-ASB3-11	chr2:52579245-52579427	NONHSAT070669
8	lnc-ASB3-11	chr2:52581186-52581394	NONHSAT070669
9	lnc-CHAC2-4	chr2:52576463-52578424	ENSG00000231918.1

Variant related genes	Relation type
ENSG00000225444	TF binding region
ENSG00000202195	TF binding region
ENSG00000225444	CpG island
ENSG00000202195	CpG island

Extended variants
information (count: 3409 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:3409 , 50 per page) page: 1 2 3 4 5 6 7 ... 69

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1922210	chr2:52521126-52521127	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs547255473	chr2:52521134-52521135	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs546933279	chr2:52521165-52521166	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs140329746	chr2:52521172-52521173	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs549751182	chr2:52521191-52521192	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs73933264	chr2:52521214-52521215	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs374194447	chr2:52521220-52521221	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs188580295	chr2:52521271-52521272	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs567704860	chr2:52521272-52521273	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs558827710	chr2:52521289-52521290	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs566251577	chr2:52521314-52521315	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs372231646	chr2:52521315-52521316	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs535262814	chr2:52521358-52521359	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs114304336	chr2:52521387-52521388	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs58551135	chr2:52521394-52521395	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs552948774	chr2:52521403-52521404	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs145608208	chr2:52521417-52521418	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs113255883	chr2:52521418-52521419	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs201368802	chr2:52521443-52521444	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs556079114	chr2:52521447-52521448	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs528887833	chr2:52521452-52521453	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs576001313	chr2:52521481-52521482	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs371653524	chr2:52521488-52521489	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs545077998	chr2:52521542-52521543	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs192930837	chr2:52521562-52521563	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs149525915	chr2:52521621-52521622	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs540797581	chr2:52521636-52521637	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs183152118	chr2:52521651-52521652	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs529895268	chr2:52521657-52521658	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs549665239	chr2:52521684-52521685	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs111755147	chr2:52521701-52521702	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs12614311	chr2:52521716-52521717	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs370833331	chr2:52521718-52521719	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs552621747	chr2:52521762-52521763	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs187019391	chr2:52521770-52521771	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs541525280	chr2:52521784-52521785	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs566013826	chr2:52521794-52521795	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs570513115	chr2:52521810-52521811	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs75462760	chr2:52521815-52521816	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs546902925	chr2:52521858-52521859	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs555161188	chr2:52521882-52521883	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs568674811	chr2:52521892-52521893	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs561444130	chr2:52521908-52521909	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs72887261	chr2:52522004-52522005	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs191113283	chr2:52522039-52522040	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs150847467	chr2:52522096-52522097	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs10178126	chr2:52522102-52522103	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs75384283	chr2:52522123-52522124	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs145811887	chr2:52522155-52522156	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs540734201	chr2:52522165-52522166	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Breast cancer	17603634	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	22495311	CNVD
Autism	18522746	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Williams Syndrome	20824207	CNVD
Breast cancer	16272173	CNVD
Lung cancer	17297452	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Schizophrenia	20433910	CNVD
Autism	21701786	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Austim spectrum disorder	21302340	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	20553308	CNVD
Autism	22241247	CNVD
Myelofibrosis	22110671	CNVD
Lung adenocarcinoma	17086460	CNVD
Retinoblastoma	22278416	CNVD
Cancer	21183584	CNVD
Breast cancer	16397240	CNVD
Acute lymphoblastic leukemia	18768390	CNVD
Mental retardation	19521722	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	18940311	CNVD
Schizophrenia	19348701	CNVD
Schizophrenia	18945720	CNVD
Schizophrenia	19571808	CNVD
Prostate cancer	16573809	CNVD
Neuroticism	17667963	CNVD
Schizophrenia	19443537	CNVD
Schizophrenia	19546859	CNVD
Autism	17322880	CNVD
Lung cancer	17086460	CNVD
Chronic lymphocytic leukemia	17053054	CNVD
Hereditary non-polyposis colorectal cancer	19566914	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:264 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:52515200-52523000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr2:52519200-52521600	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr2:52520000-52521200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr2:52520200-52521400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr2:52520600-52521600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr2:52520800-52521200	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr2:52520800-52522400	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr2:52521000-52522400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr2:52521200-52523800	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr2:52521400-52522000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr2:52521400-52522200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr2:52521600-52522200	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr2:52521600-52524800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr2:52522200-52522800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr2:52522400-52523000	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr2:52522800-52523000	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr2:52522800-52523200	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr2:52523000-52523800	Enhancers	iPS-15b Cell Line	embryonic stem cell
19	chr2:52524800-52526000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
20	chr2:52535800-52536400	Enhancers	Fetal Intestine Large	intestine
21	chr2:52537200-52537800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr2:52537600-52538800	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr2:52537600-52539600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
24	chr2:52537800-52538800	Enhancers	HUES6 Cell Line	embryonic stem cell
25	chr2:52537800-52540000	Enhancers	ES-I3 Cell Line	embryonic stem cell
26	chr2:52538000-52539000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr2:52538200-52539600	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr2:52538400-52538600	Enhancers	iPS-20b Cell Line	embryonic stem cell
29	chr2:52538400-52538800	Enhancers	HUES48 Cell Line	embryonic stem cell
30	chr2:52538400-52538800	Enhancers	iPS-18 Cell Line	embryonic stem cell
31	chr2:52538400-52539800	Enhancers	Brain Germinal Matrix	brain
32	chr2:52538600-52539400	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
33	chr2:52538800-52539200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr2:52538800-52539200	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
35	chr2:52538800-52539200	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
36	chr2:52538800-52539400	Enhancers	H1 Cell Line	embryonic stem cell
37	chr2:52538800-52539400	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
38	chr2:52538800-52539400	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
39	chr2:52538800-52540000	Enhancers	Cortex derived primary cultured neurospheres	brain
40	chr2:52538800-52540000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr2:52539000-52539800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr2:52539200-52539400	Enhancers	HUES48 Cell Line	embryonic stem cell
43	chr2:52539200-52539800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
44	chr2:52539200-52539800	Enhancers	HUES64 Cell Line	embryonic stem cell
45	chr2:52539400-52539800	Enhancers	HUES6 Cell Line	embryonic stem cell
46	chr2:52539400-52539800	Enhancers	iPS-20b Cell Line	embryonic stem cell
47	chr2:52539400-52540000	Enhancers	iPS-18 Cell Line	embryonic stem cell
48	chr2:52539800-52540000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr2:52552400-52552800	Enhancers	ES-I3 Cell Line	embryonic stem cell
50	chr2:52552600-52552800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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