Variant report

Variant nsv874137
Chromosome Location chr2:53114775-53216917
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:152 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:53105600-53121800 Weak transcription Pancreas Pancrea
2 chr2:53108200-53119800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr2:53109200-53115800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr2:53109400-53145600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr2:53115800-53117200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
6 chr2:53119800-53120200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
7 chr2:53120200-53121200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr2:53121200-53121600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
9 chr2:53121200-53122200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr2:53121800-53122000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:53121800-53122000 ZNF genes & repeats Pancreas Pancrea
12 chr2:53122000-53122200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr2:53122000-53122400 Weak transcription Pancreas Pancrea
14 chr2:53122200-53126200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr2:53123200-53125200 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr2:53124000-53126000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
17 chr2:53124600-53124800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
18 chr2:53124800-53126000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr2:53125800-53126400 Enhancers H1 Cell Line embryonic stem cell
20 chr2:53126000-53126200 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
21 chr2:53126000-53126400 ZNF genes & repeats Gastric stomach
22 chr2:53126200-53126400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
23 chr2:53131400-53131800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr2:53131400-53132000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr2:53131400-53132000 Enhancers Fetal Muscle Leg muscle
26 chr2:53131400-53132400 Enhancers Hela-S3 cervix
27 chr2:53144200-53144400 Enhancers Fetal Intestine Large intestine
28 chr2:53144200-53144400 Enhancers Hela-S3 cervix
29 chr2:53144400-53145400 Weak transcription Hela-S3 cervix
30 chr2:53145400-53146000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:53145400-53147000 Enhancers Hela-S3 cervix
32 chr2:53145400-53147200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr2:53145400-53147200 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr2:53145600-53146200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr2:53145600-53146400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:53145600-53147200 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr2:53146400-53147200 Enhancers Fetal Intestine Small intestine
38 chr2:53146400-53148000 Enhancers Pancreatic Islets Pancreatic Islet
39 chr2:53146400-53160000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr2:53146800-53147000 Enhancers Fetal Intestine Large intestine
41 chr2:53147000-53147600 Enhancers Stomach Mucosa stomach
42 chr2:53156600-53157400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
43 chr2:53157200-53157800 Weak transcription Aorta Aorta
44 chr2:53157400-53158600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr2:53158600-53159200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr2:53158600-53159200 Enhancers GM12878-XiMat blood
47 chr2:53158800-53159200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr2:53159200-53160000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr2:53159200-53160400 Weak transcription GM12878-XiMat blood
50 chr2:53159200-53162200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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