Variant report

Variant nsv874146
Chromosome Location chr2:53772561-53872803
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:351 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:53771400-53778000 Enhancers Fetal Brain Male brain
2 chr2:53771600-53774200 Enhancers Fetal Brain Female brain
3 chr2:53771600-53774600 Enhancers Cortex derived primary cultured neurospheres brain
4 chr2:53771800-53773600 Enhancers Brain Germinal Matrix brain
5 chr2:53771800-53774000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
6 chr2:53772000-53772600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr2:53772000-53773200 Enhancers HMEC breast
8 chr2:53772000-53773200 Enhancers NHEK skin
9 chr2:53772200-53773200 Enhancers Brain Inferior Temporal Lobe brain
10 chr2:53772200-53774200 Enhancers Brain Angular Gyrus brain
11 chr2:53772200-53774800 Enhancers Brain Hippocampus Middle brain
12 chr2:53772400-53772600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr2:53772400-53772800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr2:53772400-53773000 Enhancers Fetal Stomach stomach
15 chr2:53772400-53773200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr2:53772400-53773400 Weak transcription Brain Anterior Caudate brain
17 chr2:53772400-53774000 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr2:53772600-53772800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:53772600-53773600 Enhancers Brain Substantia Nigra brain
20 chr2:53773000-53773200 Enhancers Esophagus oesophagus
21 chr2:53773000-53773200 Enhancers Left Ventricle heart
22 chr2:53773000-53774400 Enhancers Pancreatic Islets Pancreatic Islet
23 chr2:53773200-53773400 Enhancers Brain Cingulate Gyrus brain
24 chr2:53773200-53776800 Weak transcription Brain Inferior Temporal Lobe brain
25 chr2:53773200-53776800 Weak transcription Left Ventricle heart
26 chr2:53773400-53773800 Enhancers Brain Anterior Caudate brain
27 chr2:53773800-53774800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:53774000-53774200 Enhancers Brain Cingulate Gyrus brain
29 chr2:53774000-53774600 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr2:53774200-53776600 Weak transcription Fetal Brain Female brain
31 chr2:53776200-53777600 Enhancers Fetal Heart heart
32 chr2:53776600-53777000 Enhancers Fetal Brain Female brain
33 chr2:53776800-53777000 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr2:53776800-53777000 Enhancers Left Ventricle heart
35 chr2:53776800-53777200 Enhancers Brain Inferior Temporal Lobe brain
36 chr2:53777000-53780800 Weak transcription Left Ventricle heart
37 chr2:53780200-53780400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr2:53780600-53781000 Enhancers Right Ventricle heart
39 chr2:53780600-53782400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
40 chr2:53780800-53781200 Enhancers Left Ventricle heart
41 chr2:53780800-53782400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
42 chr2:53781000-53781400 ZNF genes & repeats Right Ventricle heart
43 chr2:53781400-53782200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
44 chr2:53781400-53782400 Weak transcription Right Ventricle heart
45 chr2:53782400-53782600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr2:53782400-53782600 Enhancers Right Ventricle heart
47 chr2:53782600-53783000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr2:53784600-53784800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr2:53784800-53786400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr2:53786400-53787000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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