Variant report

Variant	nsv875551
Chromosome Location	chr2:186844579-186965143
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:411)
CpG islands
(count:61)
Chromatin interactive
region (count:17)
LncRNA
region (count:30)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:411 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr2:186853506-186853842	HepG2	liver:	n/a	n/a
2	ARID3A	chr2:186933182-186933390	HepG2	liver:	n/a	n/a
3	ARID3A	chr2:186855637-186856004	HepG2	liver:	n/a	n/a
4	BACH1	chr2:186917756-186918018	H1-hESC	embryonic stem cell:	n/a	chr2:186917846-186917860
5	BACH1	chr2:186855743-186855846	H1-hESC	embryonic stem cell:	n/a	n/a
6	BHLHE40	chr2:186929279-186929572	GM12878	blood:	n/a	n/a
7	BHLHE40	chr2:186896017-186896505	GM12878	blood:	n/a	n/a
8	CCNT2	chr2:186905250-186905377	K562	blood:	n/a	n/a
9	CEBPB	chr2:186881616-186881820	HepG2	liver:	n/a	chr2:186881764-186881775
10	CEBPB	chr2:186888229-186888431	HepG2	liver:	n/a	chr2:186888282-186888293 chr2:186888300-186888311
11	CEBPB	chr2:186923368-186923898	H1-hESC	embryonic stem cell:	n/a	n/a
12	CEBPB	chr2:186863446-186863745	Hela-S3	cervix:	n/a	chr2:186863590-186863601
13	CEBPB	chr2:186863425-186863774	A549	lung:	n/a	chr2:186863590-186863601
14	CEBPB	chr2:186881632-186881878	A549	lung:	n/a	chr2:186881764-186881775
15	CEBPB	chr2:186906365-186906557	HepG2	liver:	n/a	n/a
16	CEBPB	chr2:186918858-186919191	IMR90	lung:	n/a	chr2:186919035-186919044 chr2:186919033-186919044 chr2:186919034-186919045
17	CEBPB	chr2:186886764-186886992	HepG2	liver:	n/a	n/a
18	CEBPB	chr2:186861384-186861537	HepG2	liver:	n/a	chr2:186861485-186861496
19	CEBPB	chr2:186863427-186863776	IMR90	lung:	n/a	chr2:186863590-186863601
20	CEBPB	chr2:186954617-186954851	HepG2	liver:	n/a	chr2:186954740-186954751
21	CEBPB	chr2:186863413-186863783	HepG2	liver:	n/a	chr2:186863590-186863601
22	CEBPB	chr2:186918854-186919223	HepG2	liver:	n/a	chr2:186919035-186919044 chr2:186919033-186919044 chr2:186919034-186919045
23	CEBPB	chr2:186888225-186888463	A549	lung:	n/a	chr2:186888282-186888293 chr2:186888300-186888311
24	CEBPB	chr2:186886854-186887053	A549	lung:	n/a	n/a
25	CEBPB	chr2:186853669-186853919	HepG2	liver:	n/a	n/a
26	CHD2	chr2:186874059-186874362	H1-hESC	embryonic stem cell:	n/a	n/a
27	CHD2	chr2:186896175-186896280	GM12878	blood:	n/a	n/a
28	CTCF	chr2:186844636-186844720	HepG2	liver:	n/a	n/a
29	CTCF	chr2:186844660-186844810	HA-sp	spinal cord:	n/a	n/a
30	CTCF	chr2:186844620-186844770	BE2_C	brain:	n/a	n/a
31	CTCF	chr2:186844570-186844775	HepG2	liver:	n/a	n/a
32	CTCF	chr2:186954200-186954350	MCF-7	breast:	n/a	n/a
33	CTCF	chr2:186844600-186844750	SK-N-SH_RA	brain:	n/a	n/a
34	CTCF	chr2:186844513-186844863	GM12878	blood:	n/a	n/a
35	CTCF	chr2:186844600-186844750	BE2_C	brain:	n/a	n/a
36	CTCF	chr2:186844652-186844707	GM19239	blood:	n/a	n/a
37	CTCF	chr2:186844606-186844734	HUVEC	blood vessel:	n/a	n/a
38	CTCF	chr2:186844620-186844770	MCF-7	breast:	n/a	n/a
39	CTCF	chr2:186844661-186844711	GM12892	blood:	n/a	n/a
40	CTCF	chr2:186954240-186954390	HepG2	liver:	n/a	n/a
41	CTCF	chr2:186879091-186879144	GM20000	blood:	n/a	n/a
42	CTCF	chr2:186844670-186844693	LNCaP	prostate:	n/a	n/a
43	CTCF	chr2:186844635-186844715	Pancreas_OC	pancreas:	n/a	n/a
44	CTCF	chr2:186844620-186844770	HPF	lung:	n/a	n/a
45	CTCF	chr2:186844560-186844710	HEK293	kidney:	n/a	n/a
46	CTCF	chr2:186844585-186844748	MCF-7	breast:	n/a	n/a
47	CTCF	chr2:186844660-186844810	HMEC	breast:	n/a	n/a
48	CTCF	chr2:186844620-186844770	HEEpiC	esophagus:	n/a	n/a
49	CTCF	chr2:186954242-186954328	HepG2	liver:	n/a	n/a
50	CTCF	chr2:186844598-186844720	Gliobla	brain:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:186924071-186924121	BJ	skin:	n/a
2	chr2:186924071-186924121	LNCaP	prostate:	n/a
3	chr2:186924071-186924121	GM19239	blood:	n/a
4	chr2:186924071-186924121	HMEC	breast:	n/a
5	chr2:186924071-186924121	ECC-1	luminal epithelium:	n/a
6	chr2:186924071-186924121	IMR90	lung:	fetal
7	chr2:186924071-186924121	NT2-D1	testis:	n/a
8	chr2:186924071-186924121	MCF10A-Er-Src	breast:	n/a
9	chr2:186924071-186924121	Caco-2	colon:	n/a
10	chr2:186924071-186924121	MCF-7	breast:	n/a
11	chr2:186924071-186924121	HL-60	blood:	n/a
12	chr2:186924071-186924121	GM12878	blood:	n/a
13	chr2:186924071-186924121	NH-A	brain:	n/a
14	chr2:186924071-186924121	NHDF-neo	bronchial:	n/a
15	chr2:186924071-186924121	SAEC	small airway:	n/a
16	chr2:186924071-186924121	K562	blood:	n/a
17	chr2:186924071-186924121	HRPEpiC	eye:	n/a
18	chr2:186924071-186924121	RPTEC	kidney:	n/a
19	chr2:186924071-186924121	SK-N-MC	brain:	n/a
20	chr2:186924071-186924121	PrEC	prostate:	n/a
21	chr2:186924071-186924121	HPAEpiC	pulmonary alveolar:	n/a
22	chr2:186924071-186924121	AG04449	skin:	fetal
23	chr2:186924071-186924121	HEK293	kidney:	embryo
24	chr2:186924071-186924121	NB4	blood:	n/a
25	chr2:186924071-186924121	H1-hESC	embryonic stem cell:	embryo
26	chr2:186924071-186924121	HEEpiC	esophagus:	n/a
27	chr2:186924071-186924121	HUVEC	blood vessel:	n/a
28	chr2:186924071-186924121	HCPEpiC	choroid plexus:	n/a
29	chr2:186924071-186924121	AG10803	skin:	n/a
30	chr2:186924071-186924121	Hela-S3	cervix:	n/a
31	chr2:186924071-186924121	HCT-116	colon:	n/a
32	chr2:186924071-186924121	ProgFib	skin:	n/a
33	chr2:186924071-186924121	ovcar-3	ovarian:	n/a
34	chr2:186924071-186924121	HRCEpiC	kidney:	n/a
35	chr2:186924071-186924121	BE2_C	brain:	n/a
36	chr2:186924071-186924121	HCF	heart:	n/a
37	chr2:186924071-186924121	GM12892	blood:	n/a
38	chr2:186924071-186924121	HIPEpiC	eye:	n/a
39	chr2:186924071-186924121	SKMC	muscle:	n/a
40	chr2:186924071-186924121	Hepatocyte	liver:	n/a
41	chr2:186924071-186924121	GM12891	blood:	n/a
42	chr2:186924071-186924121	AG09319	gingival:	n/a
43	chr2:186924071-186924121	SK-N-SH	brain:	n/a
44	chr2:186924071-186924121	U87	brain:	n/a
45	chr2:186924071-186924121	NHBE	bronchial:	n/a
46	chr2:186924071-186924121	A549	lung:	n/a
47	chr2:186924071-186924121	SK-N-SH_RA	brain:	n/a
48	chr2:186924071-186924121	CMK	blood:	n/a
49	chr2:186924071-186924121	T-47D	breast:	n/a
50	chr2:186924071-186924121	HepG2	liver:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:186953883..186956490-chr2:186957329..186960004,2	K562	blood:
2	chr2:186948418..186950441-chr2:187047439..187049579,2	K562	blood:
3	chr17:57913762..57915412-chr2:186861621..186864023,2	MCF-7	breast:
4	chr2:186882755..186884529-chr2:186886544..186888768,2	K562	blood:
5	chr2:186905396..186906984-chr2:186927102..186929134,2	K562	blood:
6	chr2:186913950..186916894-chr2:186919637..186921761,2	K562	blood:
7	chr2:186913950..186916894-chr2:186919637..186921761,2	K562	blood:
8	chr2:186882755..186884529-chr2:186886544..186888768,2	K562	blood:
9	chr2:186861297..186864828-chr2:186866334..186869154,3	K562	blood:
10	chr2:186851763..186854059-chr2:186854208..186855953,2	MCF-7	breast:
11	chr2:186905396..186906984-chr2:186927102..186929134,2	K562	blood:
12	chr2:186898326..186901023-chr2:187349730..187351831,2	K562	blood:
13	chr2:186861297..186864828-chr2:186866334..186869154,3	K562	blood:
14	chr2:186851763..186854059-chr2:186854208..186855953,2	MCF-7	breast:
15	chr2:186844422..186846233-chr2:187042627..187045441,2	K562	blood:
16	chr2:186953883..186956490-chr2:186957329..186960004,2	K562	blood:
17	chr2:186943617..186946004-chr2:186946269..186949362,3	K562	blood:

(count:30 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZSWIM2-3	chr2:186947881-186947960	ENSG00000237877
2	lnc-ZSWIM2-3	chr2:186903058-186903159	ENSG00000237877
3	lnc-ZSWIM2-3	chr2:186898258-186898529	ENSG00000237877
4	lnc-FSIP2-4	chr2:186932840-186933840	NONHSAT075984
5	lnc-ZSWIM2-3	chr2:186946057-186946143	NONHSAT075981
6	lnc-ZSWIM2-3	chr2:186903058-186903162	NR_110218
7	lnc-ZSWIM2-3	chr2:186946057-186946143	NR_110218
8	lnc-ZSWIM2-3	chr2:186897618-186898529	ENSG00000237877.2
9	lnc-ZSWIM2-3	chr2:186904227-186904282	NONHSAT075981
10	lnc-ZSWIM2-3	chr2:186897623-186897908	NONHSAT075981
11	lnc-ZSWIM2-3	chr2:186903058-186903162	NONHSAT075981
12	lnc-ZSWIM2-3	chr2:186947881-186947951	NONHSAT075981
13	lnc-FSIP2-4	chr2:186946053-186946143	NONHSAT075984
14	lnc-FSIP2-4	chr2:186947780-186951158	NONHSAT075984
15	lnc-ZSWIM2-3	chr2:186947881-186947960	ENSG00000237877.2
16	lnc-ZSWIM2-3	chr2:186946057-186946143	ENSG00000237877.2
17	lnc-ZSWIM2-3	chr2:186946057-186946143	ENSG00000237877
18	lnc-ZSWIM2-3	chr2:186904227-186904282	ENSG00000237877
19	lnc-ZSWIM2-3	chr2:186947881-186947948	NR_110218
20	lnc-ZSWIM2-3	chr2:186898261-186898529	NR_110218
21	lnc-ZSWIM2-3	chr2:186947881-186947950	ENSG00000237877
22	lnc-ZSWIM2-3	chr2:186898222-186898531	NONHSAT075981
23	lnc-FSIP2-4	chr2:186923254-186923714	NONHSAT075984
24	lnc-ZSWIM2-3	chr2:186946057-186946143	ENSG00000237877
25	lnc-ZSWIM2-3	chr2:186951028-186951044	NR_110218
26	lnc-ZSWIM2-3	chr2:186897872-186898529	ENSG00000237877
27	lnc-ZSWIM2-3	chr2:186904227-186904282	NR_110218
28	lnc-FSIP2-3	chr2:186963163-186964146	NONHSAT075986
29	lnc-FSIP2-4	chr2:186964372-186965726	NONHSAT075984
30	lnc-FSIP2-2	chr2:186953806-186955337	NONHSAT075985

No data

Variant related genes	Relation type
ENSG00000237877	TF binding region
ENSG00000237877	CpG island
ENSG00000237877	chromatin interactions
ENSG00000065548	chromatin interactions
ENSG00000062716	chromatin interactions

Extended variants
information (count: 3262 )
Associated
traits (count: 50 )

Variant overlapped rSNPs/rCNVs (count:3262 , 50 per page) page: 1 2 3 4 5 6 7 ... 66

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10182124	chr2:186844579-186844580	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs561129455	chr2:186844611-186844612	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs184415583	chr2:186844648-186844649	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs574483837	chr2:186844667-186844668	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs564857899	chr2:186844686-186844687	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs140546874	chr2:186844711-186844712	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs546999118	chr2:186844726-186844727	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs74767844	chr2:186844754-186844755	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs375142887	chr2:186844764-186844765	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs10172266	chr2:186844805-186844806	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs570209447	chr2:186844822-186844823	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs34317363	chr2:186844838-186844839	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs114433875	chr2:186844847-186844848	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs72907860	chr2:186844899-186844900	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs571169967	chr2:186844913-186844914	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs534967071	chr2:186844991-186844992	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs532170731	chr2:186845048-186845049	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs9288118	chr2:186845068-186845069	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs151272217	chr2:186845070-186845071	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs562468042	chr2:186845071-186845072	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs565555640	chr2:186845119-186845120	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs9288119	chr2:186845158-186845159	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs181367800	chr2:186845162-186845163	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs564085979	chr2:186845177-186845178	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs185642110	chr2:186845193-186845194	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs138353438	chr2:186845268-186845269	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs112922049	chr2:186845275-186845276	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs199975759	chr2:186845293-186845294	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs190797665	chr2:186845313-186845314	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs116542166	chr2:186845377-186845378	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs115492514	chr2:186845435-186845436	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs529685071	chr2:186845446-186845447	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs374752848	chr2:186845556-186845557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs16827344	chr2:186845616-186845617	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs137963787	chr2:186845634-186845635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs143549957	chr2:186845662-186845663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs369126507	chr2:186845676-186845677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs535327882	chr2:186845730-186845731	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs547014648	chr2:186845792-186845793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs568423214	chr2:186845820-186845821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs73981939	chr2:186845823-186845824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs147131770	chr2:186845870-186845871	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs575659958	chr2:186845887-186845888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs138646536	chr2:186845888-186845889	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs74788412	chr2:186845909-186845910	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs16827345	chr2:186845934-186845935	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs540905533	chr2:186846032-186846033	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs115017331	chr2:186846048-186846049	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs181581323	chr2:186846063-186846064	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs185898411	chr2:186846075-186846076	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:50)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Ependymoma	16718352	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	16272173	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Autism	16446308	CNVD
Autism	19401682	CNVD
Colorectal cancer	16272173	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
Glioblastoma	21080181	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Facial dysmorphism	20548289	CNVD
Mental retardation	20548289	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21183584	CNVD
Sudden cardiac death	19188705	CNVD
Autism	19329560	CNVD
Urothelial carcinoma	21177765	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	20164919	CNVD

Chromatin state (count:247 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:186828400-186857400	Weak transcription	Aorta	Aorta
2	chr2:186828800-186867400	Weak transcription	Ovary	ovary
3	chr2:186843400-186844600	Enhancers	Muscle Satellite Cultured Cells	--
4	chr2:186843400-186844800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr2:186843400-186845200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr2:186843400-186845200	Enhancers	Hela-S3	cervix
7	chr2:186843400-186845400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr2:186843400-186845400	Enhancers	HMEC	breast
9	chr2:186843600-186844600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr2:186843600-186844600	Enhancers	HSMM	muscle
11	chr2:186843600-186844800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr2:186843600-186845000	Enhancers	Fetal Intestine Small	intestine
13	chr2:186843800-186844600	Enhancers	Placenta Amnion	Placenta Amnion
14	chr2:186843800-186844600	Flanking Active TSS	NHEK	skin
15	chr2:186843800-186844800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr2:186844000-186844800	Enhancers	Stomach Mucosa	stomach
17	chr2:186844400-186844800	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr2:186844600-186845200	Enhancers	NHEK	skin
19	chr2:186844600-186845600	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr2:186844600-186852000	Weak transcription	Muscle Satellite Cultured Cells	--
21	chr2:186844800-186845200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr2:186845000-186849200	Weak transcription	Fetal Intestine Small	intestine
23	chr2:186845200-186867400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr2:186846000-186846200	Enhancers	Placenta Amnion	Placenta Amnion
25	chr2:186849200-186849600	Enhancers	Fetal Intestine Small	intestine
26	chr2:186852000-186852400	Active TSS	Muscle Satellite Cultured Cells	--
27	chr2:186852400-186855600	Weak transcription	Muscle Satellite Cultured Cells	--
28	chr2:186853600-186854000	Enhancers	HepG2	liver
29	chr2:186854000-186855600	Weak transcription	HepG2	liver
30	chr2:186854200-186855800	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr2:186854600-186867200	Weak transcription	Left Ventricle	heart
32	chr2:186854800-186857200	Weak transcription	Stomach Smooth Muscle	stomach
33	chr2:186854800-186857400	Weak transcription	Liver	Liver
34	chr2:186855000-186857600	Weak transcription	Brain Hippocampus Middle	brain
35	chr2:186855400-186856000	Enhancers	ES-I3 Cell Line	embryonic stem cell
36	chr2:186855400-186857600	Weak transcription	Fetal Brain Male	brain
37	chr2:186855600-186856200	Enhancers	H1 Cell Line	embryonic stem cell
38	chr2:186855600-186856200	Enhancers	HUES48 Cell Line	embryonic stem cell
39	chr2:186855600-186856400	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr2:186855600-186856400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr2:186855600-186856400	Enhancers	Muscle Satellite Cultured Cells	--
42	chr2:186855600-186856400	Enhancers	HepG2	liver
43	chr2:186855800-186856400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr2:186855800-186856600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
45	chr2:186855800-186856600	Strong transcription	Duodenum Smooth Muscle	Duodenum
46	chr2:186856000-186856200	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
47	chr2:186856000-186856400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr2:186856000-186856400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr2:186856200-186856800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
50	chr2:186856200-186857000	Enhancers	ES-I3 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links