Variant report

Variant	nsv875756
Chromosome Location	chr2:209635009-209745017
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:393)
CpG islands
(count:183)
Chromatin interactive
region (count:12)
LncRNA
region (count:28)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:393 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr2:209685060-209685323	K562	blood:	n/a	n/a
2	ARID3A	chr2:209659058-209659506	HepG2	liver:	n/a	n/a
3	ATF2	chr2:209737301-209737657	GM12878	blood:	n/a	n/a
4	BATF	chr2:209737400-209737654	GM12878	blood:	n/a	chr2:209737513-209737524 chr2:209737496-209737506 chr2:209737495-209737506
5	BATF	chr2:209737343-209737641	GM12878	blood:	n/a	chr2:209737513-209737524 chr2:209737496-209737506 chr2:209737495-209737506
6	BCL3	chr2:209737244-209737665	GM12878	blood:	n/a	chr2:209737495-209737504
7	BRCA1	chr2:209717948-209717972	H1-hESC	embryonic stem cell:	n/a	n/a
8	CBX3	chr2:209719485-209719729	K562	blood:	n/a	n/a
9	CEBPB	chr2:209647865-209648259	MCF-7	breast:	n/a	n/a
10	CEBPB	chr2:209659134-209659415	HepG2	liver:	n/a	n/a
11	CEBPB	chr2:209663540-209663817	HepG2	liver:	n/a	n/a
12	CEBPB	chr2:209674678-209674763	K562	blood:	n/a	n/a
13	CEBPB	chr2:209695475-209695722	HepG2	liver:	n/a	n/a
14	CEBPB	chr2:209647963-209648225	H1-hESC	embryonic stem cell:	n/a	n/a
15	CEBPB	chr2:209647928-209648250	MCF-7	breast:	n/a	n/a
16	CEBPB	chr2:209737278-209737281	H1-hESC	embryonic stem cell:	n/a	n/a
17	CTCF	chr2:209685046-209685468	SK-N-SH	brain:	n/a	chr2:209685190-209685211
18	CTCF	chr2:209685120-209685270	SK-N-SH_RA	brain:	n/a	chr2:209685190-209685211
19	CTCF	chr2:209743568-209743588	Lung_OC	lung:	n/a	n/a
20	CTCF	chr2:209647980-209648130	NB4	blood:	n/a	n/a
21	CTCF	chr2:209685220-209685370	HL-60	blood:	n/a	n/a
22	CTCF	chr2:209648007-209648177	T-47D	breast:	n/a	n/a
23	CTCF	chr2:209684954-209685388	HepG2	liver:	n/a	chr2:209685190-209685211
24	CTCF	chr2:209685129-209685293	GM12878	blood:	n/a	chr2:209685190-209685211
25	CTCF	chr2:209685160-209685310	GM06990	blood:	n/a	chr2:209685190-209685211
26	CTCF	chr2:209646061-209646104	H1-hESC	embryonic stem cell:	n/a	n/a
27	CTCF	chr2:209647980-209648130	GM12868	blood:	n/a	n/a
28	CTCF	chr2:209714735-209714783	LNCaP	prostate:	n/a	n/a
29	CTCF	chr2:209714789-209714791	LNCaP	prostate:	n/a	n/a
30	CTCF	chr2:209685160-209685310	HEK293	kidney:	n/a	chr2:209685190-209685211
31	CTCF	chr2:209685140-209685290	BE2_C	brain:	n/a	chr2:209685190-209685211
32	CTCF	chr2:209685180-209685330	SAEC	small airway:	n/a	chr2:209685190-209685211
33	CTCF	chr2:209685026-209685505	HCT-116	colon:	n/a	chr2:209685190-209685211
34	CTCF	chr2:209648100-209648250	GM12869	blood:	n/a	n/a
35	CTCF	chr2:209647870-209648325	MCF-7	breast:	n/a	n/a
36	CTCF	chr2:209685133-209685192	GM13976	blood:	n/a	n/a
37	CTCF	chr2:209648020-209648170	RPTEC	kidney:	n/a	n/a
38	CTCF	chr2:209648020-209648170	HRE	kidney:	n/a	n/a
39	CTCF	chr2:209685092-209685307	A549	lung:	n/a	chr2:209685190-209685211
40	CTCF	chr2:209685140-209685290	HEEpiC	esophagus:	n/a	chr2:209685190-209685211
41	CTCF	chr2:209648000-209648150	GM12875	blood:	n/a	n/a
42	CTCF	chr2:209648029-209648209	Pancreas_OC	pancreas:	n/a	n/a
43	CTCF	chr2:209648035-209648185	HepG2	liver:	n/a	n/a
44	CTCF	chr2:209685100-209685250	RPTEC	kidney:	n/a	chr2:209685190-209685211
45	CTCF	chr2:209645980-209646130	HEEpiC	esophagus:	n/a	n/a
46	CTCF	chr2:209685080-209685230	SK-N-SH_RA	brain:	n/a	chr2:209685190-209685211
47	CTCF	chr2:209648020-209648170	HMEC	breast:	n/a	n/a
48	CTCF	chr2:209685080-209685230	BE2_C	brain:	n/a	chr2:209685190-209685211
49	CTCF	chr2:209685120-209685270	MCF-7	breast:	n/a	chr2:209685190-209685211
50	CTCF	chr2:209648060-209648210	HepG2	liver:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:209665687-209665737	SK-N-MC	brain:	n/a
2	chr2:209675250-209675300	HMEC	breast:	n/a
3	chr2:209675250-209675300	A549	lung:	n/a
4	chr2:209665687-209665737	NB4	blood:	n/a
5	chr2:209665687-209665737	HPAEpiC	pulmonary alveolar:	n/a
6	chr2:209665525-209665575	CMK	blood:	n/a
7	chr2:209665525-209665575	LNCaP	prostate:	n/a
8	chr2:209665687-209665737	PFSK-1	brain:	n/a
9	chr2:209675250-209675300	NHDF-neo	bronchial:	n/a
10	chr2:209675250-209675300	IMR90	lung:	fetal
11	chr2:209675250-209675300	HL-60	blood:	n/a
12	chr2:209675250-209675300	BJ	skin:	n/a
13	chr2:209665687-209665737	T-47D	breast:	n/a
14	chr2:209675250-209675300	HCT-116	colon:	n/a
15	chr2:209665687-209665737	HAEpiC	amniotic membrane:	n/a
16	chr2:209675250-209675300	GM19239	blood:	n/a
17	chr2:209665525-209665575	Jurkat	blood:	n/a
18	chr2:209675250-209675300	AG04450	lung:	fetal
19	chr2:209665525-209665575	HAEpiC	amniotic membrane:	n/a
20	chr2:209675250-209675300	AG09309	skin:	n/a
21	chr2:209665525-209665575	ECC-1	luminal epithelium:	n/a
22	chr2:209665525-209665575	SK-N-MC	brain:	n/a
23	chr2:209665687-209665737	HRCEpiC	kidney:	n/a
24	chr2:209675250-209675300	AoSMC	blood vessel:	n/a
25	chr2:209665525-209665575	SKMC	muscle:	n/a
26	chr2:209665525-209665575	GM12892	blood:	n/a
27	chr2:209675250-209675300	HAEpiC	amniotic membrane:	n/a
28	chr2:209675250-209675300	SAEC	small airway:	n/a
29	chr2:209675250-209675300	GM12892	blood:	n/a
30	chr2:209675250-209675300	ECC-1	luminal epithelium:	n/a
31	chr2:209665525-209665575	NHBE	bronchial:	n/a
32	chr2:209675250-209675300	H1-hESC	embryonic stem cell:	embryo
33	chr2:209665525-209665575	AG04449	skin:	fetal
34	chr2:209675250-209675300	NHBE	bronchial:	n/a
35	chr2:209665687-209665737	ovcar-3	ovarian:	n/a
36	chr2:209665525-209665575	A549	lung:	n/a
37	chr2:209665687-209665737	Hepatocyte	liver:	n/a
38	chr2:209665525-209665575	SK-N-SH	brain:	n/a
39	chr2:209675250-209675300	HRCEpiC	kidney:	n/a
40	chr2:209665525-209665575	RPTEC	kidney:	n/a
41	chr2:209665687-209665737	IMR90	lung:	fetal
42	chr2:209665525-209665575	PANC-1	pancreas:	n/a
43	chr2:209665687-209665737	GM19239	blood:	n/a
44	chr2:209675250-209675300	GM12891	blood:	n/a
45	chr2:209665525-209665575	GM12891	blood:	n/a
46	chr2:209665525-209665575	HCM	heart:	n/a
47	chr2:209665525-209665575	BJ	skin:	n/a
48	chr2:209665687-209665737	AoSMC	blood vessel:	n/a
49	chr2:209675250-209675300	ovcar-3	ovarian:	n/a
50	chr2:209675250-209675300	ProgFib	skin:	n/a

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:209522358..209523062-chr2:209647609..209648423,2	MCF-7	breast:
2	chr2:209684682..209685324-chr2:209961529..209962479,2	MCF-7	breast:
3	chr2:209736383..209738259-chr2:210013383..210015250,2	MCF-7	breast:
4	chr2:209658091..209661078-chr2:209663650..209665764,2	K562	blood:
5	chr2:209331040..209332088-chr2:209646823..209648108,3	MCF-7	breast:
6	chr2:209685011..209685630-chr2:210072613..210073438,3	MCF-7	breast:
7	chr2:209735243..209737583-chr2:209791318..209793308,2	MCF-7	breast:
8	chr17:57913918..57916820-chr2:209672762..209674556,2	MCF-7	breast:
9	chr2:209684819..209685719-chr2:210072640..210073642,4	MCF-7	breast:
10	chr2:209742377..209744690-chr2:209780738..209782515,2	MCF-7	breast:
11	chr2:209658091..209661078-chr2:209663650..209665764,2	K562	blood:
12	chr16:12332624..12333395-chr2:209658770..209659354,2	MCF-7	breast:

(count:28 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PTH2R-1	chr2:209709858-209709950	NONHSAT076650
2	lnc-PTH2R-1	chr2:209690123-209690431	NONHSAT076650
3	lnc-PTH2R-1	chr2:209688919-209689074	NONHSAT076645
4	lnc-PTH2R-1	chr2:209690123-209690431	NONHSAT076648
5	lnc-PTH2R-1	chr2:209719024-209723402	NONHSAT076649
6	lnc-PTH2R-1	chr2:209719024-209719227	NONHSAT076651
7	lnc-PTH2R-1	chr2:209674176-209674279	NONHSAT076647
8	lnc-PTH2R-1	chr2:209709858-209709950	NONHSAT076651
9	lnc-PTH2R-1	chr2:209687215-209687279	NONHSAT076649
10	lnc-PTH2R-1	chr2:209719024-209723402	NONHSAT076648
11	lnc-PTH2R-1	chr2:209719024-209723402	NONHSAT076650
12	lnc-PTH2R-1	chr2:209709855-209709950	NONHSAT076645
13	lnc-PTH2R-1	chr2:209703087-209703135	NONHSAT076651
14	lnc-PTH2R-1	chr2:209709858-209709950	NONHSAT076646
15	lnc-PTH2R-1	chr2:209709858-209709950	NONHSAT076649
16	lnc-PTH2R-1	chr2:209709858-209709950	NONHSAT147141
17	lnc-PTH2R-1	chr2:209688919-209689074	NONHSAT076648
18	lnc-PTH2R-1	chr2:209709858-209709950	NONHSAT076648
19	lnc-PTH2R-1	chr2:209719024-209720220	NONHSAT076646
20	lnc-PTH2R-1	chr2:209674170-209674289	NONHSAT076649
21	lnc-PTH2R-1	chr2:209688900-209689074	NONHSAT076650
22	lnc-PTH2R-1	chr2:209719024-209720220	NONHSAT076645
23	lnc-PTH2R-1	chr2:209719024-209719090	NONHSAT147141
24	lnc-PTH2R-1	chr2:209688919-209689074	NONHSAT076649
25	lnc-PTH2R-1	chr2:209688919-209689074	NONHSAT076646
26	lnc-PTH2R-1	chr2:209706405-209706507	NONHSAT076651
27	lnc-PTH2R-1	chr2:209706409-209706507	NONHSAT147141
28	lnc-PTH2R-1	chr2:209704710-209704818	NONHSAT076651

No data

Variant related genes	Relation type
PTH2R	TF binding region
PTH2R	CpG island
ENSG00000227430	chromatin interactions
ENSG00000062716	chromatin interactions

Extended variants
information (count: 1277 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:1277 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs536189261	chr2:209645808-209645809	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs73071875	chr2:209645850-209645851	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs566265799	chr2:209645864-209645865	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs534863380	chr2:209645878-209645879	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs17722201	chr2:209645912-209645913	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs577760195	chr2:209645933-209645934	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs537122851	chr2:209645952-209645953	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs2364688	chr2:209645956-209645957	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs182340450	chr2:209645957-209645958	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs374841678	chr2:209645965-209645966	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs16841776	chr2:209645986-209645987	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs566989471	chr2:209645991-209645992	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs149142781	chr2:209646093-209646094	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs147420342	chr2:209646105-209646106	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs367546075	chr2:209646108-209646109	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs11900872	chr2:209646135-209646136	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs564303998	chr2:209646191-209646192	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs143230332	chr2:209646203-209646204	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs549887874	chr2:209646204-209646205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs563294502	chr2:209646225-209646226	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs11900911	chr2:209646247-209646248	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs187772513	chr2:209646264-209646265	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs371776373	chr2:209646326-209646327	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs566283998	chr2:209646341-209646342	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs373968949	chr2:209646360-209646361	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs375033575	chr2:209646372-209646373	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs192528365	chr2:209646390-209646391	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs551713884	chr2:209646438-209646439	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs148332660	chr2:209646448-209646449	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs142036988	chr2:209646507-209646508	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs375551144	chr2:209646524-209646525	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs537161570	chr2:209646565-209646566	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs575669395	chr2:209646614-209646615	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs35874645	chr2:209646636-209646637	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs573704198	chr2:209646638-209646639	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs536213403	chr2:209646639-209646640	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs368479721	chr2:209646673-209646674	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs6746884	chr2:209646686-209646687	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs567211490	chr2:209646698-209646699	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs377003346	chr2:209646699-209646700	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs184375536	chr2:209646748-209646749	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs541298150	chr2:209646752-209646753	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs558229529	chr2:209646753-209646754	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs539610484	chr2:209646788-209646789	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs543545904	chr2:209646818-209646819	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs563331661	chr2:209646903-209646904	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs369653128	chr2:209646919-209646920	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs566490379	chr2:209646922-209646923	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs371571639	chr2:209646929-209646930	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs201207488	chr2:209646934-209646935	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Ependymoma	16718352	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	16272173	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Autism	16446308	CNVD
Autism	19401682	CNVD
Colorectal cancer	16272173	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Urothelial carcinoma	21177765	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Cervical cancer	21062161	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Non-small cell lung cancer	21829676	CNVD
Autism	20808228	CNVD
Renal cell carcinoma	18765545	CNVD
Ovarian cancer	19193619	CNVD
Non-small cell lung cancer	18676828	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Chordoma	18071362	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	18923514	CNVD
Schizophrenia	22241247	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Urothelial cell carcinoma	18451213	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Bipolar disorder	19114987	CNVD
Developmental delay	21147756	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:57 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:209645800-209646400	Enhancers	Fetal Heart	heart
2	chr2:209645800-209646800	Enhancers	Colon Smooth Muscle	Colon
3	chr2:209646400-209647400	Weak transcription	Fetal Heart	heart
4	chr2:209647800-209648000	Enhancers	Fetal Heart	heart
5	chr2:209649000-209649800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
6	chr2:209658400-209659400	Enhancers	HepG2	liver
7	chr2:209658600-209659000	Enhancers	Liver	Liver
8	chr2:209658600-209659400	Enhancers	Pancreatic Islets	Pancreatic Islet
9	chr2:209659000-209659400	Flanking Active TSS	Liver	Liver
10	chr2:209659400-209659600	Enhancers	Liver	Liver
11	chr2:209663000-209664000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr2:209663200-209664000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr2:209663400-209664000	Enhancers	H9 Cell Line	embryonic stem cell
14	chr2:209665200-209665800	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr2:209672000-209673000	Active TSS	A549	lung
16	chr2:209672400-209672800	Enhancers	HMEC	breast
17	chr2:209674200-209674800	Enhancers	iPS-18 Cell Line	embryonic stem cell
18	chr2:209674200-209675600	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr2:209674600-209675000	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr2:209676200-209676600	Active TSS	A549	lung
21	chr2:209684600-209685200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr2:209684600-209685400	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr2:209684600-209685400	Enhancers	Breast Myoepithelial Primary Cells	Breast
24	chr2:209684600-209685600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr2:209684600-209686200	Enhancers	Fetal Heart	heart
26	chr2:209684800-209685200	Enhancers	HUES64 Cell Line	embryonic stem cell
27	chr2:209684800-209685400	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr2:209684800-209685600	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr2:209685000-209685400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr2:209685000-209685400	Enhancers	iPS-20b Cell Line	embryonic stem cell
31	chr2:209685000-209685600	Enhancers	Pancreatic Islets	Pancreatic Islet
32	chr2:209691600-209692400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr2:209691800-209692800	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr2:209692000-209692800	Enhancers	Fetal Heart	heart
35	chr2:209692000-209692800	Enhancers	Pancreas	Pancrea
36	chr2:209692000-209692800	Enhancers	Rectal Mucosa Donor 31	rectum
37	chr2:209692000-209693000	Enhancers	HUES48 Cell Line	embryonic stem cell
38	chr2:209692400-209692800	Enhancers	Sigmoid Colon	Sigmoid Colon
39	chr2:209692800-209693800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
40	chr2:209692800-209694000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
41	chr2:209692800-209694400	Weak transcription	Rectal Mucosa Donor 31	rectum
42	chr2:209693800-209694400	Enhancers	iPS-15b Cell Line	embryonic stem cell
43	chr2:209694200-209695600	Enhancers	Rectal Mucosa Donor 29	rectum
44	chr2:209694400-209695400	Enhancers	Rectal Mucosa Donor 31	rectum
45	chr2:209710600-209713400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr2:209712400-209713400	Enhancers	HUES48 Cell Line	embryonic stem cell
47	chr2:209718200-209718600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
48	chr2:209719200-209720000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
49	chr2:209721000-209721600	Enhancers	Colon Smooth Muscle	Colon
50	chr2:209725000-209727800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links