Variant report

Variant nsv876010
Chromosome Location chr2:233801356-233839052
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:176 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:233793600-233805600 Weak transcription Liver Liver
2 chr2:233793600-233806400 Weak transcription Gastric stomach
3 chr2:233794400-233835800 Weak transcription Pancreas Pancrea
4 chr2:233794600-233806600 Weak transcription Duodenum Mucosa Duodenum
5 chr2:233797600-233802000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:233798600-233805000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:233798800-233802000 Weak transcription HepG2 liver
8 chr2:233798800-233806600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr2:233801800-233802600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:233802000-233802600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr2:233802000-233802600 Strong transcription Rectal Mucosa Donor 31 rectum
12 chr2:233802000-233802600 Enhancers A549 lung
13 chr2:233802000-233802800 Enhancers HepG2 liver
14 chr2:233802000-233803200 Enhancers K562 blood
15 chr2:233802200-233802400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
16 chr2:233802200-233802400 Enhancers Fetal Intestine Large intestine
17 chr2:233802200-233802400 Enhancers HMEC breast
18 chr2:233802200-233802400 Enhancers HSMMtube muscle
19 chr2:233802200-233802600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr2:233802200-233802600 Enhancers Placenta Amnion Placenta Amnion
21 chr2:233802200-233802800 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr2:233802600-233806600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:233802600-233837200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr2:233802800-233805000 Weak transcription HepG2 liver
25 chr2:233805000-233805800 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
26 chr2:233805000-233805800 ZNF genes & repeats HepG2 liver
27 chr2:233805800-233813800 Weak transcription HepG2 liver
28 chr2:233806400-233807200 Enhancers HMEC breast
29 chr2:233806400-233807200 Enhancers NHEK skin
30 chr2:233806600-233807000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:233806600-233807200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr2:233806600-233807200 Strong transcription Duodenum Mucosa Duodenum
33 chr2:233806600-233807200 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
34 chr2:233806800-233807000 ZNF genes & repeats Liver Liver
35 chr2:233806800-233807000 Bivalent Enhancer Left Ventricle heart
36 chr2:233806800-233807200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr2:233806800-233807200 ZNF genes & repeats Fetal Intestine Small intestine
38 chr2:233807000-233807400 Strong transcription Liver Liver
39 chr2:233807200-233822600 Weak transcription Duodenum Mucosa Duodenum
40 chr2:233807200-233826000 Weak transcription Fetal Intestine Small intestine
41 chr2:233807200-233837800 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr2:233807400-233822400 Weak transcription Liver Liver
43 chr2:233807600-233808000 Enhancers HSMMtube muscle
44 chr2:233810000-233812000 Weak transcription Gastric stomach
45 chr2:233812000-233812200 Enhancers Gastric stomach
46 chr2:233812200-233838200 Weak transcription Gastric stomach
47 chr2:233812600-233814000 Enhancers Fetal Lung lung
48 chr2:233813200-233813400 Enhancers Fetal Brain Female brain
49 chr2:233813400-233815200 Weak transcription Fetal Brain Female brain
50 chr2:233813800-233814000 Enhancers HUES6 Cell Line embryonic stem cell

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