Variant report

Variant nsv876014
Chromosome Location chr2:234495742-234545861
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234495000-234497000 Enhancers GM12878-XiMat blood
2 chr2:234496600-234497000 Enhancers Fetal Intestine Small intestine
3 chr2:234496600-234497600 Enhancers Fetal Intestine Large intestine
4 chr2:234499000-234499400 Bivalent Enhancer HepG2 liver
5 chr2:234500600-234501200 ZNF genes & repeats GM12878-XiMat blood
6 chr2:234500600-234502200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr2:234501200-234501600 Weak transcription GM12878-XiMat blood
8 chr2:234501600-234502000 Enhancers HMEC breast
9 chr2:234501600-234502200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:234501600-234502200 Flanking Active TSS GM12878-XiMat blood
11 chr2:234501600-234502600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:234502000-234502600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:234502200-234503000 Enhancers GM12878-XiMat blood
14 chr2:234502600-234502800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
15 chr2:234505600-234506200 Enhancers Esophagus oesophagus
16 chr2:234505600-234507800 Enhancers Fetal Kidney kidney
17 chr2:234505800-234507200 Enhancers Rectal Mucosa Donor 31 rectum
18 chr2:234506000-234506800 Enhancers Rectal Mucosa Donor 29 rectum
19 chr2:234506200-234507000 Enhancers A549 lung
20 chr2:234506400-234507200 Enhancers Colon Smooth Muscle Colon
21 chr2:234506400-234508000 Enhancers Liver Liver
22 chr2:234506600-234507000 Enhancers Placenta Amnion Placenta Amnion
23 chr2:234507000-234507800 Flanking Active TSS A549 lung
24 chr2:234507800-234508000 Enhancers A549 lung
25 chr2:234508000-234511000 Weak transcription Liver Liver
26 chr2:234509000-234509400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:234509000-234509400 Enhancers NHEK skin
28 chr2:234509400-234510800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr2:234511000-234511200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:234511000-234514200 Enhancers Liver Liver
31 chr2:234512000-234512800 Enhancers HepG2 liver
32 chr2:234514200-234516600 Weak transcription Liver Liver
33 chr2:234516600-234518200 Enhancers Liver Liver
34 chr2:234525600-234528200 Active TSS Rectal Mucosa Donor 29 rectum
35 chr2:234525800-234526000 Enhancers Duodenum Mucosa Duodenum
36 chr2:234525800-234526200 Enhancers Rectal Mucosa Donor 31 rectum
37 chr2:234525800-234526400 Enhancers NHEK skin
38 chr2:234526000-234526600 Flanking Active TSS Duodenum Mucosa Duodenum
39 chr2:234526200-234526600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
40 chr2:234526600-234526800 Enhancers Duodenum Mucosa Duodenum
41 chr2:234526600-234526800 Active TSS Rectal Mucosa Donor 31 rectum
42 chr2:234526800-234528800 Weak transcription Duodenum Mucosa Duodenum
43 chr2:234526800-234528800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr2:234528800-234529000 Enhancers Duodenum Mucosa Duodenum
45 chr2:234528800-234529600 Enhancers Rectal Mucosa Donor 31 rectum
46 chr2:234537800-234538000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
47 chr2:234538000-234544600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr2:234544400-234545200 Enhancers Rectal Mucosa Donor 31 rectum
49 chr2:234544600-234544800 Enhancers Duodenum Mucosa Duodenum
50 chr2:234544600-234544800 Flanking Active TSS Rectal Mucosa Donor 29 rectum

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