Variant report

Variant nsv876015
Chromosome Location chr2:234518011-234579915
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234516600-234518200 Enhancers Liver Liver
2 chr2:234525600-234528200 Active TSS Rectal Mucosa Donor 29 rectum
3 chr2:234525800-234526000 Enhancers Duodenum Mucosa Duodenum
4 chr2:234525800-234526200 Enhancers Rectal Mucosa Donor 31 rectum
5 chr2:234525800-234526400 Enhancers NHEK skin
6 chr2:234526000-234526600 Flanking Active TSS Duodenum Mucosa Duodenum
7 chr2:234526200-234526600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
8 chr2:234526600-234526800 Enhancers Duodenum Mucosa Duodenum
9 chr2:234526600-234526800 Active TSS Rectal Mucosa Donor 31 rectum
10 chr2:234526800-234528800 Weak transcription Duodenum Mucosa Duodenum
11 chr2:234526800-234528800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr2:234528800-234529000 Enhancers Duodenum Mucosa Duodenum
13 chr2:234528800-234529600 Enhancers Rectal Mucosa Donor 31 rectum
14 chr2:234537800-234538000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
15 chr2:234538000-234544600 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr2:234544400-234545200 Enhancers Rectal Mucosa Donor 31 rectum
17 chr2:234544600-234544800 Enhancers Duodenum Mucosa Duodenum
18 chr2:234544600-234544800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
19 chr2:234544600-234545000 Enhancers Colonic Mucosa Colon
20 chr2:234544800-234547600 Active TSS Duodenum Mucosa Duodenum
21 chr2:234544800-234548400 Active TSS Rectal Mucosa Donor 29 rectum
22 chr2:234545200-234545600 Active TSS Rectal Mucosa Donor 31 rectum
23 chr2:234545200-234545800 Active TSS Colonic Mucosa Colon
24 chr2:234545200-234546000 Active TSS Rectal Smooth Muscle rectum
25 chr2:234545600-234546000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
26 chr2:234545800-234547400 Weak transcription Colonic Mucosa Colon
27 chr2:234546000-234546800 Active TSS Rectal Mucosa Donor 31 rectum
28 chr2:234546800-234547200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
29 chr2:234547200-234548000 Active TSS Rectal Mucosa Donor 31 rectum
30 chr2:234547400-234547800 Active TSS Colonic Mucosa Colon
31 chr2:234547400-234547800 Enhancers NHEK skin
32 chr2:234547400-234548200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:234547400-234548200 Enhancers HMEC breast
34 chr2:234547600-234548200 Enhancers Duodenum Mucosa Duodenum
35 chr2:234547800-234554000 Weak transcription Colonic Mucosa Colon
36 chr2:234548000-234548200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
37 chr2:234548200-234548800 Enhancers Primary T killer naive cells fromperipheralblood blood
38 chr2:234548200-234549400 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr2:234548400-234549000 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr2:234549400-234550000 Enhancers Rectal Mucosa Donor 31 rectum
41 chr2:234549400-234550000 Enhancers Stomach Mucosa stomach
42 chr2:234550000-234551400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr2:234550000-234551400 Weak transcription Stomach Mucosa stomach
44 chr2:234551400-234551600 Enhancers Rectal Mucosa Donor 31 rectum
45 chr2:234551400-234551800 Enhancers Stomach Mucosa stomach
46 chr2:234551600-234551800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
47 chr2:234551600-234551800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr2:234551600-234551800 Enhancers Esophagus oesophagus
49 chr2:234551600-234553800 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr2:234551800-234559200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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