Variant report

Variant nsv876018
Chromosome Location chr2:234653938-234666461
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234620400-234659200 Weak transcription Colonic Mucosa Colon
2 chr2:234626600-234668400 Weak transcription NHEK skin
3 chr2:234646400-234666600 Weak transcription Stomach Mucosa stomach
4 chr2:234647800-234655000 Weak transcription Gastric stomach
5 chr2:234649800-234658800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr2:234652600-234654400 Enhancers Liver Liver
7 chr2:234652600-234654600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr2:234652800-234658200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr2:234652800-234659200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr2:234653200-234654400 Enhancers HepG2 liver
11 chr2:234653200-234655600 Enhancers Fetal Intestine Small intestine
12 chr2:234653800-234654200 Active TSS A549 lung
13 chr2:234654200-234654800 Enhancers Small Intestine intestine
14 chr2:234654200-234655000 Enhancers A549 lung
15 chr2:234654200-234655400 Enhancers Duodenum Mucosa Duodenum
16 chr2:234654200-234655400 Enhancers Fetal Intestine Large intestine
17 chr2:234654400-234654600 Flanking Active TSS HepG2 liver
18 chr2:234654400-234656000 Flanking Active TSS Liver Liver
19 chr2:234654600-234655800 Bivalent Enhancer HepG2 liver
20 chr2:234655000-234655200 Flanking Active TSS A549 lung
21 chr2:234655000-234655600 Enhancers Gastric stomach
22 chr2:234655200-234655400 Enhancers A549 lung
23 chr2:234655400-234655600 Flanking Active TSS A549 lung
24 chr2:234655400-234656200 Enhancers Pancreas Pancrea
25 chr2:234655600-234656200 Enhancers A549 lung
26 chr2:234656000-234656600 Enhancers Liver Liver
27 chr2:234656200-234659000 Weak transcription A549 lung
28 chr2:234656600-234657000 Flanking Active TSS Liver Liver
29 chr2:234657000-234657200 Enhancers Liver Liver
30 chr2:234657200-234657600 Flanking Active TSS Liver Liver
31 chr2:234657600-234658000 Active TSS Liver Liver
32 chr2:234658000-234658200 Flanking Active TSS Liver Liver
33 chr2:234658200-234660600 Enhancers Liver Liver
34 chr2:234658200-234664000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:234659200-234659800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr2:234659600-234660200 ZNF genes & repeats Colonic Mucosa Colon
37 chr2:234659600-234660800 ZNF genes & repeats Fetal Intestine Small intestine
38 chr2:234659800-234661800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:234660000-234666200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr2:234660200-234666400 Weak transcription Colonic Mucosa Colon
41 chr2:234660600-234663800 Weak transcription Liver Liver
42 chr2:234661400-234662000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr2:234661400-234662200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr2:234661800-234662200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr2:234661800-234664200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr2:234663600-234664000 ZNF genes & repeats A549 lung
47 chr2:234663800-234664000 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr2:234663800-234664000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
49 chr2:234663800-234664000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
50 chr2:234663800-234664000 Genic enhancers Liver Liver

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