Variant report

Variant nsv876295
Chromosome Location chr3:440028-516255
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:212 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:397600-453400 Weak transcription Brain Angular Gyrus brain
2 chr3:416200-447400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr3:421000-453600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr3:424200-453600 Weak transcription Brain Cingulate Gyrus brain
5 chr3:426000-446400 Weak transcription Adipose Nuclei Adipose
6 chr3:427600-442200 Weak transcription Brain Substantia Nigra brain
7 chr3:429000-453000 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr3:430600-451600 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr3:431600-443600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr3:431800-451400 Weak transcription Fetal Brain Female brain
11 chr3:434000-443800 Weak transcription Ovary ovary
12 chr3:434400-449400 Weak transcription Brain Germinal Matrix brain
13 chr3:434600-443400 Weak transcription Brain Anterior Caudate brain
14 chr3:438200-443400 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr3:439200-447800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr3:443400-444000 Strong transcription Brain Anterior Caudate brain
17 chr3:443400-447200 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr3:443600-445600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr3:443800-444800 Strong transcription Ovary ovary
20 chr3:444000-444400 Weak transcription Brain Anterior Caudate brain
21 chr3:444400-445000 Strong transcription Brain Anterior Caudate brain
22 chr3:444800-445000 ZNF genes & repeats Ovary ovary
23 chr3:445000-446600 Weak transcription Ovary ovary
24 chr3:445000-449600 Weak transcription Brain Anterior Caudate brain
25 chr3:445600-446800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr3:446800-448200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr3:447200-451400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr3:447800-449800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr3:448200-450000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr3:452200-452800 Active TSS Aorta Aorta
31 chr3:452800-453400 Enhancers Aorta Aorta
32 chr3:453000-453200 Enhancers Cortex derived primary cultured neurospheres brain
33 chr3:453000-453400 Enhancers Fetal Brain Male brain
34 chr3:453400-453600 Enhancers Brain Angular Gyrus brain
35 chr3:453600-453800 Bivalent Enhancer Brain Cingulate Gyrus brain
36 chr3:453600-453800 Enhancers Brain Inferior Temporal Lobe brain
37 chr3:459800-460000 Enhancers Fetal Intestine Small intestine
38 chr3:459800-460400 Enhancers Fetal Intestine Large intestine
39 chr3:460200-461200 Weak transcription Fetal Intestine Small intestine
40 chr3:460400-461200 Weak transcription Fetal Intestine Large intestine
41 chr3:461200-461400 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
42 chr3:461200-461400 Enhancers Fetal Intestine Large intestine
43 chr3:461200-461800 Enhancers Fetal Intestine Small intestine
44 chr3:465800-469400 Enhancers Hela-S3 cervix
45 chr3:466200-467600 Enhancers Cortex derived primary cultured neurospheres brain
46 chr3:466800-467200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr3:467000-467200 Enhancers Brain Germinal Matrix brain
48 chr3:467200-469000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr3:467400-468000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr3:467400-468800 Weak transcription Brain Germinal Matrix brain

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